FFCP PHASE1:Hg19::chr12:57410306..57410318,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:57410306..57410318,- to FFCP PHASE1:Hg19::chr12:57410306..57410318,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6866 | |EntrezGene=6866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11521 | |HGNC=11521 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000496757_5end | |||
|cluster_id=chr12:57410306..57410318,- | |||
|coexpression_cluster_id=C311 | |||
|description=CAGE_peak_1_at_TAC3_5end | |||
|id=chr12:57410306..57410318,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.01e-07;6!CL:0000404;2.01e-07;6!CL:0002563;2.26e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.81e-07,8;CL:0002563,2.08e-07,4;CL:0000540,2.37e-07,6;CL:0000031,2.37e-07,6;CL:0000404,2.37e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.57e-07;82!CL:0000031;2.01e-07;6!UBERON:0006241;9.24e-07;3!UBERON:0003057;9.24e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.09e-36!82;UBERON:0005743!3.37e-35!86;UBERON:0001869!8.54e-34!32;UBERON:0001049!1.38e-33!57;UBERON:0005068!1.38e-33!57;UBERON:0006241!1.38e-33!57;UBERON:0007135!1.38e-33!57;UBERON:0000073!1.92e-33!94;UBERON:0001016!1.92e-33!94;UBERON:0001893!3.81e-33!34;UBERON:0002020!6.86e-33!34;UBERON:0003528!6.86e-33!34;UBERON:0002780!9.26e-33!41;UBERON:0001890!9.26e-33!41;UBERON:0006240!9.26e-33!41;UBERON:0002791!6.17e-32!33;UBERON:0003080!1.17e-31!42;UBERON:0007023!6.20e-31!115;UBERON:0000955!6.44e-27!69;UBERON:0006238!6.44e-27!69;UBERON:0002616!1.17e-26!59;UBERON:0002619!1.95e-26!22;UBERON:0000956!2.31e-26!25;UBERON:0000203!2.31e-26!25;UBERON:0001950!2.01e-24!20;UBERON:0003075!6.34e-21!86;UBERON:0007284!6.34e-21!86;UBERON:0002346!2.73e-20!90;UBERON:0003056!6.20e-19!61;UBERON:0004121!1.75e-15!169;UBERON:0000924!2.55e-15!173;UBERON:0006601!2.55e-15!173;UBERON:0000153!9.02e-13!129;UBERON:0007811!9.02e-13!129;UBERON:0000033!2.67e-12!123;UBERON:0001871!7.59e-10!7;UBERON:0000200!1.98e-08!6;UBERON:0002420!2.45e-08!9;UBERON:0007245!2.45e-08!9;UBERON:0010009!2.45e-08!9;UBERON:0010011!2.45e-08!9;UBERON:0000454!2.45e-08!9;UBERON:0002308!5.18e-08!9;UBERON:0000125!5.18e-08!9;UBERON:0001872!3.51e-07!5;UBERON:0002021!5.46e-07!5;UBERON:0000349!9.51e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.12e-43;32!UBERON:0002619;4.43e-42;22!UBERON:0003528;6.02e-42;34!UBERON:0002020;6.02e-42;34!UBERON:0002791;9.19e-41;32!UBERON:0000956;1.79e-39;25!UBERON:0000203;1.79e-39;25!UBERON:0001893;4.28e-39;34!UBERON:0001950;9.01e-39;20!UBERON:0002780;9.42e-28;41!UBERON:0001890;9.42e-28;41!UBERON:0000073;3.16e-18;53!UBERON:0002616;3.16e-18;53!UBERON:0001017;3.92e-15;75!UBERON:0000955;4.30e-15;68!UBERON:0001871;2.86e-13;6!UBERON:0000200;9.87e-13;6!UBERON:0000160;2.05e-12;17!UBERON:0001016;1.03e-11;83!UBERON:0005409;1.08e-10;22!UBERON:0001872;1.09e-10;5!UBERON:0002021;2.11e-10;5!UBERON:0002420;2.39e-10;9!UBERON:0007245;2.39e-10;9!UBERON:0010009;2.39e-10;9!UBERON:0010011;2.39e-10;9!UBERON:0000454;2.39e-10;9!UBERON:0004907;5.42e-10;5!UBERON:0000125;5.71e-10;9!UBERON:0002308;5.71e-10;9!UBERON:0000349;6.32e-10;5!UBERON:0000369;5.26e-09;4!UBERON:0002435;5.26e-09;4!UBERON:0000204;5.26e-09;4!UBERON:0001052;2.40e-08;4!UBERON:0011216;5.89e-08;132!UBERON:0009663;2.13e-07;7!UBERON:0001242;2.26e-07;4!UBERON:0001262;2.26e-07;4!UBERON:0004786;2.26e-07;4!UBERON:0004808;2.26e-07;4!UBERON:0001277;2.26e-07;4!UBERON:0001870;2.78e-07;3!UBERON:0005383;4.41e-07;3!UBERON:0005382;4.41e-07;3!UBERON:0002240;9.24e-07;3!UBERON:0005174;9.24e-07;3!UBERON:0001137;9.24e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,7.46e-49,32;UBERON:0003528,6.35e-48,34;UBERON:0002020,6.35e-48,34;UBERON:0001893,1.71e-45,34;UBERON:0002791,3.53e-45,32;UBERON:0002619,4.16e-42,22;UBERON:0001017,8.66e-41,81;UBERON:0000956,1.34e-39,25;UBERON:0000203,1.34e-39,25;UBERON:0002780,5.33e-39,41;UBERON:0001890,5.33e-39,41;UBERON:0003080,5.33e-39,41;UBERON:0006240,5.33e-39,41;UBERON:0001950,8.12e-39,20;UBERON:0001049,8.39e-39,56;UBERON:0005068,8.39e-39,56;UBERON:0006241,8.39e-39,56;UBERON:0007135,8.39e-39,56;UBERON:0001016,4.72e-37,89;UBERON:0000073,2.77e-34,53;UBERON:0002616,2.77e-34,53;UBERON:0000955,8.87e-30,68;UBERON:0006238,8.87e-30,68;UBERON:0003056,7.23e-25,61;UBERON:0003075,1.88e-24,82;UBERON:0007284,1.88e-24,82;UBERON:0002346,3.90e-24,86;UBERON:0011216,7.74e-23,223;UBERON:0007023,7.15e-21,114;UBERON:0010371,2.07e-19,104;UBERON:0004121,2.42e-18,171;UBERON:0000924,2.42e-18,171;UBERON:0006601,2.42e-18,171;UBERON:0010314,1.13e-13,132;UBERON:0001871,2.64e-13,6;UBERON:0000200,9.92e-13,6;UBERON:0000160,1.68e-12,17;UBERON:0001872,1.04e-10,5;UBERON:0002420,1.95e-10,9;UBERON:0007245,1.95e-10,9;UBERON:0010009,1.95e-10,9;UBERON:0010011,1.95e-10,9;UBERON:0000454,1.95e-10,9;UBERON:0002021,2.14e-10,5;UBERON:0000349,5.23e-10,5;UBERON:0004907,5.76e-10,5;UBERON:0000125,5.81e-10,9;UBERON:0002308,5.81e-10,9;UBERON:0005409,3.54e-09,25;UBERON:0000369,5.07e-09,4;UBERON:0002435,5.07e-09,4;UBERON:0000204,5.07e-09,4;UBERON:0010082,5.07e-09,4;UBERON:0001052,2.52e-08,4;UBERON:0001046,8.29e-08,19;UBERON:0009663,2.08e-07,7;UBERON:0001242,2.08e-07,4;UBERON:0001262,2.08e-07,4;UBERON:0004786,2.08e-07,4;UBERON:0004808,2.08e-07,4;UBERON:0001277,2.08e-07,4;UBERON:0000025,2.17e-07,192;UBERON:0001870,2.82e-07,3;UBERON:0005383,4.24e-07,3;UBERON:0005382,4.24e-07,3 | |||
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| ||
|short_description=p1@TAC3 | |||
}} | }} |
Latest revision as of 12:35, 19 September 2015
Short description: | p1@TAC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TAC3_5end |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | 0bp_to_ENST00000496757_5end |
EntrezGene: | TAC3 |
HGNC: | 11521 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.81e-07 | 8 |
intestinal epithelial cell | 2.08e-07 | 4 |
neuron | 2.37e-07 | 6 |
neuroblast | 2.37e-07 | 6 |
electrically signaling cell | 2.37e-07 | 6 |