FFCP PHASE1:Hg19::chr22:26879714..26879733,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:26879714..26879733,-
|short_description=p3@HPS4
|description=CAGE_peak_3_at_HPS4_5end
|association_with_transcript=15bp_to_ENST00000422379_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89781 | |EntrezGene=89781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15844 | |HGNC=15844 | ||
|TSSclassifier=strong | |||
|UniProt=F1LLU8 | |UniProt=F1LLU8 | ||
|association_with_transcript=15bp_to_ENST00000422379_5end | |||
|cluster_id=chr22:26879714..26879733,- | |||
|description=CAGE_peak_3_at_HPS4_5end | |||
|id=chr22:26879714..26879733,- | |||
|ontology_enrichment_celltype=CL:0000037!1.62e-21!172;CL:0000566!1.62e-21!172;CL:0002032!2.47e-20!165;CL:0000837!2.47e-20!165;CL:0000988!2.77e-19!182;CL:0000738!3.06e-19!140;CL:0002031!2.09e-17!124;CL:0002087!1.47e-15!119;CL:0000542!7.03e-12!53;CL:0000051!7.03e-12!53;CL:0000838!1.84e-11!52;CL:0000763!1.62e-09!112;CL:0000049!1.62e-09!112;CL:0000066!4.45e-08!254;CL:0000766!9.02e-08!76;CL:0002057!1.27e-07!42;CL:0000063!4.19e-07!578;CL:0000860!5.90e-07!45;CL:0000557!7.21e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000542;5.67e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.85e-22,168;CL:0002032,1.38e-20,161;CL:0000837,1.38e-20,161;CL:0000738,3.78e-20,136;CL:0000988,8.03e-20,177;CL:0002031,9.54e-18,120;CL:0002087,9.35e-16,115;CL:0000542,1.45e-11,53;CL:0000051,1.45e-11,53;CL:0000838,4.42e-11,52;CL:0000763,6.84e-10,108;CL:0000049,6.84e-10,108;CL:0000766,1.33e-08,72;CL:0000557,2.77e-07,67;CL:0000860,4.67e-07,42;CL:0002057,4.67e-07,42;CL:0000839,7.38e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000051;5.67e-07;53 | |||
|ontology_enrichment_disease=DOID:305!3.26e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@HPS4 | |||
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Latest revision as of 12:55, 19 September 2015
Short description: | p3@HPS4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HPS4_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000422379_5end |
EntrezGene: | HPS4 |
HGNC: | 15844 |
UniProt: | F1LLU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.85e-22 | 168 |
hematopoietic oligopotent progenitor cell | 1.38e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.38e-20 | 161 |
leukocyte | 3.78e-20 | 136 |
hematopoietic cell | 8.03e-20 | 177 |
hematopoietic lineage restricted progenitor cell | 9.54e-18 | 120 |
nongranular leukocyte | 9.35e-16 | 115 |
lymphocyte | 1.45e-11 | 53 |
common lymphoid progenitor | 1.45e-11 | 53 |
lymphoid lineage restricted progenitor cell | 4.42e-11 | 52 |
myeloid cell | 6.84e-10 | 108 |
common myeloid progenitor | 6.84e-10 | 108 |
myeloid leukocyte | 1.33e-08 | 72 |
granulocyte monocyte progenitor cell | 2.77e-07 | 67 |
classical monocyte | 4.67e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.67e-07 | 42 |
myeloid lineage restricted progenitor cell | 7.38e-07 | 66 |