FFCP PHASE1:Hg19::chr3:111852019..111852029,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=257144 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20253 | |||
|TSSclassifier=strong | |||
|UniProt=F2Z3F7 | |||
|association_with_transcript=-6bp_to_ENST00000495418_5end | |||
|cluster_id=chr3:111852019..111852029,- | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_3_at_GCET2_5end | |||
|id=chr3:111852019..111852029,- | |||
|ontology_enrichment_celltype=CL:0000945!2.01e-47!24;CL:0000826!2.01e-47!24;CL:0000542!2.40e-33!53;CL:0000051!2.40e-33!53;CL:0000838!3.61e-31!52;CL:0000037!6.73e-29!172;CL:0000566!6.73e-29!172;CL:0000988!1.06e-26!182;CL:0002032!7.52e-26!165;CL:0000837!7.52e-26!165;CL:0000738!3.11e-24!140;CL:0002031!1.10e-18!124;CL:0000236!2.53e-18!14;CL:0000453!7.96e-17!5;CL:0002087!1.62e-14!119;CL:0000451!9.72e-14!10;CL:0000990!9.67e-13!8;CL:0000817!2.94e-11!3;CL:0000134!6.80e-09!358;CL:0002320!1.61e-08!365;CL:0000785!3.72e-08!2;CL:0000955!3.72e-08!2;CL:0000818!3.72e-08!2;CL:0000954!3.72e-08!2;CL:0000816!3.72e-08!2;CL:0001014!2.23e-07!2;CL:0001016!2.23e-07!2;CL:0000219!3.32e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.03e-89;24!CL:0000236;8.83e-28;13!CL:0000542;1.60e-26;53!CL:0000453;1.63e-14;5!CL:0000946;1.81e-09;1!CL:0000786;1.81e-09;1!CL:0000817;4.91e-09;1!CL:0000785;4.91e-09;1!CL:0000819;4.91e-09;1!CL:0000990;2.73e-08;8!CL:0002087;1.35e-07;104!CL:0000451;7.28e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.38e-90,24;CL:0000826,7.38e-90,24;CL:0000542,4.99e-49,53;CL:0000051,4.99e-49,53;CL:0000838,9.27e-45,52;CL:0000236,6.56e-34,14;CL:0000817,4.58e-24,3;CL:0000738,1.67e-23,136;CL:0002087,1.43e-20,115;CL:0002032,2.71e-19,161;CL:0000837,2.71e-19,161;CL:0000037,2.46e-18,168;CL:0002031,2.19e-17,120;CL:0000988,3.24e-17,177;CL:0000785,7.30e-17,2;CL:0000955,7.30e-17,2;CL:0000818,7.30e-17,2;CL:0000954,7.30e-17,2;CL:0000816,7.30e-17,2;CL:0000453,1.52e-14,5;CL:0000946,1.74e-09,1;CL:0000786,1.74e-09,1;CL:0000980,1.74e-09,1;CL:0000819,4.19e-09,1;CL:0000990,2.63e-08,8;CL:0000451,7.07e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000051;1.60e-26;53!CL:0000954;8.89e-17;2!UBERON:0001045;8.82e-09;1 | |||
|ontology_enrichment_disease=DOID:0060058!8.49e-21!10;DOID:2531!4.62e-18!51;DOID:0060083!4.62e-18!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.70e-27;10!DOID:630;2.04e-09;1!DOID:0050177;2.04e-09;1!DOID:0050427;2.04e-09;1!DOID:0060073;4.91e-09;1!DOID:8675;4.91e-09;1!DOID:12603;4.91e-09;1!DOID:2355;8.82e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.55e-27,10;DOID:2531,7.61e-11,51;DOID:0060083,7.61e-11,51;DOID:630,2.04e-09,1;DOID:0050177,2.04e-09,1;DOID:0050427,2.04e-09,1;DOID:0060073,4.19e-09,1;DOID:8675,4.19e-09,1;DOID:12603,6.22e-09,1;DOID:2355,7.27e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.64e-11!7;UBERON:0002106!4.85e-10!3;UBERON:0004854!4.85e-10!3;UBERON:0009034!4.85e-10!3;UBERON:0002095!4.85e-10!3;UBERON:0004782!4.85e-10!3;UBERON:0003281!4.85e-10!3;UBERON:0009664!4.85e-10!3;UBERON:0002296!4.85e-10!3;UBERON:0005602!4.85e-10!3;UBERON:0001179!4.85e-10!3;UBERON:0006293!4.85e-10!3;UBERON:0002384!5.23e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;8.82e-09;1!UBERON:0001153;8.82e-09;1!UBERON:0009854;8.82e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,7.85e-09,1;UBERON:0001153,7.85e-09,1;UBERON:0001045,7.85e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.49513948857586,5.66494067204626,4.64393609750708,0,0,0,0,0,0,4.26069603191659,8.38798471675787,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,2.73069305631066,0,1.28019066769952,0.800791974072025,0,1.32208974556972,3.81621501814146,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,2.04383492638291,2.16403819464667,1.20941133692304,0,0,0.383010740264733,0.211673582723883,0.324621940274555,0.280797178113459,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0,5.78498585667027,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73682183823499,0.19566461893209,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69346664131569,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,1.21792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.70234586794838,2.39156712564054,2.9441770966052,0,0,0,0.79994958341972,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44471409503885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,8.64254906668344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,22.3868189271841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.839655827868079,0.434523000071005,0,0,0,0,0,0.740872583160463,0,0,0,0,0,0,0,0,0,0,0,7.69364381527759 | |||
|short_description=p3@GCET2 | |||
}} |
Latest revision as of 13:20, 19 September 2015
Short description: | p3@GCET2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GCET2_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | -6bp_to_ENST00000495418_5end |
EntrezGene: | GCET2 |
HGNC: | 20253 |
UniProt: | F2Z3F7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.38e-90 | 24 |
pro-B cell | 7.38e-90 | 24 |
lymphocyte | 4.99e-49 | 53 |
common lymphoid progenitor | 4.99e-49 | 53 |
lymphoid lineage restricted progenitor cell | 9.27e-45 | 52 |
B cell | 6.56e-34 | 14 |
precursor B cell | 4.58e-24 | 3 |
leukocyte | 1.67e-23 | 136 |
nongranular leukocyte | 1.43e-20 | 115 |
hematopoietic oligopotent progenitor cell | 2.71e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.71e-19 | 161 |
hematopoietic stem cell | 2.46e-18 | 168 |
hematopoietic lineage restricted progenitor cell | 2.19e-17 | 120 |
hematopoietic cell | 3.24e-17 | 177 |
mature B cell | 7.30e-17 | 2 |
pre-B-II cell | 7.30e-17 | 2 |
transitional stage B cell | 7.30e-17 | 2 |
small pre-B-II cell | 7.30e-17 | 2 |
immature B cell | 7.30e-17 | 2 |
Langerhans cell | 1.52e-14 | 5 |
antibody secreting cell | 1.74e-09 | 1 |
plasma cell | 1.74e-09 | 1 |
plasmablast | 1.74e-09 | 1 |
B-1 B cell | 4.19e-09 | 1 |
conventional dendritic cell | 2.63e-08 | 8 |
dendritic cell | 7.07e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 7.85e-09 | 1 |
caecum | 7.85e-09 | 1 |
midgut | 7.85e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.55e-27 | 10 |
hematologic cancer | 7.61e-11 | 51 |
immune system cancer | 7.61e-11 | 51 |
genetic disease | 2.04e-09 | 1 |
monogenic disease | 2.04e-09 | 1 |
xeroderma pigmentosum | 2.04e-09 | 1 |
lymphatic system cancer | 4.19e-09 | 1 |
lymphosarcoma | 4.19e-09 | 1 |
acute leukemia | 6.22e-09 | 1 |
anemia | 7.27e-09 | 1 |