FFCP PHASE1:Hg19::chr1:197886561..197886569,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56956 | |EntrezGene=56956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14222 | |HGNC=14222 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQ69 | |UniProt=Q9NQ69 | ||
|association_with_transcript=32bp_to_ENST00000367387_5end | |association_with_transcript=32bp_to_ENST00000367387_5end | ||
|cluster_id=chr1:197886561..197886569,+ | |||
|coexpression_cluster_id=C2547 | |||
|description=CAGE_peak_10_at_LHX9_5end | |description=CAGE_peak_10_at_LHX9_5end | ||
|id=chr1:197886561..197886569,+ | |id=chr1:197886561..197886569,+ | ||
|ontology_enrichment_celltype=CL:0002620!7.84e-41!23;CL:0000242!9.68e-17!2;CL:0000057!2.94e-11!75;CL:0000312!3.14e-07!5;CL:0000095!6.89e-07!17;CL:0000123!6.89e-07!17 | |ontology_enrichment_celltype=CL:0002620!7.84e-41!23;CL:0000242!9.68e-17!2;CL:0000057!2.94e-11!75;CL:0000312!3.14e-07!5;CL:0000095!6.89e-07!17;CL:0000123!6.89e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0002620;7.61e-31;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,7.15e-31,23;CL:0000057,1.27e-09,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.47e-27!5;DOID:450!9.47e-27!5;DOID:66!9.47e-27!5;DOID:423!9.47e-27!5;DOID:0080000!9.47e-27!5;DOID:11722!9.47e-27!5;DOID:3371!7.98e-10!1;DOID:4549!7.98e-10!1;DOID:5861!7.98e-10!1;DOID:6496!7.98e-10!1;DOID:2513!3.53e-09!1 | |ontology_enrichment_disease=DOID:17!9.47e-27!5;DOID:450!9.47e-27!5;DOID:66!9.47e-27!5;DOID:423!9.47e-27!5;DOID:0080000!9.47e-27!5;DOID:11722!9.47e-27!5;DOID:3371!7.98e-10!1;DOID:4549!7.98e-10!1;DOID:5861!7.98e-10!1;DOID:6496!7.98e-10!1;DOID:2513!3.53e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:3371;7.48e-30;1!DOID:4549;7.48e-30;1!DOID:5861;7.48e-30;1!DOID:6496;7.48e-30;1!DOID:17;1.14e-23;5!DOID:450;1.14e-23;5!DOID:66;1.14e-23;5!DOID:423;1.14e-23;5!DOID:0080000;1.14e-23;5!DOID:11722;1.14e-23;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.48e-30,1;DOID:4549,7.48e-30,1;DOID:5861,7.48e-30,1;DOID:6496,7.48e-30,1;DOID:17,1.02e-23,5;DOID:450,1.02e-23,5;DOID:66,1.02e-23,5;DOID:423,1.02e-23,5;DOID:0080000,1.02e-23,5;DOID:11722,1.02e-23,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!6.24e-37!40;UBERON:0002199!1.47e-32!45;UBERON:0002416!1.47e-32!45;UBERON:0003102!4.10e-14!95;UBERON:0007195!1.03e-09!1;UBERON:0001000!3.00e-09!1;UBERON:0005352!3.00e-09!1 | |ontology_enrichment_uberon=UBERON:0002097!6.24e-37!40;UBERON:0002199!1.47e-32!45;UBERON:0002416!1.47e-32!45;UBERON:0003102!4.10e-14!95;UBERON:0007195!1.03e-09!1;UBERON:0001000!3.00e-09!1;UBERON:0005352!3.00e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.33e-29;1!UBERON:0002097;1.24e-13;41!UBERON:0002418;6.73e-11;3!UBERON:0004755;6.73e-11;3!UBERON:0002199;6.06e-10;46!UBERON:0002416;6.06e-10;46!UBERON:0003102;6.19e-10;50!UBERON:0001474;2.52e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.78e-29,1;UBERON:0002097,1.55e-17,41;UBERON:0002199,1.12e-15,46;UBERON:0002416,1.12e-15,46;UBERON:0002418,6.73e-11,3;UBERON:0004755,6.73e-11,3;UBERON:0003102,1.90e-07,99 | |||
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|short_description=p10@LHX9 | |short_description=p10@LHX9 | ||
}} | }} |
Latest revision as of 13:26, 19 September 2015
Short description: | p10@LHX9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LHX9_5end |
Coexpression cluster: | C2547_extraskeletal_Fibroblast_glioblastoma_Sertoli_mesothelioma_hepatoma_neuroepithelioma |
Association with transcript: | 32bp_to_ENST00000367387_5end |
EntrezGene: | LHX9 |
HGNC: | 14222 |
UniProt: | Q9NQ69 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 7.15e-31 | 23 |
fibroblast | 1.27e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.78e-29 | 1 |
skin of body | 1.55e-17 | 41 |
integument | 1.12e-15 | 46 |
integumental system | 1.12e-15 | 46 |
cartilage tissue | 6.73e-11 | 3 |
skeletal tissue | 6.73e-11 | 3 |
surface structure | 1.90e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.48e-30 | 1 |
extraosseous chondrosarcoma | 7.48e-30 | 1 |
myxoid chondrosarcoma | 7.48e-30 | 1 |
extraskeletal myxoid chondrosarcoma | 7.48e-30 | 1 |
musculoskeletal system disease | 1.02e-23 | 5 |
myotonic disease | 1.02e-23 | 5 |
muscle tissue disease | 1.02e-23 | 5 |
myopathy | 1.02e-23 | 5 |
muscular disease | 1.02e-23 | 5 |
myotonic dystrophy | 1.02e-23 | 5 |