FFCP PHASE1:Hg19::chr11:66056564..66056579,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10897 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16688 | |||
|TSSclassifier=strong | |||
|UniProt=E9PP02,E9PK42 | |||
|association_with_transcript=19bp_to_ENST00000471387,ENST00000484814_5end | |||
|cluster_id=chr11:66056564..66056579,- | |||
|coexpression_cluster_id=C562 | |||
|description=CAGE_peak_2_at_YIF1A_5end | |||
|id=chr11:66056564..66056579,- | |||
|ontology_enrichment_celltype=CL:0000055!4.20e-41!180;CL:0000548!5.35e-23!679;CL:0000004!5.35e-23!679;CL:0000255!5.35e-23!679;CL:0000183!1.17e-22!59;CL:0000680!1.69e-22!57;CL:0000056!1.69e-22!57;CL:0000355!1.69e-22!57;CL:0000220!5.19e-22!246;CL:0000012!6.88e-22!682;CL:0002321!7.18e-22!248;CL:0000187!2.96e-21!54;CL:0000192!7.14e-21!42;CL:0000514!7.14e-21!42;CL:0000393!3.55e-20!60;CL:0000211!3.55e-20!60;CL:0000222!6.86e-19!119;CL:0000144!7.17e-18!625;CL:0000359!2.83e-17!32;CL:0000057!3.93e-17!75;CL:0002371!1.15e-15!591;CL:0000003!7.09e-10!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.65e-16;32!CL:0000192;4.48e-14;43!CL:0000187;1.24e-11;55!CL:0000393;7.74e-10;61!CL:0000211;7.74e-10;61!CL:0000134;3.21e-08;55!CL:0000057;6.60e-08;73!CL:0000723;3.23e-07;61!CL:0000048;4.13e-07;58!CL:0002320;7.11e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.41e-22,250;CL:0000680,9.15e-22,58;CL:0000056,9.15e-22,58;CL:0000355,9.15e-22,58;CL:0000187,1.60e-20,55;CL:0000192,5.31e-20,43;CL:0000514,5.31e-20,43;CL:0000393,1.59e-19,61;CL:0000211,1.59e-19,61;CL:0000222,9.18e-19,121;CL:0000057,1.82e-17,76;CL:0000359,2.65e-17,32 | |||
|ontology_enrichment_development_v019=CL:0000514;4.48e-14;43!CL:0000355;1.73e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.99e-23!83;UBERON:0002329!1.99e-23!83;UBERON:0003077!1.99e-23!83;UBERON:0003059!1.99e-23!83;UBERON:0007282!1.99e-23!83;UBERON:0009618!1.99e-23!83;UBERON:0007285!1.99e-23!83;UBERON:0005256!3.39e-23!143;UBERON:0004290!1.48e-22!70;UBERON:0002100!4.82e-22!216;UBERON:0000486!5.40e-21!82;UBERON:0001134!3.57e-19!61;UBERON:0002036!3.57e-19!61;UBERON:0003082!3.57e-19!61;UBERON:0002385!6.64e-18!63;UBERON:0001015!6.64e-18!63;UBERON:0000383!6.64e-18!63;UBERON:0000490!1.13e-17!138;UBERON:0003914!4.74e-17!118;UBERON:0003104!1.32e-16!238;UBERON:0009142!1.32e-16!238;UBERON:0001637!6.65e-16!42;UBERON:0003509!6.65e-16!42;UBERON:0004572!6.65e-16!42;UBERON:0002049!1.62e-15!79;UBERON:0007798!1.62e-15!79;UBERON:0000475!2.89e-15!365;UBERON:0004872!1.95e-14!84;UBERON:0000055!2.31e-13!69;UBERON:0001981!3.26e-13!60;UBERON:0007500!3.26e-13!60;UBERON:0004537!3.26e-13!60;UBERON:0006965!3.26e-13!60;UBERON:0004573!1.62e-12!33;UBERON:0004571!1.62e-12!33;UBERON:0000119!4.26e-12!312;UBERON:0000483!9.63e-12!309;UBERON:0000481!2.03e-11!347;UBERON:0004535!7.81e-10!110;UBERON:0001009!2.95e-09!113;UBERON:0009569!3.64e-09!113;UBERON:0002199!9.56e-09!45;UBERON:0002416!9.56e-09!45;UBERON:0000477!2.65e-08!286;UBERON:0000468!1.38e-07!659;UBERON:0002097!4.97e-07!40;UBERON:0003102!8.04e-07!95;UBERON:0001013!9.45e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.50e-11;33!UBERON:0004571;4.50e-11;33!UBERON:0001637;6.42e-11;42!UBERON:0003509;6.42e-11;42!UBERON:0004572;6.42e-11;42!UBERON:0007500;2.55e-08;56!UBERON:0001981;2.55e-08;56!UBERON:0004537;2.55e-08;56!UBERON:0003914;4.65e-07;74!UBERON:0002049;6.39e-07;75!UBERON:0007798;6.39e-07;75!UBERON:0001013;8.09e-07;14!UBERON:0000055;8.33e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.69e-24,78;UBERON:0005256,2.69e-22,122;UBERON:0002329,5.40e-22,71;UBERON:0003059,5.40e-22,71;UBERON:0007282,5.40e-22,71;UBERON:0004290,5.40e-22,71;UBERON:0009618,5.40e-22,71;UBERON:0003104,5.80e-22,160;UBERON:0009142,5.80e-22,160;UBERON:0007524,1.00e-21,73;UBERON:0003077,2.72e-21,72;UBERON:0007285,2.72e-21,72;UBERON:0002100,1.07e-20,199;UBERON:0000486,1.59e-20,83;UBERON:0000490,1.94e-20,148;UBERON:0001134,1.27e-18,62;UBERON:0002036,1.27e-18,62;UBERON:0003082,1.27e-18,62;UBERON:0003914,1.60e-17,117;UBERON:0002385,2.42e-17,64;UBERON:0001015,2.42e-17,64;UBERON:0000383,2.42e-17,64;UBERON:0001637,6.27e-16,42;UBERON:0003509,6.27e-16,42;UBERON:0004572,6.27e-16,42;UBERON:0002049,3.03e-15,78;UBERON:0007798,3.03e-15,78;UBERON:0004872,4.33e-14,83;UBERON:0000119,3.20e-13,309;UBERON:0000055,4.31e-13,68;UBERON:0007500,6.13e-13,59;UBERON:0001981,6.13e-13,59;UBERON:0004537,6.13e-13,59;UBERON:0006965,6.13e-13,59;UBERON:0000483,7.50e-13,306;UBERON:0004573,1.55e-12,33;UBERON:0004571,1.55e-12,33;UBERON:0004535,8.11e-10,109;UBERON:0001009,3.08e-09,112;UBERON:0002199,5.05e-09,46;UBERON:0002416,5.05e-09,46;UBERON:0009569,6.88e-09,112;UBERON:0003102,2.26e-07,99;UBERON:0002097,2.70e-07,41;UBERON:0001013,9.25e-07,14 | |||
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| |||
|short_description=p2@YIF1A | |||
}} |
Latest revision as of 13:40, 19 September 2015
Short description: | p2@YIF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_YIF1A_5end |
Coexpression cluster: | C562_Smooth_Fibroblast_Preadipocyte_Hepatic_Alveolar_Adipocyte_Mesenchymal |
Association with transcript: | 19bp_to_ENST00000471387, ENST00000484814_5end |
EntrezGene: | YIF1A |
HGNC: | 16688 |
UniProt: | E9PP02E9PK42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.41e-22 | 250 |
muscle precursor cell | 9.15e-22 | 58 |
myoblast | 9.15e-22 | 58 |
multi-potent skeletal muscle stem cell | 9.15e-22 | 58 |
muscle cell | 1.60e-20 | 55 |
smooth muscle cell | 5.31e-20 | 43 |
smooth muscle myoblast | 5.31e-20 | 43 |
electrically responsive cell | 1.59e-19 | 61 |
electrically active cell | 1.59e-19 | 61 |
mesodermal cell | 9.18e-19 | 121 |
fibroblast | 1.82e-17 | 76 |
vascular associated smooth muscle cell | 2.65e-17 | 32 |