FFCP PHASE1:Hg19::chr6:10529918..10529924,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2651 | |EntrezGene=2651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |HGNC=4204 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-105bp_to_ENST00000485764_5end | |association_with_transcript=-105bp_to_ENST00000485764_5end | ||
|cluster_id=chr6:10529918..10529924,+ | |||
|coexpression_cluster_id=C80 | |coexpression_cluster_id=C80 | ||
|description=CAGE_peak_31_at_GCNT2_5end | |description=CAGE_peak_31_at_GCNT2_5end | ||
|id=chr6:10529918..10529924,+ | |id=chr6:10529918..10529924,+ | ||
|ontology_enrichment_celltype=CL:0000453!6.62e-32!5;CL:0000990!1.17e-17!8;CL:0000451!2.08e-14!10;CL:0001014!4.27e-14!2;CL:0001016!4.27e-14!2;CL:0002566!1.25e-07!1;CL:0000319!1.42e-07!1 | |ontology_enrichment_celltype=CL:0000453!6.62e-32!5;CL:0000990!1.17e-17!8;CL:0000451!2.08e-14!10;CL:0001014!4.27e-14!2;CL:0001016!4.27e-14!2;CL:0002566!1.25e-07!1;CL:0000319!1.42e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0001014;3.29e-195;2!CL:0001016;3.29e-195;2!CL:0000453;3.49e-79;5!CL:0000840;2.83e-66;5!CL:0000990;9.75e-45;8!CL:0000451;6.80e-37;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.29e-195,2;CL:0001016,3.29e-195,2;CL:0000453,3.49e-79,5;CL:0000840,2.83e-66,5;CL:0001029,2.83e-66,5;CL:0000990,9.75e-45,8;CL:0000451,6.80e-37,10;CL:0002009,1.20e-07,61;CL:0000557,4.47e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3030!1.42e-07!1 | |ontology_enrichment_disease=DOID:3030!1.42e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000989!8.54e-08!1;UBERON:0008811!8.54e-08!1;UBERON:0006258!8.54e-08!1;UBERON:0005876!8.54e-08!1;UBERON:0004874!8.54e-08!1 | |ontology_enrichment_uberon=UBERON:0000989!8.54e-08!1;UBERON:0008811!8.54e-08!1;UBERON:0006258!8.54e-08!1;UBERON:0005876!8.54e-08!1;UBERON:0004874!8.54e-08!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p31@GCNT2 | |short_description=p31@GCNT2 | ||
}} | }} |
Latest revision as of 13:42, 19 September 2015
Short description: | p31@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_GCNT2_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -105bp_to_ENST00000485764_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.29e-195 | 2 |
immature CD1a-positive Langerhans cell | 3.29e-195 | 2 |
Langerhans cell | 3.49e-79 | 5 |
immature conventional dendritic cell | 2.83e-66 | 5 |
common dendritic progenitor | 2.83e-66 | 5 |
conventional dendritic cell | 9.75e-45 | 8 |
dendritic cell | 6.80e-37 | 10 |
macrophage dendritic cell progenitor | 1.20e-07 | 61 |
granulocyte monocyte progenitor cell | 4.47e-07 | 67 |