FFCP PHASE1:Hg19::chr12:57648281..57648283,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22864 | |EntrezGene=22864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29167 | |HGNC=29167 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P1N3 | |UniProt=Q9P1N3 | ||
|association_with_transcript=441bp_to_AF113695_5end | |association_with_transcript=441bp_to_AF113695_5end | ||
|cluster_id=chr12:57648281..57648283,- | |||
|description=CAGE_peak_4_at_R3HDM2_5end | |description=CAGE_peak_4_at_R3HDM2_5end | ||
|id=chr12:57648281..57648283,- | |id=chr12:57648281..57648283,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.52e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.67e-08,41;UBERON:0001890,1.67e-08,41;UBERON:0003080,1.67e-08,41;UBERON:0006240,1.67e-08,41;UBERON:0007023,7.48e-08,114;UBERON:0001049,9.80e-08,56;UBERON:0005068,9.80e-08,56;UBERON:0006241,9.80e-08,56;UBERON:0007135,9.80e-08,56;UBERON:0000073,1.67e-07,53;UBERON:0002616,1.67e-07,53;UBERON:0000955,3.65e-07,68;UBERON:0006238,3.65e-07,68;UBERON:0003528,5.04e-07,34;UBERON:0002020,5.04e-07,34 | |||
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| ||
|short_description=p4@R3HDM2 | |short_description=p4@R3HDM2 | ||
}} | }} |
Latest revision as of 14:00, 19 September 2015
Short description: | p4@R3HDM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_R3HDM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 441bp_to_AF113695_5end |
EntrezGene: | R3HDM2 |
HGNC: | 29167 |
UniProt: | Q9P1N3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 1.67e-08 | 41 |
forebrain | 1.67e-08 | 41 |
anterior neural tube | 1.67e-08 | 41 |
future forebrain | 1.67e-08 | 41 |
adult organism | 7.48e-08 | 114 |
neural tube | 9.80e-08 | 56 |
neural rod | 9.80e-08 | 56 |
future spinal cord | 9.80e-08 | 56 |
neural keel | 9.80e-08 | 56 |
regional part of nervous system | 1.67e-07 | 53 |
regional part of brain | 1.67e-07 | 53 |
brain | 3.65e-07 | 68 |
future brain | 3.65e-07 | 68 |
brain grey matter | 5.04e-07 | 34 |
gray matter | 5.04e-07 | 34 |