FFCP PHASE1:Hg19::chr6:10585950..10585967,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:10585950..10585967,+
|short_description=p15@GCNT2
|description=CAGE_peak_15_at_GCNT2_5end
|association_with_transcript=-11bp_to_ENST00000265012_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2651 | |EntrezGene=2651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |HGNC=4204 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NFS9 | |UniProt=Q8NFS9 | ||
|association_with_transcript=-11bp_to_ENST00000265012_5end | |||
|cluster_id=chr6:10585950..10585967,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_15_at_GCNT2_5end | |||
|id=chr6:10585950..10585967,+ | |||
|ontology_enrichment_celltype=CL:0000039!3.13e-09!7;CL:0000586!3.13e-09!7;CL:0002605!5.23e-09!3;CL:0002322!2.50e-08!5;CL:0000764!4.89e-07!2;CL:0000765!4.89e-07!2;CL:0000050!4.89e-07!2;CL:0000038!4.89e-07!2;CL:0000558!4.89e-07!2;CL:0000547!4.89e-07!2;CL:0000549!4.89e-07!2;CL:0000550!4.89e-07!2;CL:0000552!4.89e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.13e-19;2!CL:0000558;3.13e-19;2!CL:0002605;2.52e-12;3!CL:0002566;7.22e-10;1!CL:0002319;8.24e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.13e-19,2;CL:0000765,3.13e-19,2;CL:0000050,3.13e-19,2;CL:0000038,3.13e-19,2;CL:0000558,3.13e-19,2;CL:0000547,3.13e-19,2;CL:0000549,3.13e-19,2;CL:0000550,3.13e-19,2;CL:0000552,3.13e-19,2;CL:0002605,1.59e-12,3;CL:0000047,2.62e-10,8;CL:0002566,1.07e-09,1;CL:0002319,6.98e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.59e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-29!115;UBERON:0002791!6.62e-27!33;UBERON:0002020!4.95e-26!34;UBERON:0003528!4.95e-26!34;UBERON:0001893!5.71e-26!34;UBERON:0001869!3.43e-25!32;UBERON:0001017!6.58e-22!82;UBERON:0001049!8.11e-22!57;UBERON:0005068!8.11e-22!57;UBERON:0006241!8.11e-22!57;UBERON:0007135!8.11e-22!57;UBERON:0000956!7.17e-21!25;UBERON:0000203!7.17e-21!25;UBERON:0002616!7.47e-21!59;UBERON:0002780!1.11e-20!41;UBERON:0001890!1.11e-20!41;UBERON:0006240!1.11e-20!41;UBERON:0005743!1.63e-20!86;UBERON:0003080!4.57e-20!42;UBERON:0000955!3.47e-18!69;UBERON:0006238!3.47e-18!69;UBERON:0000073!8.22e-18!94;UBERON:0001016!8.22e-18!94;UBERON:0003075!4.81e-16!86;UBERON:0007284!4.81e-16!86;UBERON:0002619!3.71e-15!22;UBERON:0002346!5.26e-15!90;UBERON:0001950!2.66e-14!20;UBERON:0000178!4.17e-14!15;UBERON:0000179!4.17e-14!15;UBERON:0000463!4.17e-14!15;UBERON:0001872!3.06e-12!5;UBERON:0003056!3.13e-12!61;UBERON:0004121!5.64e-08!169;UBERON:0000924!1.29e-07!173;UBERON:0006601!1.29e-07!173;UBERON:0000033!1.96e-07!123;UBERON:0000153!8.11e-07!129;UBERON:0007811!8.11e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.17e-36;15!UBERON:0000179;1.17e-36;15!UBERON:0000463;1.17e-36;15!UBERON:0002390;1.90e-15;32!UBERON:0002146;7.22e-10;1!UBERON:0005623;7.22e-10;1!UBERON:0002193;9.88e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.05e-37,15;UBERON:0000179,9.05e-37,15;UBERON:0000463,9.05e-37,15;UBERON:0002146,9.82e-10,1;UBERON:0005623,9.82e-10,1;UBERON:0007023,3.84e-09,114;UBERON:0001009,1.04e-07,112 | |||
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| ||
|short_description=p15@GCNT2 | |||
}} | }} |
Latest revision as of 14:21, 19 September 2015
Short description: | p15@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_GCNT2_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -11bp_to_ENST00000265012_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | Q8NFS9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.13e-19 | 2 |
erythroblast | 3.13e-19 | 2 |
megakaryocyte-erythroid progenitor cell | 3.13e-19 | 2 |
erythroid progenitor cell | 3.13e-19 | 2 |
reticulocyte | 3.13e-19 | 2 |
proerythroblast | 3.13e-19 | 2 |
basophilic erythroblast | 3.13e-19 | 2 |
polychromatophilic erythroblast | 3.13e-19 | 2 |
orthochromatic erythroblast | 3.13e-19 | 2 |
astrocyte of the cerebral cortex | 1.59e-12 | 3 |
neuronal stem cell | 2.62e-10 | 8 |
dark melanocyte | 1.07e-09 | 1 |
neural cell | 6.98e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
blood | 9.05e-37 | 15 |
haemolymphatic fluid | 9.05e-37 | 15 |
organism substance | 9.05e-37 | 15 |
pulmonary valve | 9.82e-10 | 1 |
semi-lunar valve | 9.82e-10 | 1 |
adult organism | 3.84e-09 | 114 |
circulatory system | 1.04e-07 | 112 |