FFCP PHASE1:Hg19::chr7:76911622..76911634,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57639 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29296 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=6bp_to_ENST00000461259,uc003ugc.2_5end | |||
|cluster_id=chr7:76911622..76911634,+ | |||
|coexpression_cluster_id=C224 | |||
|description=CAGE_peak_7_at_CCDC146_5end | |||
|id=chr7:76911622..76911634,+ | |||
|ontology_enrichment_celltype=CL:0002541!3.28e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.04e-34;2!UBERON:0005795;6.56e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;3.61e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.61e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.32e-11!115;UBERON:0002046!2.11e-09!5;UBERON:0004117!2.11e-09!5;UBERON:0007689!2.11e-09!5;UBERON:0007123!2.11e-09!5;UBERON:0003091!2.11e-09!5;UBERON:0005795!2.91e-07!22;UBERON:0000476!3.28e-07!3;UBERON:0000920!3.28e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;2.39e-66;1!UBERON:0005795;4.66e-66;1!UBERON:0006947;3.27e-23;3!UBERON:0004054;3.27e-23;3!UBERON:0005904;8.69e-18;4!UBERON:0002050;1.83e-14;5!UBERON:0005423;1.83e-14;5!UBERON:0000058;6.13e-08;10!UBERON:0003135;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.39e-66,1;UBERON:0006947,3.27e-23,3;UBERON:0004054,3.27e-23,3;UBERON:0005904,8.69e-18,4;UBERON:0005103,1.35e-09,8;UBERON:0000083,1.35e-09,8;UBERON:0009201,1.35e-09,8;UBERON:0006553,1.35e-09,8;UBERON:0003074,1.35e-09,8;UBERON:0003060,1.35e-09,8;UBERON:0000080,1.12e-08,9;UBERON:0002120,1.12e-08,9;UBERON:0004875,1.12e-08,9;UBERON:0005721,1.12e-08,9;UBERON:0005754,1.12e-08,9;UBERON:0007297,1.12e-08,9;UBERON:0003135,2.47e-07,11;UBERON:0004876,2.47e-07,11;UBERON:0003887,7.92e-07,12 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,10.6101325303446,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0,3.14508002835654,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.9164274741762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.213233981900981,0,0,0,0.224263725161227,0.763765899337979,0.404234377916439,0,0.684466602170562,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,1.22068853494722,0,0,0 | |||
|short_description=p7@CCDC146 | |||
}} |
Latest revision as of 14:29, 19 September 2015
Short description: | p7@CCDC146 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CCDC146_5end |
Coexpression cluster: | C224_clear_serous_pleomorphic_choriocarcinoma_mesothelioma_amniotic_renal |
Association with transcript: | 6bp_to_ENST00000461259, uc003ugc.2_5end |
EntrezGene: | CCDC146 |
HGNC: | 29296 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 2.39e-66 | 1 |
male genital duct | 3.27e-23 | 3 |
internal male genitalia | 3.27e-23 | 3 |
duct of male reproductive system | 8.69e-18 | 4 |
mesonephric epithelium | 1.35e-09 | 8 |
mesonephric tubule | 1.35e-09 | 8 |
nephric duct | 1.35e-09 | 8 |
renal duct | 1.35e-09 | 8 |
mesonephric duct | 1.35e-09 | 8 |
pronephric duct | 1.35e-09 | 8 |
mesonephros | 1.12e-08 | 9 |
pronephros | 1.12e-08 | 9 |
nephrogenic cord | 1.12e-08 | 9 |
pronephric mesoderm | 1.12e-08 | 9 |
rostral part of nephrogenic cord | 1.12e-08 | 9 |
presumptive pronephric mesoderm | 1.12e-08 | 9 |
male reproductive organ | 2.47e-07 | 11 |
urogenital ridge | 2.47e-07 | 11 |
intraembryonic coelom | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.61e-34 | 2 |