FFCP PHASE1:Hg19::chr1:89149914..89149995,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5586 | |EntrezGene=5586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9406 | |HGNC=9406 | ||
|TSSclassifier=strong | |||
|UniProt=E9PES5,Q16513,B1AL79 | |UniProt=E9PES5,Q16513,B1AL79 | ||
|association_with_transcript=0bp_to_ENST00000370505,NM_006256,uc001dmm.1,uc001dmn.2,uc009wcv.2,uc010osp.1,uc010osq.1_5end | |association_with_transcript=0bp_to_ENST00000370505,NM_006256,uc001dmm.1,uc001dmn.2,uc009wcv.2,uc010osp.1,uc010osq.1_5end | ||
|cluster_id=chr1:89149914..89149995,+ | |||
|coexpression_cluster_id=C468 | |coexpression_cluster_id=C468 | ||
|description=CAGE_peak_1_at_PKN2_5end | |description=CAGE_peak_1_at_PKN2_5end | ||
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|ontology_enrichment_celltype=CL:0000738!1.72e-10!140;CL:0000766!1.01e-09!76;CL:0002057!1.79e-09!42;CL:0000860!2.63e-09!45;CL:0000037!3.40e-09!172;CL:0000566!3.40e-09!172;CL:0002032!3.45e-08!165;CL:0000837!3.45e-08!165;CL:0000763!5.23e-08!112;CL:0000049!5.23e-08!112;CL:0000839!9.19e-08!70;CL:0002031!9.62e-08!124;CL:0000557!1.35e-07!71;CL:0002087!4.23e-07!119 | |ontology_enrichment_celltype=CL:0000738!1.72e-10!140;CL:0000766!1.01e-09!76;CL:0002057!1.79e-09!42;CL:0000860!2.63e-09!45;CL:0000037!3.40e-09!172;CL:0000566!3.40e-09!172;CL:0002032!3.45e-08!165;CL:0000837!3.45e-08!165;CL:0000763!5.23e-08!112;CL:0000049!5.23e-08!112;CL:0000839!9.19e-08!70;CL:0002031!9.62e-08!124;CL:0000557!1.35e-07!71;CL:0002087!4.23e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.73e-07;33!CL:0002057;5.73e-07;33 | |ontology_enrichment_celltype_v019=CL:0000860;5.73e-07;33!CL:0002057;5.73e-07;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.22e-10,136;CL:0000766,1.03e-09,72;CL:0000860,1.79e-09,42;CL:0002057,1.79e-09,42;CL:0000037,4.66e-09,168;CL:0002032,4.70e-08,161;CL:0000837,4.70e-08,161;CL:0000763,6.62e-08,108;CL:0000049,6.62e-08,108;CL:0000839,1.00e-07,66;CL:0002031,1.25e-07,120;CL:0000557,1.49e-07,67;CL:0002087,5.50e-07,115;CL:0000473,7.36e-07,48;CL:0000234,7.36e-07,48;CL:0000988,8.64e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.78e-07;42 | |ontology_enrichment_development_v019=CL:0002057;6.78e-07;42 | ||
|ontology_enrichment_disease=DOID:0050687!4.67e-08!143 | |ontology_enrichment_disease=DOID:0050687!4.67e-08!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.67e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.87e-09!115;UBERON:0002390!2.31e-08!102;UBERON:0003061!2.31e-08!102;UBERON:0002193!1.54e-07!112 | |ontology_enrichment_uberon=UBERON:0007023!5.87e-09!115;UBERON:0002390!2.31e-08!102;UBERON:0003061!2.31e-08!102;UBERON:0002193!1.54e-07!112 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.81e-09,114;UBERON:0002390,2.83e-08,98;UBERON:0003061,2.83e-08,98;UBERON:0002193,1.96e-07,108 | |||
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|short_description=p1@PKN2 | |short_description=p1@PKN2 | ||
}} | }} |
Latest revision as of 15:40, 19 September 2015
Short description: | p1@PKN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PKN2_5end |
Coexpression cluster: | C468_Neutrophils_Eosinophils_cerebellum_occipital_Whole_temporal_parietal |
Association with transcript: | 0bp_to_ENST00000370505, NM_006256, uc001dmm.1, uc001dmn.2, uc009wcv.2, uc010osp.1, uc010osq.1_5end |
EntrezGene: | PKN2 |
HGNC: | 9406 |
UniProt: | E9PES5Q16513B1AL79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.22e-10 | 136 |
myeloid leukocyte | 1.03e-09 | 72 |
classical monocyte | 1.79e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.79e-09 | 42 |
hematopoietic stem cell | 4.66e-09 | 168 |
hematopoietic oligopotent progenitor cell | 4.70e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.70e-08 | 161 |
myeloid cell | 6.62e-08 | 108 |
common myeloid progenitor | 6.62e-08 | 108 |
myeloid lineage restricted progenitor cell | 1.00e-07 | 66 |
hematopoietic lineage restricted progenitor cell | 1.25e-07 | 120 |
granulocyte monocyte progenitor cell | 1.49e-07 | 67 |
nongranular leukocyte | 5.50e-07 | 115 |
defensive cell | 7.36e-07 | 48 |
phagocyte | 7.36e-07 | 48 |
hematopoietic cell | 8.64e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.81e-09 | 114 |
hematopoietic system | 2.83e-08 | 98 |
blood island | 2.83e-08 | 98 |
hemolymphoid system | 1.96e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.67e-08 | 143 |