FFCP PHASE1:Hg19::chr7:80276114..80276144,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=948 | |EntrezGene=948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1663 | |HGNC=1663 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=57bp_to_AB590184,CU678951,DQ893062,DQ896314_5end | |association_with_transcript=57bp_to_AB590184,CU678951,DQ893062,DQ896314_5end | ||
|cluster_id=chr7:80276114..80276144,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_20_at_CD36_5end | |description=CAGE_peak_20_at_CD36_5end | ||
|id=chr7:80276114..80276144,+ | |id=chr7:80276114..80276144,+ | ||
|ontology_enrichment_celltype=CL:0000763!1.26e-13!112;CL:0000049!1.26e-13!112;CL:0000839!2.33e-09!70;CL:0002194!7.63e-09!63;CL:0000576!7.63e-09!63;CL:0000040!7.63e-09!63;CL:0000559!7.63e-09!63;CL:0002009!2.16e-08!65;CL:0000037!1.61e-07!172;CL:0000566!1.61e-07!172;CL:0000557!3.37e-07!71;CL:0000766!4.28e-07!76;CL:0000136!7.42e-07!15 | |ontology_enrichment_celltype=CL:0000763!1.26e-13!112;CL:0000049!1.26e-13!112;CL:0000839!2.33e-09!70;CL:0002194!7.63e-09!63;CL:0000576!7.63e-09!63;CL:0000040!7.63e-09!63;CL:0000559!7.63e-09!63;CL:0002009!2.16e-08!65;CL:0000037!1.61e-07!172;CL:0000566!1.61e-07!172;CL:0000557!3.37e-07!71;CL:0000766!4.28e-07!76;CL:0000136!7.42e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.15e-15;2!CL:0000558;1.15e-15;2!CL:0000136;1.10e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.15e-15,2;CL:0000765,1.15e-15,2;CL:0000050,1.15e-15,2;CL:0000038,1.15e-15,2;CL:0000558,1.15e-15,2;CL:0000547,1.15e-15,2;CL:0000549,1.15e-15,2;CL:0000550,1.15e-15,2;CL:0000552,1.15e-15,2;CL:0000136,1.44e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.99e-08;1!UBERON:0010226;5.06e-08;1 | |||
|ontology_enrichment_disease=DOID:8692!3.55e-08!31;DOID:1036!1.29e-07!8 | |ontology_enrichment_disease=DOID:8692!3.55e-08!31;DOID:1036!1.29e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:8692;5.38e-10;31!DOID:8552;2.25e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.88e-10,31;DOID:8552,2.02e-08,1;DOID:1240,3.92e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.19e-11!115;UBERON:0002390!2.55e-10!102;UBERON:0003061!2.55e-10!102;UBERON:0002193!4.18e-10!112 | |ontology_enrichment_uberon=UBERON:0007023!1.19e-11!115;UBERON:0002390!2.55e-10!102;UBERON:0003061!2.55e-10!102;UBERON:0002193!4.18e-10!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;5.06e-10;3!UBERON:0001301;2.25e-08;1!UBERON:0002079;2.99e-08;1!UBERON:0005795;5.06e-08;1!UBERON:0002084;5.06e-08;1!UBERON:0002082;5.06e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,4.73e-10,3;UBERON:0001301,2.33e-08,1;UBERON:0002079,3.33e-08,1;UBERON:0002084,4.11e-08,1;UBERON:0002082,4.11e-08,1;UBERON:0010226,4.11e-08,1 | |||
|phase1_expression=0.181678379270557,2.78330681058278,0,0,0.893922188854576,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0.257575567634187,0.436194716338694,0,0,0,0,0,0,0.512321413058201,0,0,0.645484683583826,0,0,0,0,0.612167784741805,0,0,0.659702600373432,0.199463657621632,0,0,0,0,0,0.521482918420201,0.65156653411535,0,0,0.316462387440884,0.422510572623884,0.425208599930087,0.209658645508376,0.561643155732475,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0.238490624305342,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.761016608938393,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8133722286939,9.41167623689642,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,1.52927441428475,0.569647187174163,0,0.822724546172388,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,12.8066839991811,2.46174797895425,3.51592382018778,0,5.63948020351398,0,4.8347699159725,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07499702804355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,3.98908036560375,0.225595660617181,0.19606253431774,0.503464760927528,6.45162691262229,10.8076873706658,0,0,0,0.216388639742091,0,0.353830258013357,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66926003308263,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0,1.28767814440971,1.56220020209311,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,1.32418394073086,0,0,0,0,0,0.410462603746695,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,1.10043013569766,0,0,0,0,0,0,2.506898940227,4.59518365145192,1.31149052283922,0.314108192500469,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0.485710993059139,0,0,0.237840181555137,3.72722070728568,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,1.22068853494722,0.665756774185513,0.402547587182052,0 | |phase1_expression=0.181678379270557,2.78330681058278,0,0,0.893922188854576,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0.257575567634187,0.436194716338694,0,0,0,0,0,0,0.512321413058201,0,0,0.645484683583826,0,0,0,0,0.612167784741805,0,0,0.659702600373432,0.199463657621632,0,0,0,0,0,0.521482918420201,0.65156653411535,0,0,0.316462387440884,0.422510572623884,0.425208599930087,0.209658645508376,0.561643155732475,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0.238490624305342,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.761016608938393,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8133722286939,9.41167623689642,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,1.52927441428475,0.569647187174163,0,0.822724546172388,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,12.8066839991811,2.46174797895425,3.51592382018778,0,5.63948020351398,0,4.8347699159725,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07499702804355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,3.98908036560375,0.225595660617181,0.19606253431774,0.503464760927528,6.45162691262229,10.8076873706658,0,0,0,0.216388639742091,0,0.353830258013357,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66926003308263,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0,1.28767814440971,1.56220020209311,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,1.32418394073086,0,0,0,0,0,0.410462603746695,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,1.10043013569766,0,0,0,0,0,0,2.506898940227,4.59518365145192,1.31149052283922,0.314108192500469,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0.485710993059139,0,0,0.237840181555137,3.72722070728568,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,1.22068853494722,0.665756774185513,0.402547587182052,0 | ||
|short_description=p20@CD36 | |short_description=p20@CD36 | ||
}} | }} |
Latest revision as of 17:01, 19 September 2015
Short description: | p20@CD36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_CD36_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 57bp_to_AB590184, CU678951, DQ893062, DQ896314_5end |
EntrezGene: | CD36 |
HGNC: | 1663 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.15e-15 | 2 |
erythroblast | 1.15e-15 | 2 |
megakaryocyte-erythroid progenitor cell | 1.15e-15 | 2 |
erythroid progenitor cell | 1.15e-15 | 2 |
reticulocyte | 1.15e-15 | 2 |
proerythroblast | 1.15e-15 | 2 |
basophilic erythroblast | 1.15e-15 | 2 |
polychromatophilic erythroblast | 1.15e-15 | 2 |
orthochromatic erythroblast | 1.15e-15 | 2 |
fat cell | 1.44e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 4.73e-10 | 3 |
epididymis | 2.33e-08 | 1 |
left cardiac atrium | 3.33e-08 | 1 |
heart left ventricle | 4.11e-08 | 1 |
cardiac ventricle | 4.11e-08 | 1 |
future cardiac ventricle | 4.11e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.88e-10 | 31 |
chronic myeloid leukemia | 2.02e-08 | 1 |
leukemia | 3.92e-08 | 39 |