FFCP PHASE1:Hg19::chr12:59314246..59314305,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=121227 | |EntrezGene=121227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30991 | |HGNC=30991 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXM1 | |UniProt=Q6UXM1 | ||
|association_with_transcript=0bp_to_ENST00000320743,NM_153377,uc001sqr.2,uc010ssh.1_5end | |association_with_transcript=0bp_to_ENST00000320743,NM_153377,uc001sqr.2,uc010ssh.1_5end | ||
|cluster_id=chr12:59314246..59314305,- | |||
|description=CAGE_peak_1_at_LRIG3_5end | |description=CAGE_peak_1_at_LRIG3_5end | ||
|id=chr12:59314246..59314305,- | |id=chr12:59314246..59314305,- | ||
|ontology_enrichment_celltype=CL:0000055!1.98e-09!180 | |ontology_enrichment_celltype=CL:0000055!1.98e-09!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.33e-19!659;UBERON:0000475!8.07e-18!365;UBERON:0003102!2.76e-14!95;UBERON:0000481!8.48e-14!347;UBERON:0000467!4.73e-12!625;UBERON:0000480!8.85e-12!626;UBERON:0000922!1.71e-10!612;UBERON:0002050!5.90e-10!605;UBERON:0005423!5.90e-10!605;UBERON:0000923!1.16e-09!604;UBERON:0005291!1.16e-09!604;UBERON:0006598!1.16e-09!604;UBERON:0002532!1.16e-09!604;UBERON:0000477!1.74e-09!286;UBERON:0004119!2.61e-09!169;UBERON:0000925!2.61e-09!169;UBERON:0006595!2.61e-09!169;UBERON:0001007!2.50e-08!155;UBERON:0001555!2.50e-08!155;UBERON:0007026!2.50e-08!155;UBERON:0000161!2.82e-08!35;UBERON:0003104!4.34e-08!238;UBERON:0009142!4.34e-08!238;UBERON:0000119!7.80e-08!312;UBERON:0000165!8.33e-08!28;UBERON:0000930!8.33e-08!28;UBERON:0000483!1.23e-07!309;UBERON:0001444!1.55e-07!48;UBERON:0002100!6.73e-07!216 | |ontology_enrichment_uberon=UBERON:0000468!8.33e-19!659;UBERON:0000475!8.07e-18!365;UBERON:0003102!2.76e-14!95;UBERON:0000481!8.48e-14!347;UBERON:0000467!4.73e-12!625;UBERON:0000480!8.85e-12!626;UBERON:0000922!1.71e-10!612;UBERON:0002050!5.90e-10!605;UBERON:0005423!5.90e-10!605;UBERON:0000923!1.16e-09!604;UBERON:0005291!1.16e-09!604;UBERON:0006598!1.16e-09!604;UBERON:0002532!1.16e-09!604;UBERON:0000477!1.74e-09!286;UBERON:0004119!2.61e-09!169;UBERON:0000925!2.61e-09!169;UBERON:0006595!2.61e-09!169;UBERON:0001007!2.50e-08!155;UBERON:0001555!2.50e-08!155;UBERON:0007026!2.50e-08!155;UBERON:0000161!2.82e-08!35;UBERON:0003104!4.34e-08!238;UBERON:0009142!4.34e-08!238;UBERON:0000119!7.80e-08!312;UBERON:0000165!8.33e-08!28;UBERON:0000930!8.33e-08!28;UBERON:0000483!1.23e-07!309;UBERON:0001444!1.55e-07!48;UBERON:0002100!6.73e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;6.35e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.31e-13,99;UBERON:0004119,4.20e-09,160;UBERON:0000925,4.20e-09,160;UBERON:0006595,4.20e-09,160;UBERON:0000165,1.56e-08,29;UBERON:0000930,1.56e-08,29;UBERON:0000161,1.60e-08,36;UBERON:0001007,6.80e-08,145;UBERON:0001555,6.80e-08,145;UBERON:0007026,6.80e-08,145;UBERON:0001444,1.69e-07,49;UBERON:0000922,2.84e-07,592;UBERON:0000153,3.67e-07,62;UBERON:0007811,3.67e-07,62;UBERON:0000166,3.68e-07,22;UBERON:0005423,5.54e-07,581;UBERON:0000033,9.61e-07,56 | |||
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| ||
|short_description=p1@LRIG3 | |short_description=p1@LRIG3 | ||
}} | }} |
Latest revision as of 17:17, 19 September 2015
Short description: | p1@LRIG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRIG3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000320743, NM_153377, uc001sqr.2, uc010ssh.1_5end |
EntrezGene: | LRIG3 |
HGNC: | 30991 |
UniProt: | Q6UXM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 1.31e-13 | 99 |
endoderm-derived structure | 4.20e-09 | 160 |
endoderm | 4.20e-09 | 160 |
presumptive endoderm | 4.20e-09 | 160 |
mouth | 1.56e-08 | 29 |
stomodeum | 1.56e-08 | 29 |
orifice | 1.60e-08 | 36 |
digestive system | 6.80e-08 | 145 |
digestive tract | 6.80e-08 | 145 |
primitive gut | 6.80e-08 | 145 |
subdivision of head | 1.69e-07 | 49 |
embryo | 2.84e-07 | 592 |
anterior region of body | 3.67e-07 | 62 |
craniocervical region | 3.67e-07 | 62 |
oral opening | 3.68e-07 | 22 |
developing anatomical structure | 5.54e-07 | 581 |
head | 9.61e-07 | 56 |