FFCP PHASE1:Hg19::chr12:59314312..59314338,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:59314312..59314338,-
|short_description=p4@LRIG3
|description=CAGE_peak_4_at_LRIG3_5end
|association_with_transcript=-9bp_to_ENST00000320743_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121227 | |EntrezGene=121227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30991 | |HGNC=30991 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXM1 | |UniProt=Q6UXM1 | ||
|association_with_transcript=-9bp_to_ENST00000320743_5end | |||
|cluster_id=chr12:59314312..59314338,- | |||
|description=CAGE_peak_4_at_LRIG3_5end | |||
|id=chr12:59314312..59314338,- | |||
|ontology_enrichment_celltype=CL:0000066!1.88e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0002251;9.64e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,7.55e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.45e-17!169;UBERON:0000925!1.45e-17!169;UBERON:0006595!1.45e-17!169;UBERON:0001007!1.39e-15!155;UBERON:0001555!1.39e-15!155;UBERON:0007026!1.39e-15!155;UBERON:0000468!6.05e-14!659;UBERON:0000475!9.92e-13!365;UBERON:0003102!7.73e-12!95;UBERON:0004921!4.73e-11!129;UBERON:0004185!4.73e-11!129;UBERON:0000467!5.29e-10!625;UBERON:0000481!7.67e-10!347;UBERON:0000480!8.61e-10!626;UBERON:0000161!1.09e-09!35;UBERON:0000077!1.73e-09!130;UBERON:0000922!2.45e-09!612;UBERON:0000165!2.72e-08!28;UBERON:0000930!2.72e-08!28;UBERON:0002050!4.19e-08!605;UBERON:0005423!4.19e-08!605;UBERON:0000477!5.77e-08!286;UBERON:0000466!8.05e-08!126;UBERON:0000923!8.41e-08!604;UBERON:0005291!8.41e-08!604;UBERON:0006598!8.41e-08!604;UBERON:0002532!8.41e-08!604;UBERON:0000464!1.08e-07!104;UBERON:0003104!1.21e-07!238;UBERON:0009142!1.21e-07!238;UBERON:0001444!3.00e-07!48;UBERON:0001008!3.06e-07!45;UBERON:0000166!3.45e-07!21;UBERON:0000064!4.69e-07!219;UBERON:0006554!7.63e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.37e-08;49!UBERON:0000165;7.54e-08;28!UBERON:0001555;1.38e-07;54!UBERON:0004921;3.82e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.87e-13,160;UBERON:0000925,3.87e-13,160;UBERON:0006595,3.87e-13,160;UBERON:0001007,1.48e-11,145;UBERON:0001555,1.48e-11,145;UBERON:0007026,1.48e-11,145;UBERON:0003102,3.06e-11,99;UBERON:0000161,5.93e-10,36;UBERON:0000165,5.01e-09,29;UBERON:0000930,5.01e-09,29;UBERON:0004921,3.54e-08,118;UBERON:0000166,4.63e-08,22;UBERON:0000033,5.27e-07,56;UBERON:0001008,8.72e-07,48;UBERON:0000153,9.73e-07,62;UBERON:0007811,9.73e-07,62 | |||
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| ||
|short_description=p4@LRIG3 | |||
}} | }} |
Latest revision as of 17:18, 19 September 2015
Short description: | p4@LRIG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRIG3_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000320743_5end |
EntrezGene: | LRIG3 |
HGNC: | 30991 |
UniProt: | Q6UXM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 7.55e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.87e-13 | 160 |
endoderm | 3.87e-13 | 160 |
presumptive endoderm | 3.87e-13 | 160 |
digestive system | 1.48e-11 | 145 |
digestive tract | 1.48e-11 | 145 |
primitive gut | 1.48e-11 | 145 |
surface structure | 3.06e-11 | 99 |
orifice | 5.93e-10 | 36 |
mouth | 5.01e-09 | 29 |
stomodeum | 5.01e-09 | 29 |
subdivision of digestive tract | 3.54e-08 | 118 |
oral opening | 4.63e-08 | 22 |
head | 5.27e-07 | 56 |
renal system | 8.72e-07 | 48 |
anterior region of body | 9.73e-07 | 62 |
craniocervical region | 9.73e-07 | 62 |