FFCP PHASE1:Hg19::chr12:59314312..59314338,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:59314312..59314338,- to FFCP PHASE1:Hg19::chr12:59314312..59314338,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121227 | |EntrezGene=121227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30991 | |HGNC=30991 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXM1 | |UniProt=Q6UXM1 | ||
|association_with_transcript=-9bp_to_ENST00000320743_5end | |||
|cluster_id=chr12:59314312..59314338,- | |||
|description=CAGE_peak_4_at_LRIG3_5end | |||
|id=chr12:59314312..59314338,- | |||
|ontology_enrichment_celltype=CL:0000066!1.88e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0002251;9.64e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,7.55e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.45e-17!169;UBERON:0000925!1.45e-17!169;UBERON:0006595!1.45e-17!169;UBERON:0001007!1.39e-15!155;UBERON:0001555!1.39e-15!155;UBERON:0007026!1.39e-15!155;UBERON:0000468!6.05e-14!659;UBERON:0000475!9.92e-13!365;UBERON:0003102!7.73e-12!95;UBERON:0004921!4.73e-11!129;UBERON:0004185!4.73e-11!129;UBERON:0000467!5.29e-10!625;UBERON:0000481!7.67e-10!347;UBERON:0000480!8.61e-10!626;UBERON:0000161!1.09e-09!35;UBERON:0000077!1.73e-09!130;UBERON:0000922!2.45e-09!612;UBERON:0000165!2.72e-08!28;UBERON:0000930!2.72e-08!28;UBERON:0002050!4.19e-08!605;UBERON:0005423!4.19e-08!605;UBERON:0000477!5.77e-08!286;UBERON:0000466!8.05e-08!126;UBERON:0000923!8.41e-08!604;UBERON:0005291!8.41e-08!604;UBERON:0006598!8.41e-08!604;UBERON:0002532!8.41e-08!604;UBERON:0000464!1.08e-07!104;UBERON:0003104!1.21e-07!238;UBERON:0009142!1.21e-07!238;UBERON:0001444!3.00e-07!48;UBERON:0001008!3.06e-07!45;UBERON:0000166!3.45e-07!21;UBERON:0000064!4.69e-07!219;UBERON:0006554!7.63e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.37e-08;49!UBERON:0000165;7.54e-08;28!UBERON:0001555;1.38e-07;54!UBERON:0004921;3.82e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.87e-13,160;UBERON:0000925,3.87e-13,160;UBERON:0006595,3.87e-13,160;UBERON:0001007,1.48e-11,145;UBERON:0001555,1.48e-11,145;UBERON:0007026,1.48e-11,145;UBERON:0003102,3.06e-11,99;UBERON:0000161,5.93e-10,36;UBERON:0000165,5.01e-09,29;UBERON:0000930,5.01e-09,29;UBERON:0004921,3.54e-08,118;UBERON:0000166,4.63e-08,22;UBERON:0000033,5.27e-07,56;UBERON:0001008,8.72e-07,48;UBERON:0000153,9.73e-07,62;UBERON:0007811,9.73e-07,62 | |||
|phase1_expression=0.726713517082227,1.07050261945492,0.140954404095971,7.00513088471913,1.78784437770915,0,5.06599756336621,0,1.30592814099919,0.491467873003018,0.697801167972428,0.436882744260345,0.263766978228454,1.36142988256051,0.994192127183747,0,0.602694528023977,0.730310090387373,0.487932798790507,0.861847406537515,1.22400414746552,0,0.572471974262113,0.958120975510189,1.00434111675842,0.0764134057479513,0.492603536699674,0.0787107813136792,0,0,0.154816123316076,1.83884244895785,2.71085326900425,0.739508020333575,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,2.1686349143074,1.00267582127178,1.01392563272577,0.795285947051099,1.45990461090791,0.850813354476611,1.10864698731282,1.84453049955565,0.916853528483988,1.45718115317017,1.48313777113772,0,0,0,0,0,0,1.39133685156694,0,1.04142150482278,1.13061588384802,1.25849830862972,1.37559020970034,1.46296476575767,2.06733407335463,1.06729878806013,2.34304428935269,0.805658634218294,0.760272105718513,2.19655851793353,1.83831540172934,0.81014194788176,2.76829157680647,4.93964619777574,3.0405099730497,1.53316637465883,0,0.549605231791222,0,0,2.18047026071267,0,0.12663051166458,0.397227542439656,3.15520282823695,0.354668382198357,1.12135520028461,0,0.98667019366864,0.933633106199299,2.02066008104532,0.817309515567294,1.05950199351452,1.15235184896,0.234321431833797,1.87296046098192,0,0.448346041655403,0.352303495931295,0.809364721840658,0.98315564691574,0.204154171254893,0.859840221182376,0.619954687054593,1.18800285728205,1.7308685049499,0,0,1.68336113954066,1.7516592782075,0.277064115484183,1.31693286264251,0.612975591598039,1.50238058906597,0.453728732640084,1.79389635688862,1.70845911054854,2.11931901159562,1.80054657650641,1.33968288009971,3.09168648054755,1.30281799432113,1.18143432568886,0.876933046450788,4.29137416214995,2.57739716198438,1.93975268182574,2.13005755509969,0.604512589365842,0.847802961552438,1.54608682530637,1.63647672354501,1.14721838155602,0.243947412259191,0.662648841607426,2.5562667431294,2.28054321033815,0.756962552626885,1.09493207722749,0,1.28648187638577,0,0.928735856063958,0,0.354920400119532,1.34867752062481,0.241011029883482,0.441175890929576,0.435758888184812,0.949082476444386,0.269662616320329,0.196221465125346,0,2.95262181849859,1.40241773803446,0.4115740113314,0,0,0,1.77236972004421,0.882926198829301,2.58275720940538,0.686271241194102,1.09750285408626,0,1.50793458617446,5.55530670951178,0.977424915930974,0,0,0.34779121492523,1.87853910777315,1.44366447761074,0.462985512576611,0.570762456703795,0.790204397959275,0,0,0,0,2.81201501960331,1.00789276919316,2.1266264586358,2.14940454486836,2.3250715081117,2.30029607499127,0,0,0.207328115540772,0,0.12624243342638,0.698476837213859,1.90994212779139,0,0,0.514137463516618,0,0,0.784917590417525,0,0.66004457238855,1.42198887333556,0,0,1.32969058292435,3.12022310734098,1.28603687131071,1.41849132023278,0.266422179016099,0.285955987316295,0,0,0.977208552881205,0,0.791951872933429,0,0,0.099972991182057,0,0,0,1.67737398844108,1.14861935834114,0,0.289562613335158,0.410952645100767,0.716243852959582,0,0,0,0,1.77866236955724,0,0,0.335032530668698,0,0,0,0,2.94459580125936,0.500170521059677,1.08506009479894,1.45579603071565,0,1.41932173530541,0.702848489956279,2.40756879782175,0,1.03473071292505,1.32845119707087,0.553107505625109,0.955719759148911,1.37060810223918,2.05886054286514,0,0,0,0.303127571446259,0,0.907170879989041,0.248107807818777,0.920771839728375,0.561320188866147,0.256278298511402,1.53512174720011,0.804269605718038,0,0.616838775210622,0.355123450626254,0.410635780069046,0,0.232420756919918,2.53804844142407,1.40354529212299,1.01289087829486,0.574072240823034,1.45672934405374,1.96686622439136,1.80479845162965,2.31046011313244,3.13739907670742,2.92278449306521,5.69978796021529,1.13733384070897,0.340187410553031,2.15915916102139,0,1.35473218771926,2.00675909541941,0.509752546090077,0.831076008928724,2.23874754722178,0.219259876645935,0,0.256450125116389,0.656029291399411,0,1.54561517471583,1.00726411300178,1.23764249880882,1.72279661398852,1.95018073810956,0,0.290012154876366,0.924291702687866,0.614014698904518,0.413509717453592,1.18162269355101,1.59518363305651,1.53407929348982,0.623224249527161,1.81813406897076,0.576570202095319,3.82838137483752,3.33820676823315,0,0,0.6970372701606,0,0,0,0.37064843820784,1.00187420719394,0.744316738719335,0.632758849437452,0.953150969619124,0,0.855877976067841,0,1.56989728039846,0.719489830333259,1.64722217841633,1.53156123049392,0,0,1.26377536871694,0.48763373908959,0.243713489631284,0,1.77449884830381,0.707027159768564,1.13008116620243,0.551365343546124,0,0,1.15755106853338,0.655894752046633,0,0,0,0.430234056612155,1.08073945114433,0,1.41904425628239,1.68886108238131,1.31717957183961,0.379473173765715,1.04980416073495,0.769776901804097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| ||
|short_description=p4@LRIG3 | |||
}} | }} |
Latest revision as of 17:18, 19 September 2015
Short description: | p4@LRIG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRIG3_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000320743_5end |
EntrezGene: | LRIG3 |
HGNC: | 30991 |
UniProt: | Q6UXM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 7.55e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.87e-13 | 160 |
endoderm | 3.87e-13 | 160 |
presumptive endoderm | 3.87e-13 | 160 |
digestive system | 1.48e-11 | 145 |
digestive tract | 1.48e-11 | 145 |
primitive gut | 1.48e-11 | 145 |
surface structure | 3.06e-11 | 99 |
orifice | 5.93e-10 | 36 |
mouth | 5.01e-09 | 29 |
stomodeum | 5.01e-09 | 29 |
subdivision of digestive tract | 3.54e-08 | 118 |
oral opening | 4.63e-08 | 22 |
head | 5.27e-07 | 56 |
renal system | 8.72e-07 | 48 |
anterior region of body | 9.73e-07 | 62 |
craniocervical region | 9.73e-07 | 62 |