FFCP PHASE1:Hg19::chr5:110848189..110848240,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=134429 | |EntrezGene=134429 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18058 | |HGNC=18058 | ||
|TSSclassifier=strong | |||
|UniProt=Q96DR4,D6REN7,D6RDM5 | |UniProt=Q96DR4,D6REN7,D6RDM5 | ||
|association_with_transcript=0bp_to_ENST00000296632,ENST00000455172,ENST00000502931,ENST00000508215,ENST00000509887,ENST00000511137,ENST00000511436,ENST00000511569,ENST00000512160,uc003kpi.1_5end | |association_with_transcript=0bp_to_ENST00000296632,ENST00000455172,ENST00000502931,ENST00000508215,ENST00000509887,ENST00000511137,ENST00000511436,ENST00000511569,ENST00000512160,uc003kpi.1_5end | ||
|cluster_id=chr5:110848189..110848240,- | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_1_at_STARD4_5end | |description=CAGE_peak_1_at_STARD4_5end | ||
|id=chr5:110848189..110848240,- | |id=chr5:110848189..110848240,- | ||
|ontology_enrichment_celltype=CL:0002371!2.77e-16!591;CL:0000144!3.75e-16!625;CL:0000012!6.64e-16!682;CL:0000548!7.36e-16!679;CL:0000004!7.36e-16!679;CL:0000255!7.36e-16!679;CL:0000003!9.96e-14!722;CL:0000063!7.57e-12!578;CL:0000723!1.40e-08!436;CL:0000034!5.51e-08!444;CL:0000048!6.78e-08!430;CL:0000134!8.79e-07!358 | |ontology_enrichment_celltype=CL:0002371!2.77e-16!591;CL:0000144!3.75e-16!625;CL:0000012!6.64e-16!682;CL:0000548!7.36e-16!679;CL:0000004!7.36e-16!679;CL:0000255!7.36e-16!679;CL:0000003!9.96e-14!722;CL:0000063!7.57e-12!578;CL:0000723!1.40e-08!436;CL:0000034!5.51e-08!444;CL:0000048!6.78e-08!430;CL:0000134!8.79e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.02e-07;39!CL:0000234;4.02e-07;39!CL:0000860;9.16e-07;33!CL:0002057;9.16e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,7.27e-09,433;CL:0000034,2.94e-08,441;CL:0000048,3.62e-08,427;CL:0000473,5.07e-07,48;CL:0000234,5.07e-07,48;CL:0000134,6.41e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@STARD4 | |short_description=p1@STARD4 | ||
}} | }} |
Latest revision as of 17:21, 19 September 2015
Short description: | p1@STARD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STARD4_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000296632, ENST00000455172, ENST00000502931, ENST00000508215, ENST00000509887, ENST00000511137, ENST00000511436, ENST00000511569, ENST00000512160, uc003kpi.1_5end |
EntrezGene: | STARD4 |
HGNC: | 18058 |
UniProt: | Q96DR4D6REN7D6RDM5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 7.27e-09 | 433 |
stem cell | 2.94e-08 | 441 |
multi fate stem cell | 3.62e-08 | 427 |
defensive cell | 5.07e-07 | 48 |
phagocyte | 5.07e-07 | 48 |
mesenchymal cell | 6.41e-07 | 354 |