FFCP PHASE1:Hg19::chr12:6233727..6233738,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:6233727..6233738,- to FFCP PHASE1:Hg19::chr12:6233727..6233738,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7450 | |EntrezGene=7450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12726 | |HGNC=12726 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=92bp_to_ENST00000540192_5end | |||
|cluster_id=chr12:6233727..6233738,- | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_5_at_VWF_5end | |||
|id=chr12:6233727..6233738,- | |||
|ontology_enrichment_celltype=CL:0002139!1.71e-31!24;CL:0000115!2.99e-29!35;CL:0000071!1.48e-23!18;CL:0002546!1.48e-23!18;CL:0002078!6.70e-21!44;CL:0000213!1.11e-13!57;CL:0000215!1.11e-13!57;CL:1000413!2.18e-12!9;CL:0005020!1.78e-09!6;CL:0002138!1.78e-09!6;CL:0005022!1.78e-09!6;CL:0002543!6.36e-09!6;CL:0002544!9.67e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.84e-39;24!CL:0000115;4.80e-32;36!CL:0000071;7.49e-29;18!CL:0002078;3.33e-18;45!CL:1000413;5.26e-15;9!CL:0000213;1.37e-12;58!CL:0000215;1.37e-12;58!CL:0002138;2.16e-11;6!CL:0002543;1.15e-10;6!CL:0002544;1.71e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.02e-38,24;CL:0000115,5.84e-38,36;CL:0000071,7.45e-29,18;CL:0002546,7.45e-29,18;CL:0002078,3.76e-28,45;CL:0000213,1.81e-19,58;CL:0000215,1.81e-19,58;CL:1000413,5.53e-15,9;CL:0005020,2.25e-11,6;CL:0002138,2.25e-11,6;CL:0005022,2.25e-11,6;CL:0002543,1.09e-10,6;CL:0002544,1.83e-10,6 | |||
|ontology_enrichment_development_v019=CL:0002546;7.49e-29;18!CL:0005022;2.16e-11;6!UBERON:0004872;1.46e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.32e-69!115;UBERON:0004111!7.13e-26!241;UBERON:0001049!2.50e-25!57;UBERON:0005068!2.50e-25!57;UBERON:0006241!2.50e-25!57;UBERON:0007135!2.50e-25!57;UBERON:0001986!1.48e-23!18;UBERON:0004638!1.48e-23!18;UBERON:0004852!1.48e-23!18;UBERON:0000477!2.10e-22!286;UBERON:0000025!6.66e-22!194;UBERON:0003080!8.82e-22!42;UBERON:0002780!8.02e-21!41;UBERON:0001890!8.02e-21!41;UBERON:0006240!8.02e-21!41;UBERON:0002616!3.32e-20!59;UBERON:0000955!3.66e-19!69;UBERON:0006238!3.66e-19!69;UBERON:0001017!7.50e-19!82;UBERON:0005743!2.15e-18!86;UBERON:0003075!2.23e-18!86;UBERON:0007284!2.23e-18!86;UBERON:0000487!5.26e-18!22;UBERON:0002346!6.69e-17!90;UBERON:0001893!1.30e-16!34;UBERON:0002020!1.54e-16!34;UBERON:0003528!1.54e-16!34;UBERON:0000073!5.19e-16!94;UBERON:0001016!5.19e-16!94;UBERON:0002791!6.21e-16!33;UBERON:0001869!4.68e-15!32;UBERON:0006914!4.87e-15!25;UBERON:0003056!6.89e-13!61;UBERON:0002619!7.60e-13!22;UBERON:0003915!2.18e-12!9;UBERON:0004700!2.18e-12!9;UBERON:0001917!2.18e-12!9;UBERON:0000483!7.73e-12!309;UBERON:0000153!1.35e-11!129;UBERON:0007811!1.35e-11!129;UBERON:0001950!1.70e-11!20;UBERON:0000119!1.78e-11!312;UBERON:0000055!2.63e-11!69;UBERON:0000956!1.01e-10!25;UBERON:0000203!1.01e-10!25;UBERON:0000033!2.99e-10!123;UBERON:0002049!1.25e-08!79;UBERON:0007798!1.25e-08!79;UBERON:0000468!1.27e-08!659;UBERON:0001009!1.64e-08!113;UBERON:0002465!1.98e-08!10;UBERON:0004121!2.80e-08!169;UBERON:0004872!2.82e-08!84;UBERON:0002298!6.32e-08!8;UBERON:0001981!6.57e-08!60;UBERON:0007500!6.57e-08!60;UBERON:0004537!6.57e-08!60;UBERON:0006965!6.57e-08!60;UBERON:0000924!9.29e-08!173;UBERON:0006601!9.29e-08!173;UBERON:0000467!9.80e-08!625;UBERON:0000480!1.16e-07!626;UBERON:0002308!1.20e-07!9;UBERON:0000125!1.20e-07!9;UBERON:0001638!1.96e-07!9;UBERON:0003920!1.96e-07!9;UBERON:0004582!1.96e-07!9;UBERON:0004535!4.29e-07!110;UBERON:0001473!9.80e-07!8;UBERON:0004536!9.80e-07!8;UBERON:0006558!9.80e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.49e-29;18!UBERON:0001986;7.49e-29;18!UBERON:0004852;7.49e-29;18!UBERON:0000487;1.90e-22;22!UBERON:0006914;5.23e-19;25!UBERON:0003915;5.26e-15;9!UBERON:0004700;5.26e-15;9!UBERON:0001917;5.26e-15;9!UBERON:0007023;1.57e-13;114!UBERON:0000490;5.01e-12;33!UBERON:0002465;3.38e-10;10!UBERON:0001638;4.64e-09;9!UBERON:0003920;4.64e-09;9!UBERON:0004582;4.64e-09;9!UBERON:0002619;4.83e-09;22!UBERON:0001893;5.53e-09;34!UBERON:0001950;7.87e-09;20!UBERON:0000055;1.09e-08;65!UBERON:0003528;1.55e-08;34!UBERON:0002020;1.55e-08;34!UBERON:0002780;2.14e-08;41!UBERON:0001890;2.14e-08;41!UBERON:0001473;3.16e-08;8!UBERON:0004536;3.16e-08;8!UBERON:0006558;3.16e-08;8!UBERON:0001869;4.90e-08;32!UBERON:0000073;4.97e-08;53!UBERON:0002616;4.97e-08;53!UBERON:0002791;4.99e-08;32!UBERON:0000956;1.32e-07;25!UBERON:0000203;1.32e-07;25!UBERON:0002298;2.24e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.37e-53,114;UBERON:0004638,7.45e-29,18;UBERON:0001986,7.45e-29,18;UBERON:0004852,7.45e-29,18;UBERON:0004111,7.42e-23,240;UBERON:0000487,1.90e-22,22;UBERON:0006914,5.21e-19,25;UBERON:0000025,3.60e-17,192;UBERON:0000055,3.42e-16,68;UBERON:0003915,5.53e-15,9;UBERON:0004700,5.53e-15,9;UBERON:0001917,5.53e-15,9;UBERON:0002049,7.61e-13,78;UBERON:0007798,7.61e-13,78;UBERON:0001049,1.17e-12,56;UBERON:0005068,1.17e-12,56;UBERON:0006241,1.17e-12,56;UBERON:0007135,1.17e-12,56;UBERON:0000073,1.10e-11,53;UBERON:0002616,1.10e-11,53;UBERON:0007500,1.71e-11,59;UBERON:0001981,1.71e-11,59;UBERON:0004537,1.71e-11,59;UBERON:0006965,1.71e-11,59;UBERON:0001009,2.67e-11,112;UBERON:0004872,6.38e-11,83;UBERON:0001893,1.71e-10,34;UBERON:0003528,1.98e-10,34;UBERON:0002020,1.98e-10,34;UBERON:0002465,2.58e-10,10;UBERON:0002780,8.56e-10,41;UBERON:0001890,8.56e-10,41;UBERON:0003080,8.56e-10,41;UBERON:0006240,8.56e-10,41;UBERON:0003075,1.70e-09,82;UBERON:0007284,1.70e-09,82;UBERON:0004535,1.93e-09,109;UBERON:0001638,4.45e-09,9;UBERON:0003920,4.45e-09,9;UBERON:0004582,4.45e-09,9;UBERON:0002791,5.26e-09,32;UBERON:0000955,5.47e-09,68;UBERON:0006238,5.47e-09,68;UBERON:0001869,5.90e-09,32;UBERON:0002619,7.28e-09,22;UBERON:0000483,7.45e-09,306;UBERON:0002346,1.12e-08,86;UBERON:0000119,1.36e-08,309;UBERON:0001950,1.37e-08,20;UBERON:0001017,1.56e-08,81;UBERON:0001473,3.26e-08,8;UBERON:0004536,3.26e-08,8;UBERON:0006558,3.26e-08,8;UBERON:0010314,3.60e-08,132;UBERON:0000956,1.88e-07,25;UBERON:0000203,1.88e-07,25;UBERON:0003914,2.57e-07,117;UBERON:0002298,3.24e-07,6;UBERON:0003887,3.62e-07,12;UBERON:0001016,5.91e-07,89 | |||
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| ||
|short_description=p5@VWF | |||
}} | }} |
Latest revision as of 17:54, 19 September 2015
Short description: | p5@VWF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_VWF_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | 92bp_to_ENST00000540192_5end |
EntrezGene: | VWF |
HGNC: | 12726 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.02e-38 | 24 |
endothelial cell | 5.84e-38 | 36 |
blood vessel endothelial cell | 7.45e-29 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.45e-29 | 18 |
meso-epithelial cell | 3.76e-28 | 45 |
lining cell | 1.81e-19 | 58 |
barrier cell | 1.81e-19 | 58 |
endothelial cell of artery | 5.53e-15 | 9 |
lymphangioblast | 2.25e-11 | 6 |
endothelial cell of lymphatic vessel | 2.25e-11 | 6 |
vascular lymphangioblast | 2.25e-11 | 6 |
vein endothelial cell | 1.09e-10 | 6 |
aortic endothelial cell | 1.83e-10 | 6 |