FFCP PHASE1:Hg19::chr7:82073082..82073100,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=781 | |EntrezGene=781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1399 | |HGNC=1399 | ||
|TSSclassifier=strong | |||
|UniProt=P54289 | |UniProt=P54289 | ||
|association_with_transcript=13bp_to_ENST00000356860_5end | |association_with_transcript=13bp_to_ENST00000356860_5end | ||
|cluster_id=chr7:82073082..82073100,- | |||
|description=CAGE_peak_2_at_CACNA2D1_5end | |description=CAGE_peak_2_at_CACNA2D1_5end | ||
|id=chr7:82073082..82073100,- | |id=chr7:82073082..82073100,- | ||
|ontology_enrichment_celltype=CL:0000055!4.45e-18!180;CL:0000393!3.72e-13!60;CL:0000211!3.72e-13!60;CL:0000680!3.61e-12!57;CL:0000056!3.61e-12!57;CL:0000355!3.61e-12!57;CL:0000187!1.40e-11!54;CL:0000183!1.88e-10!59;CL:0000192!4.70e-10!42;CL:0000514!4.70e-10!42;CL:0000057!6.10e-09!75;CL:0002494!7.79e-09!16;CL:0000359!1.56e-08!32;CL:0000222!1.69e-08!119 | |ontology_enrichment_celltype=CL:0000055!4.45e-18!180;CL:0000393!3.72e-13!60;CL:0000211!3.72e-13!60;CL:0000680!3.61e-12!57;CL:0000056!3.61e-12!57;CL:0000355!3.61e-12!57;CL:0000187!1.40e-11!54;CL:0000183!1.88e-10!59;CL:0000192!4.70e-10!42;CL:0000514!4.70e-10!42;CL:0000057!6.10e-09!75;CL:0002494!7.79e-09!16;CL:0000359!1.56e-08!32;CL:0000222!1.69e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0002494;2.48e-09;16!CL:0000359;4.20e-08;32!CL:0000192;1.53e-07;43!CL:0000393;1.79e-07;61!CL:0000211;1.79e-07;61 | |ontology_enrichment_celltype_v019=CL:0002494;2.48e-09;16!CL:0000359;4.20e-08;32!CL:0000192;1.53e-07;43!CL:0000393;1.79e-07;61!CL:0000211;1.79e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,6.93e-13,61;CL:0000211,6.93e-13,61;CL:0000680,7.38e-12,58;CL:0000056,7.38e-12,58;CL:0000355,7.38e-12,58;CL:0000187,3.11e-11,55;CL:0000192,1.44e-09,43;CL:0000514,1.44e-09,43;CL:0002494,2.59e-09,16;CL:0000359,2.09e-08,32;CL:0000057,5.69e-08,76;CL:0000222,2.47e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.53e-07;43!CL:0000355;9.11e-07;58 | |ontology_enrichment_development_v019=CL:0000514;1.53e-07;43!CL:0000355;9.11e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!1.36e-19!309;UBERON:0000119!2.08e-19!312;UBERON:0000073!1.71e-17!94;UBERON:0001016!1.71e-17!94;UBERON:0000025!3.44e-17!194;UBERON:0001017!8.25e-17!82;UBERON:0002346!2.13e-16!90;UBERON:0000477!3.05e-16!286;UBERON:0000475!7.08e-16!365;UBERON:0004111!1.32e-15!241;UBERON:0005743!2.49e-15!86;UBERON:0003075!2.99e-15!86;UBERON:0007284!2.99e-15!86;UBERON:0002616!7.83e-15!59;UBERON:0002385!1.10e-14!63;UBERON:0001015!1.10e-14!63;UBERON:0000383!1.10e-14!63;UBERON:0000924!2.41e-14!173;UBERON:0006601!2.41e-14!173;UBERON:0001134!3.29e-14!61;UBERON:0002036!3.29e-14!61;UBERON:0003082!3.29e-14!61;UBERON:0000481!3.69e-14!347;UBERON:0003080!4.50e-14!42;UBERON:0001049!6.19e-14!57;UBERON:0005068!6.19e-14!57;UBERON:0006241!6.19e-14!57;UBERON:0007135!6.19e-14!57;UBERON:0004290!7.77e-14!70;UBERON:0002780!9.25e-14!41;UBERON:0001890!9.25e-14!41;UBERON:0006240!9.25e-14!41;UBERON:0000914!9.41e-14!83;UBERON:0002329!9.41e-14!83;UBERON:0003077!9.41e-14!83;UBERON:0003059!9.41e-14!83;UBERON:0007282!9.41e-14!83;UBERON:0009618!9.41e-14!83;UBERON:0007285!9.41e-14!83;UBERON:0000955!1.12e-13!69;UBERON:0006238!1.12e-13!69;UBERON:0003056!1.20e-13!61;UBERON:0004872!1.70e-13!84;UBERON:0004121!2.35e-13!169;UBERON:0000468!2.62e-13!659;UBERON:0002020!3.48e-12!34;UBERON:0003528!3.48e-12!34;UBERON:0001893!4.04e-12!34;UBERON:0000033!4.50e-12!123;UBERON:0000153!7.70e-12!129;UBERON:0007811!7.70e-12!129;UBERON:0002791!1.03e-11!33;UBERON:0001869!1.38e-11!32;UBERON:0002049!1.52e-11!79;UBERON:0007798!1.52e-11!79;UBERON:0001637!1.77e-11!42;UBERON:0003509!1.77e-11!42;UBERON:0004572!1.77e-11!42;UBERON:0001009!2.22e-11!113;UBERON:0004535!4.07e-11!110;UBERON:0000922!4.53e-11!612;UBERON:0000486!3.25e-10!82;UBERON:0000467!3.29e-10!625;UBERON:0000948!3.30e-10!24;UBERON:0005498!3.30e-10!24;UBERON:0004140!3.30e-10!24;UBERON:0009881!3.30e-10!24;UBERON:0004141!3.30e-10!24;UBERON:0003084!3.30e-10!24;UBERON:0007005!3.30e-10!24;UBERON:0004139!3.30e-10!24;UBERON:0004291!3.30e-10!24;UBERON:0007100!3.81e-10!27;UBERON:0000480!5.38e-10!626;UBERON:0001981!6.66e-10!60;UBERON:0007500!6.66e-10!60;UBERON:0004537!6.66e-10!60;UBERON:0006965!6.66e-10!60;UBERON:0007023!7.93e-10!115;UBERON:0002050!8.59e-10!605;UBERON:0005423!8.59e-10!605;UBERON:0000956!8.94e-10!25;UBERON:0000203!8.94e-10!25;UBERON:0000923!9.36e-10!604;UBERON:0005291!9.36e-10!604;UBERON:0006598!9.36e-10!604;UBERON:0002532!9.36e-10!604;UBERON:0002619!2.70e-09!22;UBERON:0004573!3.80e-09!33;UBERON:0004571!3.80e-09!33;UBERON:0000055!9.34e-09!69;UBERON:0001950!1.46e-08!20;UBERON:0000490!1.94e-07!138;UBERON:0003914!3.51e-07!118;UBERON:0005256!6.88e-07!143 | |ontology_enrichment_uberon=UBERON:0000483!1.36e-19!309;UBERON:0000119!2.08e-19!312;UBERON:0000073!1.71e-17!94;UBERON:0001016!1.71e-17!94;UBERON:0000025!3.44e-17!194;UBERON:0001017!8.25e-17!82;UBERON:0002346!2.13e-16!90;UBERON:0000477!3.05e-16!286;UBERON:0000475!7.08e-16!365;UBERON:0004111!1.32e-15!241;UBERON:0005743!2.49e-15!86;UBERON:0003075!2.99e-15!86;UBERON:0007284!2.99e-15!86;UBERON:0002616!7.83e-15!59;UBERON:0002385!1.10e-14!63;UBERON:0001015!1.10e-14!63;UBERON:0000383!1.10e-14!63;UBERON:0000924!2.41e-14!173;UBERON:0006601!2.41e-14!173;UBERON:0001134!3.29e-14!61;UBERON:0002036!3.29e-14!61;UBERON:0003082!3.29e-14!61;UBERON:0000481!3.69e-14!347;UBERON:0003080!4.50e-14!42;UBERON:0001049!6.19e-14!57;UBERON:0005068!6.19e-14!57;UBERON:0006241!6.19e-14!57;UBERON:0007135!6.19e-14!57;UBERON:0004290!7.77e-14!70;UBERON:0002780!9.25e-14!41;UBERON:0001890!9.25e-14!41;UBERON:0006240!9.25e-14!41;UBERON:0000914!9.41e-14!83;UBERON:0002329!9.41e-14!83;UBERON:0003077!9.41e-14!83;UBERON:0003059!9.41e-14!83;UBERON:0007282!9.41e-14!83;UBERON:0009618!9.41e-14!83;UBERON:0007285!9.41e-14!83;UBERON:0000955!1.12e-13!69;UBERON:0006238!1.12e-13!69;UBERON:0003056!1.20e-13!61;UBERON:0004872!1.70e-13!84;UBERON:0004121!2.35e-13!169;UBERON:0000468!2.62e-13!659;UBERON:0002020!3.48e-12!34;UBERON:0003528!3.48e-12!34;UBERON:0001893!4.04e-12!34;UBERON:0000033!4.50e-12!123;UBERON:0000153!7.70e-12!129;UBERON:0007811!7.70e-12!129;UBERON:0002791!1.03e-11!33;UBERON:0001869!1.38e-11!32;UBERON:0002049!1.52e-11!79;UBERON:0007798!1.52e-11!79;UBERON:0001637!1.77e-11!42;UBERON:0003509!1.77e-11!42;UBERON:0004572!1.77e-11!42;UBERON:0001009!2.22e-11!113;UBERON:0004535!4.07e-11!110;UBERON:0000922!4.53e-11!612;UBERON:0000486!3.25e-10!82;UBERON:0000467!3.29e-10!625;UBERON:0000948!3.30e-10!24;UBERON:0005498!3.30e-10!24;UBERON:0004140!3.30e-10!24;UBERON:0009881!3.30e-10!24;UBERON:0004141!3.30e-10!24;UBERON:0003084!3.30e-10!24;UBERON:0007005!3.30e-10!24;UBERON:0004139!3.30e-10!24;UBERON:0004291!3.30e-10!24;UBERON:0007100!3.81e-10!27;UBERON:0000480!5.38e-10!626;UBERON:0001981!6.66e-10!60;UBERON:0007500!6.66e-10!60;UBERON:0004537!6.66e-10!60;UBERON:0006965!6.66e-10!60;UBERON:0007023!7.93e-10!115;UBERON:0002050!8.59e-10!605;UBERON:0005423!8.59e-10!605;UBERON:0000956!8.94e-10!25;UBERON:0000203!8.94e-10!25;UBERON:0000923!9.36e-10!604;UBERON:0005291!9.36e-10!604;UBERON:0006598!9.36e-10!604;UBERON:0002532!9.36e-10!604;UBERON:0002619!2.70e-09!22;UBERON:0004573!3.80e-09!33;UBERON:0004571!3.80e-09!33;UBERON:0000055!9.34e-09!69;UBERON:0001950!1.46e-08!20;UBERON:0000490!1.94e-07!138;UBERON:0003914!3.51e-07!118;UBERON:0005256!6.88e-07!143 | ||
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|phase1_expression=4.54195948176392,5.1384125733836,6.62485699251064,3.00219895059391,9.38618298297304,0.872338524100369,0,4.42203911398782,2.08948502559871,0.491467873003018,0,0,0,0.990130823680373,0,2.01697543935533,0.602694528023977,2.19093027116212,1.95173119516203,1.60057375499824,2.85600967741954,0,3.14859585844162,6.43309797842556,6.52821725892975,14.9006141208505,20.7714491308363,18.3396120460873,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,75.5801285573281,8.71911117614727,6.64885321586358,1.80719576192283,0.50133791063589,1.15877215168659,0.795285947051099,0,4.63220604103932,10.4212816807405,20.8168442092709,3.6019245761871,0,0,0,0,0,0,0,0,4.77029777680092,4.30117297553062,4.16568601929113,7.91431118693613,7.55098985177831,6.32771496462155,4.80688423034664,3.87625138753993,2.49036383880697,1.67360306382335,0.805658634218294,0.760272105718513,0.24406205754817,3.67663080345869,4.0507097394088,4.64358587077215,3.81699933464489,8.78369547769913,0,1.89853131913626,1.64881569537367,0,0,0,6.46063537203914,13.8027257714392,48.4617601776381,26.1021324881421,10.2853830837524,19.6237160049807,2.1349799145941,27.6267654227219,52.5946649825605,9.96858973315692,14.0577236677575,1.96764655938411,4.60940739583999,1.64025002283658,3.1216007683032,1.1409436430889,2.39117888882882,3.28816596202542,2.42809416552197,4.49442581447195,5.71631679513701,2.08818339430006,6.30287265172169,9.50402285825643,11.3742787468136,3.64064544775211,4.31170885089743,5.05008341862199,8.50805935129356,20.7798086613137,11.8523957637826,3.0648779579902,7.06118876861005,5.78504134116107,1.79389635688862,0.85422955527427,1.69545520927649,2.10063767259082,0.92747276314595,2.83404594050192,3.7223371266318,4.21940830603166,1.16924406193438,3.5340728394176,1.38074847963449,0.969876340912871,1.77504796258307,1.30977727695932,1.86516651541536,0,0,0.573609190778008,2.80539524098069,4.5060121229305,2.32387885739037,6.73796857599908,4.28945446488568,3.28479623168247,3.12899064659632,0.643240938192885,1.38134921352481,3.25057549622385,1.44375896333917,0,0,0,0,0,0,0,0.196221465125346,0,0,1.40241773803446,2.057870056657,1.47008711385542,0,0,5.90789906681404,0,0,3.08822058537346,0.109750285408626,0,0.201057944823262,0,0.651616610620649,8.31947828223663,11.5465073620219,2.89826012437692,116.586833376171,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0.492663237895943,0,3.10992173311158,2.73827911492227,1.76739406796932,1.20645999155121,0.381988425558278,0,5.13217338068116,0.308482478109971,0,0.571652865261156,0.672786506072164,0.87192013766656,1.466765716419,7.23921608243556,3.57656445851882,6.762422020448,1.86156681609409,2.08014873822732,2.31486636835928,1.41849132023278,3.19706614819319,3.71742783511184,0.542621605391443,0,7.81766842304964,2.48774364119782,2.37585561880029,22.607953279469,3.48613383440118,10.1972451005698,0,0,0,4.31324739884849,2.29723871668228,2.85273810081437,8.39731578671959,5.13690806375959,3.40215830155802,0,0,0,0,8.63921722356376,29.932166387253,19.3322203194424,19.9344355747875,12.7587750330633,0,0,0,2.33113834266366,1.50051156317903,1.35632511849868,1.45579603071565,2.3195768543631,0.946214490203608,2.34282829985426,3.31040709700491,0,0,6.64225598535437,11.6152576181273,3.5622281931914,0.391602314925481,1.37257369524342,0,0,0,0,0,0.604780586659361,1.24053903909388,1.53461973288062,1.12264037773229,2.05022638809122,2.55853624533352,3.37793234401576,1.48418066444991,3.70103265126373,5.50441348470694,4.18848495670427,11.9428518712233,1.85936605535935,0.120859449591622,0,0,20.3221573251354,11.4717435844232,13.6369391557801,0.451199612907412,2.92658280996776,0,0,0.211103257785751,2.27466768141793,5.61309227412502,6.26156156696204,1.54227252690289,0.541892875087706,0,0.509752546090077,0.831076008928724,0,0,0,0,0.328014645699706,0.325378394664303,1.75169719801128,1.00726411300178,0.907604499126468,0,0,6.42735719376638,1.06337790121334,4.77550713055398,2.76306614507033,3.58375088459779,2.90034661144339,1.59518363305651,6.13631717395926,4.98579399621729,0,0,0,0,1.85938219718914,28.018298867927,3.485186350803,21.5623506123262,12.2430386972915,4.34966496037536,2.22389062924704,83.4418089705809,3.72158369359667,32.5870807460288,29.1664196703452,1.79128453917934,1.28381696410176,21.0014143631118,6.27958912159384,5.75591864266607,11.2560182191782,9.42499218765492,13.7484087469855,22.1914449642212,9.26768603725758,1.46290121726877,14.8665228675083,1.05650146756755,11.1929927354548,35.2099525564745,32.7723538198704,4.96228809191512,82.9298719051525,104.789761575649,0.578775534266688,1.9676842561399,13.1891745025758,3.717881977197,1.69017361519345,2.00775893085672,0.491245205065606,12.840157853325,7.44998234548255,1.68886108238131,1.31717957183961,2.65631221636001,4.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| ||
|short_description=p2@CACNA2D1 | |short_description=p2@CACNA2D1 | ||
}} | }} |
Latest revision as of 18:36, 19 September 2015
Short description: | p2@CACNA2D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CACNA2D1_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000356860_5end |
EntrezGene: | CACNA2D1 |
HGNC: | 1399 |
UniProt: | P54289 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 6.93e-13 | 61 |
electrically active cell | 6.93e-13 | 61 |
muscle precursor cell | 7.38e-12 | 58 |
myoblast | 7.38e-12 | 58 |
multi-potent skeletal muscle stem cell | 7.38e-12 | 58 |
muscle cell | 3.11e-11 | 55 |
smooth muscle cell | 1.44e-09 | 43 |
smooth muscle myoblast | 1.44e-09 | 43 |
cardiocyte | 2.59e-09 | 16 |
vascular associated smooth muscle cell | 2.09e-08 | 32 |
fibroblast | 5.69e-08 | 76 |
mesodermal cell | 2.47e-07 | 121 |