FFCP PHASE1:Hg19::chr3:89156832..89156848,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2042 | |EntrezGene=2042 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3387 | |HGNC=3387 | ||
|TSSclassifier=strong | |||
|UniProt=C9JXA2 | |UniProt=C9JXA2 | ||
|association_with_transcript=6bp_to_ENST00000494014_5end | |association_with_transcript=6bp_to_ENST00000494014_5end | ||
|cluster_id=chr3:89156832..89156848,+ | |||
|coexpression_cluster_id=C214 | |coexpression_cluster_id=C214 | ||
|description=CAGE_peak_2_at_EPHA3_5end | |description=CAGE_peak_2_at_EPHA3_5end | ||
|id=chr3:89156832..89156848,+ | |id=chr3:89156832..89156848,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.41e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001950;6.22e-17;20!UBERON:0002619;7.45e-15;22!UBERON:0000956;2.31e-12;25!UBERON:0000203;2.31e-12;25!UBERON:0001869;1.44e-09;32!UBERON:0002791;2.38e-09;32!UBERON:0001893;4.09e-09;34!UBERON:0003528;5.53e-09;34!UBERON:0002020;5.53e-09;34!UBERON:0000922;7.94e-09;49!UBERON:0002780;3.55e-08;41!UBERON:0001890;3.55e-08;41!UBERON:0000073;1.21e-07;53!UBERON:0002616;1.21e-07;53!UBERON:0001016;1.83e-07;83!UBERON:0001017;3.39e-07;75!UBERON:0007023;4.06e-07;114!UBERON:0001871;7.34e-07;6 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.06e-30!115;UBERON:0000073!1.82e-24!94;UBERON:0001016!1.82e-24!94;UBERON:0005743!5.22e-24!86;UBERON:0001017!4.97e-23!82;UBERON:0001049!5.07e-19!57;UBERON:0005068!5.07e-19!57;UBERON:0006241!5.07e-19!57;UBERON:0007135!5.07e-19!57;UBERON:0000955!8.22e-18!69;UBERON:0006238!8.22e-18!69;UBERON:0002616!1.38e-17!59;UBERON:0000924!5.93e-17!173;UBERON:0006601!5.93e-17!173;UBERON:0004121!1.14e-16!169;UBERON:0002346!1.42e-15!90;UBERON:0003075!1.97e-15!86;UBERON:0007284!1.97e-15!86;UBERON:0003080!3.54e-14!42;UBERON:0002780!1.51e-13!41;UBERON:0001890!1.51e-13!41;UBERON:0006240!1.51e-13!41;UBERON:0000153!3.20e-13!129;UBERON:0007811!3.20e-13!129;UBERON:0000033!1.20e-12!123;UBERON:0001950!1.23e-12!20;UBERON:0002020!2.98e-12!34;UBERON:0003528!2.98e-12!34;UBERON:0000475!3.05e-12!365;UBERON:0001893!3.11e-12!34;UBERON:0002791!7.82e-12!33;UBERON:0002619!7.95e-12!22;UBERON:0001869!9.94e-12!32;UBERON:0000956!3.29e-11!25;UBERON:0000203!3.29e-11!25;UBERON:0000481!5.49e-11!347;UBERON:0003056!2.28e-09!61;UBERON:0000468!6.31e-09!659;UBERON:0000477!8.40e-08!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.22e-17;20!UBERON:0002619;7.45e-15;22!UBERON:0000956;2.31e-12;25!UBERON:0000203;2.31e-12;25!UBERON:0001869;1.44e-09;32!UBERON:0002791;2.38e-09;32!UBERON:0001893;4.09e-09;34!UBERON:0003528;5.53e-09;34!UBERON:0002020;5.53e-09;34!UBERON:0000922;7.94e-09;49!UBERON:0002780;3.55e-08;41!UBERON:0001890;3.55e-08;41!UBERON:0000073;1.21e-07;53!UBERON:0002616;1.21e-07;53!UBERON:0001016;1.83e-07;83!UBERON:0001017;3.39e-07;75!UBERON:0007023;4.06e-07;114!UBERON:0001871;7.34e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.77e-27,114;UBERON:0011216,1.78e-19,223;UBERON:0001950,4.31e-17,20;UBERON:0001017,7.55e-17,81;UBERON:0001016,1.21e-16,89;UBERON:0002619,5.37e-15,22;UBERON:0001049,9.80e-15,56;UBERON:0005068,9.80e-15,56;UBERON:0006241,9.80e-15,56;UBERON:0007135,9.80e-15,56;UBERON:0000073,6.11e-13,53;UBERON:0002616,6.11e-13,53;UBERON:0000956,1.75e-12,25;UBERON:0000203,1.75e-12,25;UBERON:0000955,1.09e-11,68;UBERON:0006238,1.09e-11,68;UBERON:0002780,4.84e-11,41;UBERON:0001890,4.84e-11,41;UBERON:0003080,4.84e-11,41;UBERON:0006240,4.84e-11,41;UBERON:0002791,1.44e-10,32;UBERON:0001893,1.45e-10,34;UBERON:0001869,1.59e-10,32;UBERON:0003528,1.99e-10,34;UBERON:0002020,1.99e-10,34;UBERON:0002346,3.78e-10,86;UBERON:0004121,7.23e-10,171;UBERON:0000924,7.23e-10,171;UBERON:0006601,7.23e-10,171;UBERON:0003075,1.29e-09,82;UBERON:0007284,1.29e-09,82;UBERON:0010314,4.94e-08,132;UBERON:0010371,1.51e-07,104;UBERON:0001871,5.52e-07,6 | |||
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| ||
|short_description=p2@EPHA3 | |short_description=p2@EPHA3 | ||
}} | }} |
Latest revision as of 19:22, 19 September 2015
Short description: | p2@EPHA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EPHA3_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 6bp_to_ENST00000494014_5end |
EntrezGene: | EPHA3 |
HGNC: | 3387 |
UniProt: | C9JXA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.77e-27 | 114 |
organ system subdivision | 1.78e-19 | 223 |
neocortex | 4.31e-17 | 20 |
central nervous system | 7.55e-17 | 81 |
nervous system | 1.21e-16 | 89 |
regional part of cerebral cortex | 5.37e-15 | 22 |
neural tube | 9.80e-15 | 56 |
neural rod | 9.80e-15 | 56 |
future spinal cord | 9.80e-15 | 56 |
neural keel | 9.80e-15 | 56 |
regional part of nervous system | 6.11e-13 | 53 |
regional part of brain | 6.11e-13 | 53 |
cerebral cortex | 1.75e-12 | 25 |
pallium | 1.75e-12 | 25 |
brain | 1.09e-11 | 68 |
future brain | 1.09e-11 | 68 |
regional part of forebrain | 4.84e-11 | 41 |
forebrain | 4.84e-11 | 41 |
anterior neural tube | 4.84e-11 | 41 |
future forebrain | 4.84e-11 | 41 |
regional part of telencephalon | 1.44e-10 | 32 |
telencephalon | 1.45e-10 | 34 |
cerebral hemisphere | 1.59e-10 | 32 |
brain grey matter | 1.99e-10 | 34 |
gray matter | 1.99e-10 | 34 |
neurectoderm | 3.78e-10 | 86 |
ectoderm-derived structure | 7.23e-10 | 171 |
ectoderm | 7.23e-10 | 171 |
presumptive ectoderm | 7.23e-10 | 171 |
neural plate | 1.29e-09 | 82 |
presumptive neural plate | 1.29e-09 | 82 |
structure with developmental contribution from neural crest | 4.94e-08 | 132 |
ecto-epithelium | 1.51e-07 | 104 |
temporal lobe | 5.52e-07 | 6 |