FFCP PHASE1:Hg19::chr3:89156832..89156848,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:89156832..89156848,+ to FFCP PHASE1:Hg19::chr3:89156832..89156848,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2042 | |EntrezGene=2042 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3387 | |HGNC=3387 | ||
|TSSclassifier=strong | |||
|UniProt=C9JXA2 | |UniProt=C9JXA2 | ||
|association_with_transcript=6bp_to_ENST00000494014_5end | |||
|cluster_id=chr3:89156832..89156848,+ | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_2_at_EPHA3_5end | |||
|id=chr3:89156832..89156848,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.41e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.06e-30!115;UBERON:0000073!1.82e-24!94;UBERON:0001016!1.82e-24!94;UBERON:0005743!5.22e-24!86;UBERON:0001017!4.97e-23!82;UBERON:0001049!5.07e-19!57;UBERON:0005068!5.07e-19!57;UBERON:0006241!5.07e-19!57;UBERON:0007135!5.07e-19!57;UBERON:0000955!8.22e-18!69;UBERON:0006238!8.22e-18!69;UBERON:0002616!1.38e-17!59;UBERON:0000924!5.93e-17!173;UBERON:0006601!5.93e-17!173;UBERON:0004121!1.14e-16!169;UBERON:0002346!1.42e-15!90;UBERON:0003075!1.97e-15!86;UBERON:0007284!1.97e-15!86;UBERON:0003080!3.54e-14!42;UBERON:0002780!1.51e-13!41;UBERON:0001890!1.51e-13!41;UBERON:0006240!1.51e-13!41;UBERON:0000153!3.20e-13!129;UBERON:0007811!3.20e-13!129;UBERON:0000033!1.20e-12!123;UBERON:0001950!1.23e-12!20;UBERON:0002020!2.98e-12!34;UBERON:0003528!2.98e-12!34;UBERON:0000475!3.05e-12!365;UBERON:0001893!3.11e-12!34;UBERON:0002791!7.82e-12!33;UBERON:0002619!7.95e-12!22;UBERON:0001869!9.94e-12!32;UBERON:0000956!3.29e-11!25;UBERON:0000203!3.29e-11!25;UBERON:0000481!5.49e-11!347;UBERON:0003056!2.28e-09!61;UBERON:0000468!6.31e-09!659;UBERON:0000477!8.40e-08!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.22e-17;20!UBERON:0002619;7.45e-15;22!UBERON:0000956;2.31e-12;25!UBERON:0000203;2.31e-12;25!UBERON:0001869;1.44e-09;32!UBERON:0002791;2.38e-09;32!UBERON:0001893;4.09e-09;34!UBERON:0003528;5.53e-09;34!UBERON:0002020;5.53e-09;34!UBERON:0000922;7.94e-09;49!UBERON:0002780;3.55e-08;41!UBERON:0001890;3.55e-08;41!UBERON:0000073;1.21e-07;53!UBERON:0002616;1.21e-07;53!UBERON:0001016;1.83e-07;83!UBERON:0001017;3.39e-07;75!UBERON:0007023;4.06e-07;114!UBERON:0001871;7.34e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.77e-27,114;UBERON:0011216,1.78e-19,223;UBERON:0001950,4.31e-17,20;UBERON:0001017,7.55e-17,81;UBERON:0001016,1.21e-16,89;UBERON:0002619,5.37e-15,22;UBERON:0001049,9.80e-15,56;UBERON:0005068,9.80e-15,56;UBERON:0006241,9.80e-15,56;UBERON:0007135,9.80e-15,56;UBERON:0000073,6.11e-13,53;UBERON:0002616,6.11e-13,53;UBERON:0000956,1.75e-12,25;UBERON:0000203,1.75e-12,25;UBERON:0000955,1.09e-11,68;UBERON:0006238,1.09e-11,68;UBERON:0002780,4.84e-11,41;UBERON:0001890,4.84e-11,41;UBERON:0003080,4.84e-11,41;UBERON:0006240,4.84e-11,41;UBERON:0002791,1.44e-10,32;UBERON:0001893,1.45e-10,34;UBERON:0001869,1.59e-10,32;UBERON:0003528,1.99e-10,34;UBERON:0002020,1.99e-10,34;UBERON:0002346,3.78e-10,86;UBERON:0004121,7.23e-10,171;UBERON:0000924,7.23e-10,171;UBERON:0006601,7.23e-10,171;UBERON:0003075,1.29e-09,82;UBERON:0007284,1.29e-09,82;UBERON:0010314,4.94e-08,132;UBERON:0010371,1.51e-07,104;UBERON:0001871,5.52e-07,6 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,1.0007329835313,1.34088328328186,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,1.84681587115182,0.408001382488506,1.56727360739044,0.572471974262113,0.547497700291537,0,0.458480434487708,0.164201178899891,0.236132343941038,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53435074212236,0,0,0.289693037921647,0,0,0,0.443458794925128,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.549605231791222,0,0,0,0.496971951695318,0.12663051166458,0,1.14734648299525,0,1.12135520028461,0,0,0.933633106199299,1.48181739276657,0.163461903113459,0.908144565869588,1.15235184896,0,0,0,0,0,0,0,0,0.982674538494144,1.03325781175765,2.37600571456411,0,2.73048408581408,2.87447256726495,1.0100166837244,1.25118519871964,0.277064115484183,0,0.612975591598039,0.150238058906597,0.113432183160021,0.538168907066586,0,0,0,0,3.09168648054755,1.48893485065272,15.189869901714,14.8104247845022,0.252433774244115,0,0,2.84007674013291,0.604512589365842,0.339121184620975,0,0,0,0,0.132529768321485,0.580969714347592,3.42081481550722,0.252320850875628,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0.587043471179108,0,0,0,0.790204397959275,0,0,0,0,0,0.839910640994298,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,2.32689088364,0,0,0,0,0,0,0.532844358032199,2.00169191121407,1.62786481617433,0,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,1.52456774533478,117.12586847186,61.8631050222156,41.8790663335872,54.2247938905189,0,0,0,2.4538298343828,1.00034104211935,0.542530047399471,0.207970861530807,0,0,0,7.52365249319297,4.5481500811197,2.0694614258501,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.561320188866147,0,1.53512174720011,0.64341568457443,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,10.9073725756376,3.27764102412091,3.67148361886388,0,0,0,0,0,0,0,0.431831832204279,0,0.541892875087706,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.976135183992909,3.09123034943167,5.31102895946392,9.15855449118527,0,0,0,0.48335359146061,1.3864375540318,1.99554777143968,0.551346289938122,2.36324538710202,1.16013355131383,0.852266274161009,5.2528901031575,0,0,0,0.10115778085555,0,0,0,2.7723022215848,0,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0,0,0.42793898803392,0,0,1.61885211824983,1.92175920815238,2.12062324222236,0,0,0,0,0,0,1.36499911407986,2.96951407102797,0,0,0,1.31535265576129,0,0,0.811641507850816,0,0,0.860468113224309,0.687743287091848,0,0,0,0,0,0,0,0.670302275535787,0,3.85989583184795,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,12.9135280910346,0,0,0,0,0,7.30350972906215,0,0,0,0,0,0,0,0,0,0,0,2.50565556505718,11.0778659052941,0,0,0,0,8.35096621849796,8.1311549572174,0.222886768554957,0,0,0.296964680832639,0,10.9356241254293,1.54736358051564,0.222617410045812,0,0,5.18044769452781,1.65770349318689,0.503865495708552,3.98847861758404,5.04647702390385,0,0,0,0,7.99011585659162,0,0,0.969332746095218,2.41197055220813,21.9575177801314,0,0,7.24999575434793,0,0,14.89242395138,0.344743373241465,4.08246458736556,1.73624994933292,0.885741385813839,0.241192877250816,1.52581736317083,0.110579259931225,0.295547618953547,1.31631238292384,0,0.41827123283581,8.0028268843949,1.02547850262301,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0.865554558968364,5.97157158647103,1.32686346755009,2.4441205797345,0,0,0,0.337005664903385,6.42062117839031,0.937057782901357,0,0,2.91336455440911,0,6.04953580243319,70.3967351750127,9.35161378501622,1.20258735531594,0.933193722575224,0,0,0,0,0,0.138674673013139,3.12407529003236,0.195984794828755,0,1.04836000945218,1.54787429224455,0,0,0,3.78257164304836,0,5.19755703795225,0,0,3.98858014522036,0,0,9.39193176853151,0,0,0.458146384663663,3.77508995296322,0,0,0,0,0,0,5.49006120812886,0,0.958337652243951,0,0,0,14.5226848661572,5.72901060029209,2.87149209830726,0.599037001496973,2.14613024068285,2.23171457441873,5.84496210634518,0,0,0,0,0,0,0.169346664131569,0,0.817220436669454,0.160753148465019,0.275078873194468,0,0,0,3.76647251279753,0,0.86686278029118,0.314727528809989,0,9.68151632397362,0,3.57347663186684,0.662091970365432,0,0,0,0,0,0,0.851940108927109,0,4.10346254298631,1.32506888912221,1.0342636508924,0.79339561045614,0,0,1.28144895081234,8.80344108558129,1.24271716604159,2.48083010905975,0,0,0,0.544017803369474,1.2534494701135,0.919036730290385,0.327872630709804,0,1.77213635993397,1.95242023843141,1.1267183763585,1.14681839138014,1.44207766997908,1.36612086471044,0.138348634936231,0.249960815924213,3.7912279385412,2.56918800190471,0,2.81000943484129,0.724605143054126,0,0,0.55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| ||
|short_description=p2@EPHA3 | |||
}} | }} |
Latest revision as of 19:22, 19 September 2015
Short description: | p2@EPHA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EPHA3_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 6bp_to_ENST00000494014_5end |
EntrezGene: | EPHA3 |
HGNC: | 3387 |
UniProt: | C9JXA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.77e-27 | 114 |
organ system subdivision | 1.78e-19 | 223 |
neocortex | 4.31e-17 | 20 |
central nervous system | 7.55e-17 | 81 |
nervous system | 1.21e-16 | 89 |
regional part of cerebral cortex | 5.37e-15 | 22 |
neural tube | 9.80e-15 | 56 |
neural rod | 9.80e-15 | 56 |
future spinal cord | 9.80e-15 | 56 |
neural keel | 9.80e-15 | 56 |
regional part of nervous system | 6.11e-13 | 53 |
regional part of brain | 6.11e-13 | 53 |
cerebral cortex | 1.75e-12 | 25 |
pallium | 1.75e-12 | 25 |
brain | 1.09e-11 | 68 |
future brain | 1.09e-11 | 68 |
regional part of forebrain | 4.84e-11 | 41 |
forebrain | 4.84e-11 | 41 |
anterior neural tube | 4.84e-11 | 41 |
future forebrain | 4.84e-11 | 41 |
regional part of telencephalon | 1.44e-10 | 32 |
telencephalon | 1.45e-10 | 34 |
cerebral hemisphere | 1.59e-10 | 32 |
brain grey matter | 1.99e-10 | 34 |
gray matter | 1.99e-10 | 34 |
neurectoderm | 3.78e-10 | 86 |
ectoderm-derived structure | 7.23e-10 | 171 |
ectoderm | 7.23e-10 | 171 |
presumptive ectoderm | 7.23e-10 | 171 |
neural plate | 1.29e-09 | 82 |
presumptive neural plate | 1.29e-09 | 82 |
structure with developmental contribution from neural crest | 4.94e-08 | 132 |
ecto-epithelium | 1.51e-07 | 104 |
temporal lobe | 5.52e-07 | 6 |