FFCP PHASE1:Hg19::chr11:67771513..67771604,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:67771513..67771604,- to FFCP PHASE1:Hg19::chr11:67771513..67771604,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81622 | |EntrezGene=81622 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13481 | |HGNC=13481 | ||
|TSSclassifier=strong | |||
|UniProt=A6NGZ7,Q9H1C4,E9PR93,E9PI69,Q05BS6,Q58F16 | |UniProt=A6NGZ7,Q9H1C4,E9PR93,E9PI69,Q05BS6,Q58F16 | ||
|association_with_transcript=0bp_to_ENST00000227471,ENST00000524455,ENST00000530138,ENST00000530331,ENST00000531152,ENST00000533424,NM_030930,uc001omw.1_5end | |||
|cluster_id=chr11:67771513..67771604,- | |||
|coexpression_cluster_id=C691 | |||
|description=CAGE_peak_1_at_UNC93B1_5end | |||
|id=chr11:67771513..67771604,- | |||
|ontology_enrichment_celltype=CL:0000766!1.62e-35!76;CL:0002194!1.15e-32!63;CL:0000576!1.15e-32!63;CL:0000040!1.15e-32!63;CL:0000559!1.15e-32!63;CL:0002009!4.94e-30!65;CL:0000557!1.48e-29!71;CL:0000839!9.96e-29!70;CL:0000763!4.54e-23!112;CL:0000049!4.54e-23!112;CL:0002057!5.45e-23!42;CL:0000860!1.07e-22!45;CL:0000738!3.53e-20!140;CL:0002087!1.18e-19!119;CL:0000037!1.45e-17!172;CL:0000566!1.45e-17!172;CL:0000988!8.10e-17!182;CL:0002032!2.92e-16!165;CL:0000837!2.92e-16!165;CL:0002031!9.17e-16!124;CL:0000063!1.38e-11!578;CL:0002320!1.67e-10!365;CL:0000134!3.45e-09!358;CL:0000219!1.33e-07!390;CL:0002393!2.86e-07!9;CL:0002397!2.86e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.38e-17;48!CL:0000473;1.32e-16;39!CL:0000234;1.32e-16;39!CL:0000860;8.99e-16;33!CL:0002057;8.99e-16;33!CL:0000766;6.83e-15;69!CL:0000763;5.99e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.05e-35,72;CL:0002194,5.31e-33,59;CL:0000576,5.31e-33,59;CL:0000040,5.31e-33,59;CL:0000559,5.31e-33,59;CL:0002009,3.07e-30,61;CL:0000557,1.18e-29,67;CL:0000839,8.14e-29,66;CL:0000473,5.54e-27,48;CL:0000234,5.54e-27,48;CL:0000860,5.45e-23,42;CL:0002057,5.45e-23,42;CL:0000763,9.34e-23,108;CL:0000049,9.34e-23,108;CL:0000738,8.47e-20,136;CL:0002087,2.65e-19,115;CL:0000037,3.74e-17,168;CL:0000988,7.24e-17,177;CL:0002032,7.47e-16,161;CL:0000837,7.47e-16,161;CL:0002031,2.14e-15,120;CL:0002320,1.77e-10,361;CL:0000134,3.65e-09,354;CL:0000219,1.43e-07,386;CL:0002393,2.86e-07,9;CL:0002397,2.86e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-16;42!CL:0000049;1.60e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.52e-27!102;UBERON:0003061!5.52e-27!102;UBERON:0002371!2.41e-26!80;UBERON:0002193!2.03e-24!112;UBERON:0001474!2.51e-24!86;UBERON:0002405!6.52e-20!115;UBERON:0004765!2.32e-19!101;UBERON:0001434!2.32e-19!101;UBERON:0003081!6.67e-12!216;UBERON:0002384!2.07e-09!375;UBERON:0000926!1.59e-08!448;UBERON:0004120!1.59e-08!448;UBERON:0006603!1.59e-08!448;UBERON:0002204!1.90e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.29e-27,98;UBERON:0003061,9.29e-27,98;UBERON:0002371,2.93e-26,76;UBERON:0001474,3.72e-24,82;UBERON:0002193,4.04e-24,108;UBERON:0004765,5.14e-23,90;UBERON:0002405,1.71e-21,93;UBERON:0001434,9.34e-20,100;UBERON:0003081,5.63e-11,203;UBERON:0002384,2.21e-09,371;UBERON:0002204,1.91e-07,167 | |||
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| ||
|short_description=p1@UNC93B1 | |||
}} | }} |
Latest revision as of 19:31, 19 September 2015
Short description: | p1@UNC93B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UNC93B1_5end |
Coexpression cluster: | C691_Monocytederived_CD14_Macrophage_CD19_Dendritic_immature_Whole |
Association with transcript: | 0bp_to_ENST00000227471, ENST00000524455, ENST00000530138, ENST00000530331, ENST00000531152, ENST00000533424, NM_030930, uc001omw.1_5end |
EntrezGene: | UNC93B1 |
HGNC: | 13481 |
UniProt: | A6NGZ7Q9H1C4E9PR93E9PI69Q05BS6Q58F16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.05e-35 | 72 |
monopoietic cell | 5.31e-33 | 59 |
monocyte | 5.31e-33 | 59 |
monoblast | 5.31e-33 | 59 |
promonocyte | 5.31e-33 | 59 |
macrophage dendritic cell progenitor | 3.07e-30 | 61 |
granulocyte monocyte progenitor cell | 1.18e-29 | 67 |
myeloid lineage restricted progenitor cell | 8.14e-29 | 66 |
defensive cell | 5.54e-27 | 48 |
phagocyte | 5.54e-27 | 48 |
classical monocyte | 5.45e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.45e-23 | 42 |
myeloid cell | 9.34e-23 | 108 |
common myeloid progenitor | 9.34e-23 | 108 |
leukocyte | 8.47e-20 | 136 |
nongranular leukocyte | 2.65e-19 | 115 |
hematopoietic stem cell | 3.74e-17 | 168 |
hematopoietic cell | 7.24e-17 | 177 |
hematopoietic oligopotent progenitor cell | 7.47e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.47e-16 | 161 |
hematopoietic lineage restricted progenitor cell | 2.14e-15 | 120 |
connective tissue cell | 1.77e-10 | 361 |
mesenchymal cell | 3.65e-09 | 354 |
motile cell | 1.43e-07 | 386 |
intermediate monocyte | 2.86e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.86e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.29e-27 | 98 |
blood island | 9.29e-27 | 98 |
bone marrow | 2.93e-26 | 76 |
bone element | 3.72e-24 | 82 |
hemolymphoid system | 4.04e-24 | 108 |
skeletal element | 5.14e-23 | 90 |
immune system | 1.71e-21 | 93 |
skeletal system | 9.34e-20 | 100 |
lateral plate mesoderm | 5.63e-11 | 203 |
connective tissue | 2.21e-09 | 371 |
musculoskeletal system | 1.91e-07 | 167 |