FFCP PHASE1:Hg19::chr11:67777751..67777808,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:67777751..67777808,+
|short_description=p1@ALDH3B1
|description=CAGE_peak_1_at_ALDH3B1_5end
|association_with_transcript=0bp_to_ENST00000007633,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221 | |EntrezGene=221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=410 | |HGNC=410 | ||
|UniProt=A3FMP9, | |TSSclassifier=strong | ||
|UniProt=A3FMP9,P43353 | |||
|association_with_transcript=0bp_to_ENST00000007633,ENST00000316367,ENST00000342456,ENST00000529232,NM_000694,NM_001030010,uc001omy.1,uc001omz.2,uc001ona.2_5end | |||
|cluster_id=chr11:67777751..67777808,+ | |||
|description=CAGE_peak_1_at_ALDH3B1_5end | |||
|id=chr11:67777751..67777808,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.27e-30!76;CL:0000839!2.57e-28!70;CL:0000557!2.18e-27!71;CL:0002194!2.18e-27!63;CL:0000576!2.18e-27!63;CL:0000040!2.18e-27!63;CL:0000559!2.18e-27!63;CL:0002009!1.50e-25!65;CL:0000860!6.41e-22!45;CL:0002057!2.19e-21!42;CL:0000763!1.08e-18!112;CL:0000049!1.08e-18!112;CL:0002320!4.40e-16!365;CL:0000012!2.17e-14!682;CL:0000048!2.68e-14!430;CL:0000548!2.72e-14!679;CL:0000004!2.72e-14!679;CL:0000255!2.72e-14!679;CL:0000134!6.77e-14!358;CL:0000723!2.01e-12!436;CL:0000219!1.38e-11!390;CL:0000034!5.90e-11!444;CL:0000144!7.10e-10!625;CL:0000057!9.43e-10!75;CL:0000055!1.02e-09!180;CL:0000063!1.15e-09!578;CL:0002371!1.83e-09!591;CL:0000003!9.37e-09!722;CL:0002393!5.38e-07!9;CL:0002397!5.38e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.13e-15;39!CL:0000234;1.13e-15;39!CL:0000576;3.31e-15;48!CL:0000860;1.23e-14;33!CL:0002057;1.23e-14;33!CL:0000766;3.71e-14;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.32e-30,72;CL:0000839,4.72e-28,66;CL:0002194,3.59e-27,59;CL:0000576,3.59e-27,59;CL:0000040,3.59e-27,59;CL:0000559,3.59e-27,59;CL:0000557,6.14e-27,67;CL:0000473,2.25e-25,48;CL:0000234,2.25e-25,48;CL:0002009,4.17e-25,61;CL:0000860,1.42e-21,42;CL:0002057,1.42e-21,42;CL:0000763,1.23e-17,108;CL:0000049,1.23e-17,108;CL:0002320,1.64e-16,361;CL:0000048,5.36e-15,427;CL:0000134,2.78e-14,354;CL:0000723,3.33e-13,433;CL:0000219,5.85e-12,386;CL:0000034,8.72e-12,441;CL:0000057,6.76e-10,76;CL:0002393,4.78e-07,9;CL:0002397,4.78e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;7.09e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.04e-27!80;UBERON:0001474!9.08e-26!86;UBERON:0002204!1.67e-24!167;UBERON:0004765!2.42e-24!101;UBERON:0001434!2.42e-24!101;UBERON:0002390!3.13e-23!102;UBERON:0003061!3.13e-23!102;UBERON:0002193!2.02e-20!112;UBERON:0000926!1.22e-18!448;UBERON:0004120!1.22e-18!448;UBERON:0006603!1.22e-18!448;UBERON:0002405!3.64e-17!115;UBERON:0002384!1.98e-15!375;UBERON:0003081!1.03e-12!216;UBERON:0000062!2.06e-10!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.32e-27,76;UBERON:0002204,1.28e-25,167;UBERON:0001434,2.92e-25,100;UBERON:0004765,3.74e-25,90;UBERON:0001474,4.88e-25,82;UBERON:0002390,9.44e-23,98;UBERON:0003061,9.44e-23,98;UBERON:0002193,6.07e-20,108;UBERON:0002405,1.61e-19,93;UBERON:0002384,6.67e-16,371;UBERON:0000926,4.16e-15,315;UBERON:0004120,4.16e-15,315;UBERON:0006603,4.16e-15,315;UBERON:0003081,2.27e-12,203 | |||
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| ||
|short_description=p1@ALDH3B1 | |||
}} | }} |
Latest revision as of 19:32, 19 September 2015
Short description: | p1@ALDH3B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALDH3B1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000007633, ENST00000316367, ENST00000342456, ENST00000529232, NM_000694, NM_001030010, uc001omy.1, uc001omz.2, uc001ona.2_5end |
EntrezGene: | ALDH3B1 |
HGNC: | 410 |
UniProt: | A3FMP9P43353 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.32e-30 | 72 |
myeloid lineage restricted progenitor cell | 4.72e-28 | 66 |
monopoietic cell | 3.59e-27 | 59 |
monocyte | 3.59e-27 | 59 |
monoblast | 3.59e-27 | 59 |
promonocyte | 3.59e-27 | 59 |
granulocyte monocyte progenitor cell | 6.14e-27 | 67 |
defensive cell | 2.25e-25 | 48 |
phagocyte | 2.25e-25 | 48 |
macrophage dendritic cell progenitor | 4.17e-25 | 61 |
classical monocyte | 1.42e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.42e-21 | 42 |
myeloid cell | 1.23e-17 | 108 |
common myeloid progenitor | 1.23e-17 | 108 |
connective tissue cell | 1.64e-16 | 361 |
multi fate stem cell | 5.36e-15 | 427 |
mesenchymal cell | 2.78e-14 | 354 |
somatic stem cell | 3.33e-13 | 433 |
motile cell | 5.85e-12 | 386 |
stem cell | 8.72e-12 | 441 |
fibroblast | 6.76e-10 | 76 |
intermediate monocyte | 4.78e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.32e-27 | 76 |
musculoskeletal system | 1.28e-25 | 167 |
skeletal system | 2.92e-25 | 100 |
skeletal element | 3.74e-25 | 90 |
bone element | 4.88e-25 | 82 |
hematopoietic system | 9.44e-23 | 98 |
blood island | 9.44e-23 | 98 |
hemolymphoid system | 6.07e-20 | 108 |
immune system | 1.61e-19 | 93 |
connective tissue | 6.67e-16 | 371 |
mesoderm | 4.16e-15 | 315 |
mesoderm-derived structure | 4.16e-15 | 315 |
presumptive mesoderm | 4.16e-15 | 315 |
lateral plate mesoderm | 2.27e-12 | 203 |