FFCP PHASE1:Hg19::chrX:140336645..140336655,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64663 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14331 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NY87 | |||
|association_with_transcript=0bp_to_NM_022661,uc004fbk.2_5end | |||
|cluster_id=chrX:140336645..140336655,- | |||
|coexpression_cluster_id=C312 | |||
|description=CAGE_peak_1_at_SPANXC_5end | |||
|id=chrX:140336645..140336655,- | |||
|ontology_enrichment_celltype=CL:0002178!1.75e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.03e-17;1!CL:1000415;7.98e-10;2!CL:0000054;1.57e-09;2!CL:0000159;1.57e-09;2!CL:0000137;1.57e-09;2!CL:0000092;1.57e-09;2!CL:0000322;9.11e-07;3!CL:0002178;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.44e-17,1;CL:1000415,7.98e-10,2;CL:0000159,1.86e-09,2;CL:0000054,2.02e-09,2;CL:0000137,2.02e-09,2;CL:0000092,2.02e-09,2;CL:0002178,8.62e-07,3;CL:0000322,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.42e-07;10!UBERON:0005564;1.42e-07;10 | |||
|ontology_enrichment_disease=DOID:162!6.10e-10!235;DOID:14566!1.31e-09!239;DOID:305!2.94e-08!106;DOID:0050687!5.09e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:0050619;5.26e-18;1!DOID:1357;5.26e-18;1!DOID:0060085;1.03e-17;1!DOID:3165;1.03e-17;1!DOID:0060121;1.03e-17;1!DOID:2438;1.03e-17;1!DOID:3030;1.03e-17;1!DOID:4418;1.03e-17;1!DOID:200;1.57e-09;2!DOID:4305;1.57e-09;2!DOID:3910;1.57e-09;2!DOID:3493;1.57e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,5.26e-18,1;DOID:1357,5.26e-18,1;DOID:3030,1.44e-17,1;DOID:0060085,1.70e-17,1;DOID:3165,1.70e-17,1;DOID:0060121,1.70e-17,1;DOID:2438,1.70e-17,1;DOID:4418,1.70e-17,1;DOID:3493,1.44e-09,2;DOID:3910,1.71e-09,2;DOID:200,2.02e-09,2;DOID:4305,2.02e-09,2;DOID:305,2.99e-07,106;DOID:0050687,7.73e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003135!4.27e-11!11;UBERON:0000473!3.29e-10!8;UBERON:0002294!8.69e-07!7;UBERON:0001173!8.69e-07!7;UBERON:0004912!8.69e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;5.26e-18;1!UBERON:0001825;5.26e-18;1!UBERON:0004903;1.57e-09;2!UBERON:0002173;1.57e-09;2!UBERON:0002186;1.57e-09;2!UBERON:0000473;3.01e-09;8!UBERON:0002110;5.80e-07;3!UBERON:0003135;5.81e-07;11!UBERON:0004821;9.11e-07;3!UBERON:0007499;9.11e-07;3!UBERON:0003215;9.11e-07;3!UBERON:0010368;9.11e-07;3!UBERON:0009911;9.11e-07;3!UBERON:0002299;9.11e-07;3!UBERON:0006524;9.11e-07;3!UBERON:0008874;9.11e-07;3!UBERON:0002169;9.11e-07;3!UBERON:0004894;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,5.26e-18,1;UBERON:0001825,5.26e-18,1;UBERON:0004903,1.71e-09,2;UBERON:0002173,1.71e-09,2;UBERON:0002186,1.71e-09,2;UBERON:0000473,3.01e-09,8;UBERON:0002110,5.80e-07,3;UBERON:0006242,5.80e-07,3;UBERON:0003135,5.81e-07,11;UBERON:0004821,9.64e-07,3;UBERON:0003215,9.64e-07,3;UBERON:0010368,9.64e-07,3;UBERON:0009911,9.64e-07,3;UBERON:0002299,9.64e-07,3;UBERON:0006524,9.64e-07,3;UBERON:0008874,9.64e-07,3;UBERON:0002169,9.64e-07,3;UBERON:0004894,9.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,1.19228767021794,0,0,51.8627567027423,0,0.19980960958213,0,0,0,0,17.1468499080297,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0,4.19254738624465,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,2.19875734750328,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86123831398592,0,0,1.66855397145913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96409332466223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,0,0.36757959813938,0,3.41004141982077,1.60778478093707,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.358611026963382,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@SPANXC | |||
}} |
Latest revision as of 19:35, 19 September 2015
Short description: | p1@SPANXC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPANXC_5end |
Coexpression cluster: | C312_gall_squamous_small_chronic_thyroid_cholangiocellular_testicular |
Association with transcript: | 0bp_to_NM_022661, uc004fbk.2_5end |
EntrezGene: | SPANXC |
HGNC: | 14331 |
UniProt: | Q9NY87 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.44e-17 | 1 |
epithelial cell of gall bladder | 7.98e-10 | 2 |
seromucus secreting cell | 1.86e-09 | 2 |
bone matrix secreting cell | 2.02e-09 | 2 |
osteocyte | 2.02e-09 | 2 |
osteoclast | 2.02e-09 | 2 |
epithelial cell of stomach | 8.62e-07 | 3 |
pneumocyte | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 5.26e-18 | 1 |
paranasal sinus | 5.26e-18 | 1 |
bronchoalveolar duct junction | 1.71e-09 | 2 |
alveolar duct | 1.71e-09 | 2 |
bronchiole | 1.71e-09 | 2 |
testis | 3.01e-09 | 8 |
gallbladder | 5.80e-07 | 3 |
gall bladder primordium | 5.80e-07 | 3 |
male reproductive organ | 5.81e-07 | 11 |
pulmonary alveolus epithelium | 9.64e-07 | 3 |
alveolus | 9.64e-07 | 3 |
pulmonary lobule | 9.64e-07 | 3 |
lobule | 9.64e-07 | 3 |
alveolus of lung | 9.64e-07 | 3 |
alveolar system | 9.64e-07 | 3 |
pulmonary acinus | 9.64e-07 | 3 |
alveolar sac | 9.64e-07 | 3 |
alveolar wall | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 5.26e-18 | 1 |
maxillary sinus cancer | 5.26e-18 | 1 |
mucinous adenocarcinoma | 1.44e-17 | 1 |
organ system benign neoplasm | 1.70e-17 | 1 |
skin benign neoplasm | 1.70e-17 | 1 |
integumentary system benign neoplasm | 1.70e-17 | 1 |
dermis tumor | 1.70e-17 | 1 |
cutaneous fibrous histiocytoma | 1.70e-17 | 1 |
signet ring cell adenocarcinoma | 1.44e-09 | 2 |
lung adenocarcinoma | 1.71e-09 | 2 |
giant cell tumor | 2.02e-09 | 2 |
bone giant cell tumor | 2.02e-09 | 2 |
carcinoma | 2.99e-07 | 106 |
cell type cancer | 7.73e-07 | 143 |