FFCP PHASE1:Hg19::chr7:83824392..83824434,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10371 | |EntrezGene=10371 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10723 | |HGNC=10723 | ||
|TSSclassifier=strong | |||
|UniProt=Q14563 | |UniProt=Q14563 | ||
|association_with_transcript=-175bp_to_ENST00000265362,NM_006080,uc003uhz.2_5end | |association_with_transcript=-175bp_to_ENST00000265362,NM_006080,uc003uhz.2_5end | ||
|cluster_id=chr7:83824392..83824434,- | |||
|coexpression_cluster_id=C1284 | |coexpression_cluster_id=C1284 | ||
|description=CAGE_peak_3_at_SEMA3A_5end | |description=CAGE_peak_3_at_SEMA3A_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.08e-14!180;CL:0000057!3.56e-08!75;CL:0000393!1.98e-07!60;CL:0000211!1.98e-07!60;CL:0002620!2.15e-07!23;CL:0002319!6.73e-07!25 | |ontology_enrichment_celltype=CL:0000055!2.08e-14!180;CL:0000057!3.56e-08!75;CL:0000393!1.98e-07!60;CL:0000211!1.98e-07!60;CL:0002620!2.15e-07!23;CL:0002319!6.73e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.82e-08;23!CL:0002319;4.95e-07;25 | |ontology_enrichment_celltype_v019=CL:0002620;8.82e-08;23!CL:0002319;4.95e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.99e-08,23;CL:0002319,6.74e-07,25 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.07e-16!347;UBERON:0000475!3.36e-15!365;UBERON:0000468!3.68e-12!659;UBERON:0000467!5.53e-12!625;UBERON:0000480!8.89e-12!626;UBERON:0001007!1.39e-09!155;UBERON:0001555!1.39e-09!155;UBERON:0007026!1.39e-09!155;UBERON:0000922!1.89e-09!612;UBERON:0004119!7.49e-09!169;UBERON:0000925!7.49e-09!169;UBERON:0006595!7.49e-09!169;UBERON:0000062!9.33e-09!511;UBERON:0003102!1.29e-08!95;UBERON:0000160!1.33e-08!27;UBERON:0002050!1.75e-08!605;UBERON:0005423!1.75e-08!605;UBERON:0000923!2.83e-08!604;UBERON:0005291!2.83e-08!604;UBERON:0006598!2.83e-08!604;UBERON:0002532!2.83e-08!604;UBERON:0000064!3.17e-08!219;UBERON:0005409!3.91e-08!35;UBERON:0000119!4.52e-08!312;UBERON:0000483!7.14e-08!309;UBERON:0000477!3.11e-07!286;UBERON:0000033!3.44e-07!123 | |ontology_enrichment_uberon=UBERON:0000481!2.07e-16!347;UBERON:0000475!3.36e-15!365;UBERON:0000468!3.68e-12!659;UBERON:0000467!5.53e-12!625;UBERON:0000480!8.89e-12!626;UBERON:0001007!1.39e-09!155;UBERON:0001555!1.39e-09!155;UBERON:0007026!1.39e-09!155;UBERON:0000922!1.89e-09!612;UBERON:0004119!7.49e-09!169;UBERON:0000925!7.49e-09!169;UBERON:0006595!7.49e-09!169;UBERON:0000062!9.33e-09!511;UBERON:0003102!1.29e-08!95;UBERON:0000160!1.33e-08!27;UBERON:0002050!1.75e-08!605;UBERON:0005423!1.75e-08!605;UBERON:0000923!2.83e-08!604;UBERON:0005291!2.83e-08!604;UBERON:0006598!2.83e-08!604;UBERON:0002532!2.83e-08!604;UBERON:0000064!3.17e-08!219;UBERON:0005409!3.91e-08!35;UBERON:0000119!4.52e-08!312;UBERON:0000483!7.14e-08!309;UBERON:0000477!3.11e-07!286;UBERON:0000033!3.44e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;8.44e-08;17!UBERON:0005409;7.10e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000160;8.44e-08;17!UBERON:0005409;7.10e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.98e-08,145;UBERON:0001555,1.98e-08,145;UBERON:0007026,1.98e-08,145;UBERON:0011216,2.27e-08,223;UBERON:0000160,8.23e-08,17;UBERON:0003102,2.33e-07,99;UBERON:0004119,4.34e-07,160;UBERON:0000925,4.34e-07,160;UBERON:0006595,4.34e-07,160 | |||
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| ||
|short_description=p3@SEMA3A | |short_description=p3@SEMA3A | ||
}} | }} |
Latest revision as of 19:41, 19 September 2015
Short description: | p3@SEMA3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SEMA3A_5end |
Coexpression cluster: | C1284_mucinous_ductal_small_endometrial_adrenal_extraskeletal_large |
Association with transcript: | -175bp_to_ENST00000265362, NM_006080, uc003uhz.2_5end |
EntrezGene: | SEMA3A |
HGNC: | 10723 |
UniProt: | Q14563 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.99e-08 | 23 |
neural cell | 6.74e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
digestive system | 1.98e-08 | 145 |
digestive tract | 1.98e-08 | 145 |
primitive gut | 1.98e-08 | 145 |
organ system subdivision | 2.27e-08 | 223 |
intestine | 8.23e-08 | 17 |
surface structure | 2.33e-07 | 99 |
endoderm-derived structure | 4.34e-07 | 160 |
endoderm | 4.34e-07 | 160 |
presumptive endoderm | 4.34e-07 | 160 |