FFCP PHASE1:Hg19::chr3:119276587..119276606,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=941 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1700 | |||
|TSSclassifier=strong | |||
|UniProt=Q5DTA9,Q5DTB0 | |||
|association_with_transcript=-12bp_to_ENST00000383668,ENST00000383669_5end | |||
|cluster_id=chr3:119276587..119276606,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_6_at_CD80_5end | |||
|id=chr3:119276587..119276606,- | |||
|ontology_enrichment_celltype=CL:0000945!3.86e-46!24;CL:0000826!3.86e-46!24;CL:0000838!6.84e-27!52;CL:0000542!2.49e-26!53;CL:0000051!2.49e-26!53;CL:0000988!6.98e-16!182;CL:0000738!9.03e-16!140;CL:0000785!6.82e-15!2;CL:0000955!6.82e-15!2;CL:0000818!6.82e-15!2;CL:0000954!6.82e-15!2;CL:0000816!6.82e-15!2;CL:0000453!1.15e-13!5;CL:0002087!3.32e-13!119;CL:0000990!7.87e-13!8;CL:0002032!8.24e-13!165;CL:0000837!8.24e-13!165;CL:0002031!1.52e-12!124;CL:0000236!3.30e-12!14;CL:0000037!3.90e-12!172;CL:0000566!3.90e-12!172;CL:0000080!1.46e-11!6;CL:0000451!1.60e-10!10;CL:0000817!3.12e-10!3;CL:0000946!1.41e-08!1;CL:0000786!1.41e-08!1;CL:0000980!1.41e-08!1;CL:0000819!5.07e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000453;2.71e-36;5!CL:0000946;6.31e-21;1!CL:0000786;6.31e-21;1!CL:0000990;1.57e-20;8!CL:0000451;6.19e-17;10!CL:0000945;5.23e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.55e-36,5;CL:0000946,4.22e-21,1;CL:0000786,4.22e-21,1;CL:0000980,4.22e-21,1;CL:0000990,1.52e-20,8;CL:0000451,6.02e-17,10;CL:0000785,3.02e-11,2;CL:0000955,3.02e-11,2;CL:0000818,3.02e-11,2;CL:0000954,3.02e-11,2;CL:0000816,3.02e-11,2;CL:0000988,1.34e-08,177;CL:0000945,5.36e-08,24;CL:0000826,5.36e-08,24;CL:0000817,6.34e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000954;3.70e-11;2 | |||
|ontology_enrichment_disease=DOID:0060058!4.01e-24!10;DOID:630!2.33e-08!1;DOID:0050177!2.33e-08!1;DOID:0050427!2.33e-08!1;DOID:0060060!3.33e-08!1;DOID:0060061!3.33e-08!1;DOID:8691!3.33e-08!1;DOID:0060073!5.07e-08!1;DOID:8675!5.07e-08!1;DOID:2355!7.16e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.16e-15!7;UBERON:0002106!3.93e-10!3;UBERON:0004854!3.93e-10!3;UBERON:0009034!3.93e-10!3;UBERON:0002095!3.93e-10!3;UBERON:0004782!3.93e-10!3;UBERON:0003281!3.93e-10!3;UBERON:0009664!3.93e-10!3;UBERON:0002296!3.93e-10!3;UBERON:0005602!3.93e-10!3;UBERON:0001179!3.93e-10!3;UBERON:0006293!3.93e-10!3;UBERON:0002171!3.10e-08!1;UBERON:0006518!3.10e-08!1;UBERON:0008949!3.10e-08!1;UBERON:0000101!3.10e-08!1;UBERON:0002167!3.10e-08!1;UBERON:0002370!1.42e-07!4;UBERON:0005058!1.42e-07!4;UBERON:0009113!1.42e-07!4;UBERON:0003295!1.42e-07!4;UBERON:0005562!1.42e-07!4;UBERON:0002331!4.11e-07!10;UBERON:0000358!4.11e-07!10;UBERON:0000307!4.11e-07!10;UBERON:0000091!4.11e-07!10;UBERON:0000087!4.11e-07!10;UBERON:0007806!4.11e-07!10;UBERON:0008780!4.11e-07!10;UBERON:0005728!4.11e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.04e-18;10!UBERON:0000178;1.04e-12;15!UBERON:0000179;1.04e-12;15!UBERON:0000463;1.04e-12;15!UBERON:0002390;3.81e-10;32!UBERON:0000478;3.58e-08;24!UBERON:0002106;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.01e-18,10;UBERON:0000358,1.01e-18,10;UBERON:0000307,1.01e-18,10;UBERON:0000091,1.01e-18,10;UBERON:0000087,1.01e-18,10;UBERON:0007010,1.01e-18,10;UBERON:0007806,1.01e-18,10;UBERON:0008780,1.01e-18,10;UBERON:0005728,1.01e-18,10;UBERON:0000178,1.02e-12,15;UBERON:0000179,1.02e-12,15;UBERON:0000463,1.02e-12,15;UBERON:0000478,3.54e-08,24;UBERON:0002106,7.26e-08,3;UBERON:0004854,7.26e-08,3;UBERON:0009034,7.26e-08,3;UBERON:0002095,7.26e-08,3;UBERON:0004782,7.26e-08,3;UBERON:0003281,7.26e-08,3;UBERON:0009664,7.26e-08,3;UBERON:0002296,7.26e-08,3;UBERON:0005602,7.26e-08,3;UBERON:0001179,7.26e-08,3;UBERON:0006293,7.26e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,0.821005894499457,0.629686250509434,0,0,0,0,0,0,0,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10776324914963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59911273173804,3.45979029050208,4.07245603071276,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26122833866349,1.72724292407372,3.43487327937273,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84374380089247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,1.59905849479886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p6@CD80 | |||
}} |
Latest revision as of 20:10, 19 September 2015
Short description: | p6@CD80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CD80_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -12bp_to_ENST00000383668, ENST00000383669_5end |
EntrezGene: | CD80 |
HGNC: | 1700 |
UniProt: | Q5DTA9Q5DTB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.55e-36 | 5 |
antibody secreting cell | 4.22e-21 | 1 |
plasma cell | 4.22e-21 | 1 |
plasmablast | 4.22e-21 | 1 |
conventional dendritic cell | 1.52e-20 | 8 |
dendritic cell | 6.02e-17 | 10 |
mature B cell | 3.02e-11 | 2 |
pre-B-II cell | 3.02e-11 | 2 |
transitional stage B cell | 3.02e-11 | 2 |
small pre-B-II cell | 3.02e-11 | 2 |
immature B cell | 3.02e-11 | 2 |
hematopoietic cell | 1.34e-08 | 177 |
lymphocyte of B lineage | 5.36e-08 | 24 |
pro-B cell | 5.36e-08 | 24 |
precursor B cell | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.01e-18 | 10 |
blastocyst | 1.01e-18 | 10 |
blastula | 1.01e-18 | 10 |
bilaminar disc | 1.01e-18 | 10 |
inner cell mass | 1.01e-18 | 10 |
cleaving embryo | 1.01e-18 | 10 |
connecting stalk | 1.01e-18 | 10 |
inner cell mass derived epiblast | 1.01e-18 | 10 |
extraembryonic mesoderm | 1.01e-18 | 10 |
blood | 1.02e-12 | 15 |
haemolymphatic fluid | 1.02e-12 | 15 |
organism substance | 1.02e-12 | 15 |
extraembryonic structure | 3.54e-08 | 24 |
spleen | 7.26e-08 | 3 |
gastrointestinal system mesentery | 7.26e-08 | 3 |
stomach region | 7.26e-08 | 3 |
mesentery | 7.26e-08 | 3 |
gastrointestinal system serosa | 7.26e-08 | 3 |
mesentery of stomach | 7.26e-08 | 3 |
gut mesentery | 7.26e-08 | 3 |
dorsal mesentery | 7.26e-08 | 3 |
dorsal mesogastrium | 7.26e-08 | 3 |
peritoneal cavity | 7.26e-08 | 3 |
spleen primordium | 7.26e-08 | 3 |