FFCP PHASE1:Hg19::chr1:202431911..202431922,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4660 | |EntrezGene=4660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7619 | |HGNC=7619 | ||
|TSSclassifier=strong | |||
|UniProt=O60237 | |UniProt=O60237 | ||
|association_with_transcript=40bp_to_ENST00000290419,ENST00000367270,ENST00000391959,ENST00000491336,NM_032103,NM_032104,uc001gyb.1,uc001gyc.1_5end | |association_with_transcript=40bp_to_ENST00000290419,ENST00000367270,ENST00000391959,ENST00000491336,NM_032103,NM_032104,uc001gyb.1,uc001gyc.1_5end | ||
|cluster_id=chr1:202431911..202431922,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_12_at_PPP1R12B_5end | |description=CAGE_peak_12_at_PPP1R12B_5end | ||
|id=chr1:202431911..202431922,+ | |id=chr1:202431911..202431922,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.39e-66;1 | |||
|ontology_enrichment_disease=DOID:114!9.38e-99!2;DOID:178!3.99e-50!1;DOID:326!3.99e-50!1;DOID:3978!3.99e-50!1;DOID:3394!3.99e-50!1;DOID:5844!3.99e-50!1;DOID:1287!4.00e-50!4 | |ontology_enrichment_disease=DOID:114!9.38e-99!2;DOID:178!3.99e-50!1;DOID:326!3.99e-50!1;DOID:3978!3.99e-50!1;DOID:3394!3.99e-50!1;DOID:5844!3.99e-50!1;DOID:1287!4.00e-50!4 | ||
|ontology_enrichment_disease_v019=DOID:114;8.99e-131;2!DOID:1287;3.35e-66;4!DOID:178;4.66e-66;1!DOID:326;4.66e-66;1!DOID:3978;4.66e-66;1!DOID:3394;4.66e-66;1!DOID:5844;4.66e-66;1!DOID:7;2.51e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.99e-131,2;DOID:1287,3.35e-66,4;DOID:178,4.66e-66,1;DOID:326,4.66e-66,1;DOID:3978,4.66e-66,1;DOID:3394,4.66e-66,1;DOID:5844,4.66e-66,1;DOID:7,6.83e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002084!2.42e-50!1;UBERON:0002082!2.42e-50!1;UBERON:0004706!2.42e-50!1;UBERON:0007029!6.58e-50!1;UBERON:0004151!8.00e-18!3;UBERON:0002300!8.00e-18!3;UBERON:0007100!2.09e-17!27;UBERON:0000014!1.29e-13!4;UBERON:0003103!2.34e-07!69 | |ontology_enrichment_uberon=UBERON:0002084!2.42e-50!1;UBERON:0002082!2.42e-50!1;UBERON:0004706!2.42e-50!1;UBERON:0007029!6.58e-50!1;UBERON:0004151!8.00e-18!3;UBERON:0002300!8.00e-18!3;UBERON:0007100!2.09e-17!27;UBERON:0000014!1.29e-13!4;UBERON:0003103!2.34e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;2.39e-66;1!UBERON:0002082;2.39e-66;1!UBERON:0007100;1.10e-24;25!UBERON:0004151;3.27e-23;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.39e-66,1;UBERON:0002082,2.39e-66,1;UBERON:0010226,2.39e-66,1;UBERON:0004151,3.27e-23,3;UBERON:0007100,5.98e-23,27;UBERON:0003103,8.58e-10,68 | |||
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|short_description=p12@PPP1R12B | |short_description=p12@PPP1R12B | ||
}} | }} |
Latest revision as of 20:33, 19 September 2015
Short description: | p12@PPP1R12B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PPP1R12B_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 40bp_to_ENST00000290419, ENST00000367270, ENST00000391959, ENST00000491336, NM_032103, NM_032104, uc001gyb.1, uc001gyc.1_5end |
EntrezGene: | PPP1R12B |
HGNC: | 7619 |
UniProt: | O60237 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 2.39e-66 | 1 |
cardiac ventricle | 2.39e-66 | 1 |
future cardiac ventricle | 2.39e-66 | 1 |
cardiac chamber | 3.27e-23 | 3 |
primary circulatory organ | 5.98e-23 | 27 |
compound organ | 8.58e-10 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.99e-131 | 2 |
cardiovascular system disease | 3.35e-66 | 4 |
vascular disease | 4.66e-66 | 1 |
ischemia | 4.66e-66 | 1 |
extrinsic cardiomyopathy | 4.66e-66 | 1 |
myocardial ischemia | 4.66e-66 | 1 |
myocardial infarction | 4.66e-66 | 1 |
disease of anatomical entity | 6.83e-08 | 39 |