FFCP PHASE1:Hg19::chr1:9299914..9299919,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9563 | |EntrezGene=9563 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4795 | |HGNC=4795 | ||
|TSSclassifier=strong | |||
|UniProt=O95479 | |UniProt=O95479 | ||
|association_with_transcript=11bp_to_CR749282_5end | |association_with_transcript=11bp_to_CR749282_5end | ||
|cluster_id=chr1:9299914..9299919,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_13_at_H6PD_5end | |description=CAGE_peak_13_at_H6PD_5end | ||
|id=chr1:9299914..9299919,+ | |id=chr1:9299914..9299919,+ | ||
|ontology_enrichment_celltype=CL:0000990!3.85e-09!8;CL:0000451!2.60e-07!10;CL:0000594!4.95e-07!3;CL:0000840!9.68e-07!5;CL:0001029!9.68e-07!5 | |ontology_enrichment_celltype=CL:0000990!3.85e-09!8;CL:0000451!2.60e-07!10;CL:0000594!4.95e-07!3;CL:0000840!9.68e-07!5;CL:0001029!9.68e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.35e-14;12!CL:0000840;5.76e-13;5!CL:0002363;3.13e-10;2!CL:0000990;5.87e-09;8!CL:0000451;1.72e-07;10!CL:0000632;2.05e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.40e-14,12;CL:0000840,5.76e-13,5;CL:0001029,5.76e-13,5;CL:0002363,3.58e-10,2;CL:0000008,3.58e-10,2;CL:0000990,5.87e-09,8;CL:0000451,1.73e-07,10;CL:0000632,2.05e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000008;3.13e-10;2!UBERON:0004161;1.56e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!1.39e-13!26;UBERON:0002107!1.55e-12!19;UBERON:0006925!1.55e-12!19;UBERON:0008836!1.55e-12!19;UBERON:0008835!1.84e-10!22;UBERON:0003894!1.84e-10!22;UBERON:0009854!6.84e-10!23;UBERON:0002365!1.06e-09!31;UBERON:0002330!1.06e-09!31;UBERON:0007499!6.83e-09!25;UBERON:0009497!6.83e-09!25;UBERON:0000015!6.83e-09!25;UBERON:0002423!6.83e-09!25;UBERON:0006235!6.83e-09!25;UBERON:0004161!6.83e-09!25;UBERON:0009856!1.88e-08!26;UBERON:0002530!9.66e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.11e-34;19!UBERON:0006925;3.11e-34;19!UBERON:0002423;4.96e-26;25!UBERON:0002365;4.70e-21;31!UBERON:0002330;4.70e-21;31!UBERON:0002368;5.83e-18;33!UBERON:0000949;1.23e-12;43!UBERON:0003566;3.13e-10;2!UBERON:0001777;3.13e-10;2!UBERON:0005172;4.19e-09;52!UBERON:0005173;4.19e-09;52!UBERON:0002530;1.27e-07;57!UBERON:0001896;3.06e-07;3!UBERON:0005290;3.06e-07;3!UBERON:0001007;4.19e-07;81!UBERON:0002417;9.09e-07;58!UBERON:0000916;9.09e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.02e-34,19;UBERON:0006925,3.02e-34,19;UBERON:0008836,3.02e-34,19;UBERON:0008835,1.38e-29,22;UBERON:0003894,1.38e-29,22;UBERON:0009854,2.66e-28,23;UBERON:0007499,4.86e-26,25;UBERON:0009497,4.86e-26,25;UBERON:0000015,4.86e-26,25;UBERON:0002423,4.86e-26,25;UBERON:0006235,4.86e-26,25;UBERON:0004161,4.86e-26,25;UBERON:0009856,4.86e-25,26;UBERON:0002365,5.32e-21,31;UBERON:0002330,5.32e-21,31;UBERON:0002368,1.35e-18,35;UBERON:0000949,1.90e-14,45;UBERON:0003929,5.08e-12,54;UBERON:0005172,5.08e-12,54;UBERON:0005173,5.08e-12,54;UBERON:0002530,5.46e-11,59;UBERON:0002417,8.37e-11,60;UBERON:0000916,8.37e-11,60;UBERON:0003566,3.58e-10,2;UBERON:0001777,3.58e-10,2;UBERON:0005911,7.46e-08,82;UBERON:0001041,2.17e-07,87;UBERON:0001896,3.16e-07,3;UBERON:0005290,3.16e-07,3;UBERON:0010096,3.16e-07,3 | |||
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| ||
|short_description=p13@H6PD | |short_description=p13@H6PD | ||
}} | }} |
Latest revision as of 20:40, 19 September 2015
Short description: | p13@H6PD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_H6PD_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 11bp_to_CR749282_5end |
EntrezGene: | H6PD |
HGNC: | 4795 |
UniProt: | O95479 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.40e-14 | 12 |
immature conventional dendritic cell | 5.76e-13 | 5 |
common dendritic progenitor | 5.76e-13 | 5 |
keratocyte | 3.58e-10 | 2 |
migratory cranial neural crest cell | 3.58e-10 | 2 |
conventional dendritic cell | 5.87e-09 | 8 |
dendritic cell | 1.73e-07 | 10 |
hepatic stellate cell | 2.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 3.02e-34 | 19 |
digestive gland | 3.02e-34 | 19 |
liver bud | 3.02e-34 | 19 |
hepatic diverticulum | 1.38e-29 | 22 |
liver primordium | 1.38e-29 | 22 |
digestive tract diverticulum | 2.66e-28 | 23 |
epithelial sac | 4.86e-26 | 25 |
epithelium of foregut-midgut junction | 4.86e-26 | 25 |
anatomical boundary | 4.86e-26 | 25 |
hepatobiliary system | 4.86e-26 | 25 |
foregut-midgut junction | 4.86e-26 | 25 |
septum transversum | 4.86e-26 | 25 |
sac | 4.86e-25 | 26 |
exocrine gland | 5.32e-21 | 31 |
exocrine system | 5.32e-21 | 31 |
endocrine gland | 1.35e-18 | 35 |
endocrine system | 1.90e-14 | 45 |
gut epithelium | 5.08e-12 | 54 |
abdomen element | 5.08e-12 | 54 |
abdominal segment element | 5.08e-12 | 54 |
gland | 5.46e-11 | 59 |
abdominal segment of trunk | 8.37e-11 | 60 |
abdomen | 8.37e-11 | 60 |
head connective tissue | 3.58e-10 | 2 |
substantia propria of cornea | 3.58e-10 | 2 |
endo-epithelium | 7.46e-08 | 82 |
foregut | 2.17e-07 | 87 |
medulla oblongata | 3.16e-07 | 3 |
myelencephalon | 3.16e-07 | 3 |
future myelencephalon | 3.16e-07 | 3 |