FFCP PHASE1:Hg19::chr12:6484243..6484261,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6337 | |EntrezGene=6337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10599 | |HGNC=10599 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=117bp_to_ENST00000542436_5end | |association_with_transcript=117bp_to_ENST00000542436_5end | ||
|cluster_id=chr12:6484243..6484261,- | |||
|coexpression_cluster_id=C3316 | |coexpression_cluster_id=C3316 | ||
|description=CAGE_peak_10_at_SCNN1A_5end | |description=CAGE_peak_10_at_SCNN1A_5end | ||
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|ontology_enrichment_celltype=CL:0000066!3.55e-16!254;CL:0000223!9.64e-09!59;CL:0002076!2.20e-07!43 | |ontology_enrichment_celltype=CL:0000066!3.55e-16!254;CL:0000223!9.64e-09!59;CL:0002076!2.20e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000083;2.28e-11;4!CL:0002536;5.01e-11;2!CL:0000123;3.59e-10;2!CL:0000242;3.59e-10;2!CL:0002577;4.00e-07;3!CL:0002178;7.57e-07;3 | |ontology_enrichment_celltype_v019=CL:0000083;2.28e-11;4!CL:0002536;5.01e-11;2!CL:0000123;3.59e-10;2!CL:0000242;3.59e-10;2!CL:0002577;4.00e-07;3!CL:0002178;7.57e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.53e-11,4;CL:0002536,5.54e-11,2;CL:0000242,4.86e-10,2;CL:0000066,5.01e-08,253;CL:0002577,4.26e-07,3;CL:0002178,5.44e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!6.87e-17!106;DOID:0050687!2.50e-12!143 | |ontology_enrichment_disease=DOID:305!6.87e-17!106;DOID:0050687!2.50e-12!143 | ||
|ontology_enrichment_disease_v019=DOID:1793;2.28e-11;4!DOID:4929;9.38e-11;2!DOID:4074;2.36e-10;2!DOID:4905;2.36e-10;2!DOID:3498;2.36e-10;2!DOID:3493;7.31e-10;2!DOID:299;2.85e-08;25!DOID:3119;5.62e-08;14!DOID:170;1.02e-07;6 | |ontology_enrichment_disease_v019=DOID:1793;2.28e-11;4!DOID:4929;9.38e-11;2!DOID:4074;2.36e-10;2!DOID:4905;2.36e-10;2!DOID:3498;2.36e-10;2!DOID:3493;7.31e-10;2!DOID:299;2.85e-08;25!DOID:3119;5.62e-08;14!DOID:170;1.02e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:1793,1.53e-11,4;DOID:4929,8.97e-11,2;DOID:4074,1.31e-10,2;DOID:4905,1.31e-10,2;DOID:3498,1.31e-10,2;DOID:3493,4.86e-10,2;DOID:305,5.15e-10,106;DOID:0050687,2.01e-09,143;DOID:299,2.19e-08,25;DOID:3119,4.20e-08,14;DOID:170,7.85e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.16e-20!169;UBERON:0000925!5.16e-20!169;UBERON:0006595!5.16e-20!169;UBERON:0004921!4.72e-19!129;UBERON:0004185!4.72e-19!129;UBERON:0000466!5.33e-19!126;UBERON:0000077!1.81e-18!130;UBERON:0000464!1.60e-17!104;UBERON:0001007!1.11e-16!155;UBERON:0001555!1.11e-16!155;UBERON:0007026!1.11e-16!155;UBERON:0005177!2.20e-15!107;UBERON:0001041!4.71e-15!98;UBERON:0005153!6.30e-12!37;UBERON:0006554!2.06e-11!44;UBERON:0005911!2.57e-11!82;UBERON:0001008!5.10e-11!45;UBERON:0000058!7.19e-11!26;UBERON:0000065!1.77e-10!53;UBERON:0003104!2.09e-10!238;UBERON:0009142!2.09e-10!238;UBERON:0001048!8.62e-10!168;UBERON:0005178!1.71e-09!34;UBERON:0002224!1.71e-09!34;UBERON:0002553!2.29e-09!70;UBERON:0001004!2.30e-09!72;UBERON:0005181!4.35e-09!35;UBERON:0008947!6.96e-09!38;UBERON:0003258!6.96e-09!38;UBERON:0009569!8.73e-09!113;UBERON:0000062!1.47e-08!511;UBERON:0002048!3.28e-08!22;UBERON:0000117!3.28e-08!22;UBERON:0000171!3.28e-08!22;UBERON:0000170!3.28e-08!22;UBERON:0005597!3.28e-08!22;UBERON:0000118!3.28e-08!22;UBERON:0000489!4.82e-08!32;UBERON:0005157!6.60e-08!51;UBERON:0000481!8.86e-08!347;UBERON:0000922!1.05e-07!612;UBERON:0002113!1.17e-07!27;UBERON:0003918!1.17e-07!27;UBERON:0005095!1.17e-07!27;UBERON:0007687!1.17e-07!27;UBERON:0000072!2.09e-07!46;UBERON:0003886!2.43e-07!63;UBERON:0005156!2.62e-07!59;UBERON:0000990!2.62e-07!59;UBERON:0003064!3.98e-07!37;UBERON:0003101!5.10e-07!22;UBERON:0000079!5.10e-07!22 | |ontology_enrichment_uberon=UBERON:0004119!5.16e-20!169;UBERON:0000925!5.16e-20!169;UBERON:0006595!5.16e-20!169;UBERON:0004921!4.72e-19!129;UBERON:0004185!4.72e-19!129;UBERON:0000466!5.33e-19!126;UBERON:0000077!1.81e-18!130;UBERON:0000464!1.60e-17!104;UBERON:0001007!1.11e-16!155;UBERON:0001555!1.11e-16!155;UBERON:0007026!1.11e-16!155;UBERON:0005177!2.20e-15!107;UBERON:0001041!4.71e-15!98;UBERON:0005153!6.30e-12!37;UBERON:0006554!2.06e-11!44;UBERON:0005911!2.57e-11!82;UBERON:0001008!5.10e-11!45;UBERON:0000058!7.19e-11!26;UBERON:0000065!1.77e-10!53;UBERON:0003104!2.09e-10!238;UBERON:0009142!2.09e-10!238;UBERON:0001048!8.62e-10!168;UBERON:0005178!1.71e-09!34;UBERON:0002224!1.71e-09!34;UBERON:0002553!2.29e-09!70;UBERON:0001004!2.30e-09!72;UBERON:0005181!4.35e-09!35;UBERON:0008947!6.96e-09!38;UBERON:0003258!6.96e-09!38;UBERON:0009569!8.73e-09!113;UBERON:0000062!1.47e-08!511;UBERON:0002048!3.28e-08!22;UBERON:0000117!3.28e-08!22;UBERON:0000171!3.28e-08!22;UBERON:0000170!3.28e-08!22;UBERON:0005597!3.28e-08!22;UBERON:0000118!3.28e-08!22;UBERON:0000489!4.82e-08!32;UBERON:0005157!6.60e-08!51;UBERON:0000481!8.86e-08!347;UBERON:0000922!1.05e-07!612;UBERON:0002113!1.17e-07!27;UBERON:0003918!1.17e-07!27;UBERON:0005095!1.17e-07!27;UBERON:0007687!1.17e-07!27;UBERON:0000072!2.09e-07!46;UBERON:0003886!2.43e-07!63;UBERON:0005156!2.62e-07!59;UBERON:0000990!2.62e-07!59;UBERON:0003064!3.98e-07!37;UBERON:0003101!5.10e-07!22;UBERON:0000079!5.10e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.47e-08;5!UBERON:0010039;1.47e-08;5!UBERON:0001041;7.73e-08;14!UBERON:0001264;1.14e-07;10!UBERON:0006947;1.30e-07;3!UBERON:0004054;1.30e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000945;1.47e-08;5!UBERON:0010039;1.47e-08;5!UBERON:0001041;7.73e-08;14!UBERON:0001264;1.14e-07;10!UBERON:0006947;1.30e-07;3!UBERON:0004054;1.30e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.01e-07,10;UBERON:0006947,1.18e-07,3;UBERON:0004054,1.18e-07,3 | |||
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|short_description=p10@SCNN1A | |short_description=p10@SCNN1A | ||
}} | }} |
Latest revision as of 20:40, 19 September 2015
Short description: | p10@SCNN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SCNN1A_5end |
Coexpression cluster: | C3316_Amniotic_seminal_ductal_ductus_lung_tubular_Placental |
Association with transcript: | 117bp_to_ENST00000542436_5end |
EntrezGene: | SCNN1A |
HGNC: | 10599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.53e-11 | 4 |
amniotic epithelial cell | 5.54e-11 | 2 |
Merkel cell | 4.86e-10 | 2 |
epithelial cell | 5.01e-08 | 253 |
placental epithelial cell | 4.26e-07 | 3 |
epithelial cell of stomach | 5.44e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pancreas | 1.01e-07 | 10 |
male genital duct | 1.18e-07 | 3 |
internal male genitalia | 1.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pancreatic cancer | 1.53e-11 | 4 |
tubular adenocarcinoma | 8.97e-11 | 2 |
pancreas adenocarcinoma | 1.31e-10 | 2 |
pancreatic carcinoma | 1.31e-10 | 2 |
pancreatic ductal adenocarcinoma | 1.31e-10 | 2 |
signet ring cell adenocarcinoma | 4.86e-10 | 2 |
carcinoma | 5.15e-10 | 106 |
cell type cancer | 2.01e-09 | 143 |
adenocarcinoma | 2.19e-08 | 25 |
gastrointestinal system cancer | 4.20e-08 | 14 |
endocrine gland cancer | 7.85e-08 | 6 |