FFCP PHASE1:Hg19::chr1:93913627..93913659,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:93913627..93913659,+
|short_description=p2@FNBP1L
|description=CAGE_peak_2_at_FNBP1L_5end
|association_with_transcript=0bp_to_ENST00000370256_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54874 | |EntrezGene=54874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20851 | |HGNC=20851 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000370256_5end | |||
|cluster_id=chr1:93913627..93913659,+ | |||
|coexpression_cluster_id=C2604 | |||
|description=CAGE_peak_2_at_FNBP1L_5end | |||
|id=chr1:93913627..93913659,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.39e-11!143;DOID:3095!1.56e-10!22;DOID:2994!1.56e-10!22;DOID:305!4.23e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;6.54e-11;22!DOID:2994;6.54e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.81e-11,143;DOID:3095,1.11e-10,22;DOID:2994,1.11e-10,22;DOID:305,5.10e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.03e-19!94;UBERON:0001016!1.03e-19!94;UBERON:0001017!5.37e-19!82;UBERON:0007023!1.06e-18!115;UBERON:0005743!2.94e-18!86;UBERON:0000924!2.62e-16!173;UBERON:0006601!2.62e-16!173;UBERON:0002346!1.93e-15!90;UBERON:0004121!3.70e-15!169;UBERON:0001049!6.86e-15!57;UBERON:0005068!6.86e-15!57;UBERON:0006241!6.86e-15!57;UBERON:0007135!6.86e-15!57;UBERON:0003075!3.51e-14!86;UBERON:0007284!3.51e-14!86;UBERON:0000955!4.11e-14!69;UBERON:0006238!4.11e-14!69;UBERON:0002616!1.67e-13!59;UBERON:0003080!1.16e-11!42;UBERON:0000468!1.45e-11!659;UBERON:0002780!3.18e-11!41;UBERON:0001890!3.18e-11!41;UBERON:0006240!3.18e-11!41;UBERON:0000033!8.57e-11!123;UBERON:0000153!2.99e-10!129;UBERON:0007811!2.99e-10!129;UBERON:0002020!1.10e-09!34;UBERON:0003528!1.10e-09!34;UBERON:0003056!1.24e-09!61;UBERON:0002791!2.80e-09!33;UBERON:0001893!2.81e-09!34;UBERON:0001869!5.09e-09!32;UBERON:0000922!1.68e-08!612;UBERON:0000481!4.57e-08!347;UBERON:0004111!2.33e-07!241;UBERON:0000956!3.85e-07!25;UBERON:0000203!3.85e-07!25;UBERON:0000467!5.29e-07!625;UBERON:0000480!6.74e-07!626;UBERON:0000475!9.04e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.56e-10;49!UBERON:0002791;1.04e-08;32!UBERON:0002780;1.17e-08;41!UBERON:0001890;1.17e-08;41!UBERON:0001869;2.51e-08;32!UBERON:0003528;2.56e-08;34!UBERON:0002020;2.56e-08;34!UBERON:0000073;3.71e-08;53!UBERON:0002616;3.71e-08;53!UBERON:0001893;8.39e-08;34!UBERON:0001016;8.51e-08;83!UBERON:0001017;3.00e-07;75!UBERON:0000956;5.75e-07;25!UBERON:0000203;5.75e-07;25!UBERON:0000955;8.00e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.45e-20,89;UBERON:0001017,7.88e-19,81;UBERON:0007023,2.41e-18,114;UBERON:0011216,7.40e-18,223;UBERON:0004121,4.68e-16,171;UBERON:0000924,4.68e-16,171;UBERON:0006601,4.68e-16,171;UBERON:0002346,1.16e-14,86;UBERON:0001049,1.17e-14,56;UBERON:0005068,1.17e-14,56;UBERON:0006241,1.17e-14,56;UBERON:0007135,1.17e-14,56;UBERON:0000955,6.80e-14,68;UBERON:0006238,6.80e-14,68;UBERON:0003075,2.12e-13,82;UBERON:0007284,2.12e-13,82;UBERON:0000073,2.19e-13,53;UBERON:0002616,2.19e-13,53;UBERON:0002780,2.20e-11,41;UBERON:0001890,2.20e-11,41;UBERON:0003080,2.20e-11,41;UBERON:0006240,2.20e-11,41;UBERON:0010371,2.89e-11,104;UBERON:0003528,8.11e-10,34;UBERON:0002020,8.11e-10,34;UBERON:0003056,1.71e-09,61;UBERON:0001893,2.09e-09,34;UBERON:0002791,2.59e-09,32;UBERON:0010314,3.47e-09,132;UBERON:0001869,3.83e-09,32;UBERON:0000956,3.11e-07,25;UBERON:0000203,3.11e-07,25;UBERON:0004111,6.53e-07,240 | |||
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| ||
|short_description=p2@FNBP1L | |||
}} | }} |
Latest revision as of 21:41, 19 September 2015
Short description: | p2@FNBP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FNBP1L_5end |
Coexpression cluster: | C2604_Mast_occipital_parietal_temporal_duodenum_Neural_hepatoblastoma |
Association with transcript: | 0bp_to_ENST00000370256_5end |
EntrezGene: | FNBP1L |
HGNC: | 20851 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 3.45e-20 | 89 |
central nervous system | 7.88e-19 | 81 |
adult organism | 2.41e-18 | 114 |
organ system subdivision | 7.40e-18 | 223 |
ectoderm-derived structure | 4.68e-16 | 171 |
ectoderm | 4.68e-16 | 171 |
presumptive ectoderm | 4.68e-16 | 171 |
neurectoderm | 1.16e-14 | 86 |
neural tube | 1.17e-14 | 56 |
neural rod | 1.17e-14 | 56 |
future spinal cord | 1.17e-14 | 56 |
neural keel | 1.17e-14 | 56 |
brain | 6.80e-14 | 68 |
future brain | 6.80e-14 | 68 |
neural plate | 2.12e-13 | 82 |
presumptive neural plate | 2.12e-13 | 82 |
regional part of nervous system | 2.19e-13 | 53 |
regional part of brain | 2.19e-13 | 53 |
regional part of forebrain | 2.20e-11 | 41 |
forebrain | 2.20e-11 | 41 |
anterior neural tube | 2.20e-11 | 41 |
future forebrain | 2.20e-11 | 41 |
ecto-epithelium | 2.89e-11 | 104 |
brain grey matter | 8.11e-10 | 34 |
gray matter | 8.11e-10 | 34 |
pre-chordal neural plate | 1.71e-09 | 61 |
telencephalon | 2.09e-09 | 34 |
regional part of telencephalon | 2.59e-09 | 32 |
structure with developmental contribution from neural crest | 3.47e-09 | 132 |
cerebral hemisphere | 3.83e-09 | 32 |
cerebral cortex | 3.11e-07 | 25 |
pallium | 3.11e-07 | 25 |
anatomical conduit | 6.53e-07 | 240 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.81e-11 | 143 |
germ cell and embryonal cancer | 1.11e-10 | 22 |
germ cell cancer | 1.11e-10 | 22 |
carcinoma | 5.10e-08 | 106 |