FFCP PHASE1:Hg19::chr17:38020392..38020477,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:38020392..38020477,-
|short_description=p1@IKZF3
|description=CAGE_peak_1_at_IKZF3_5end
|association_with_transcript=0bp_to_ENST00000293068,ENST0000034687...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22806 | |EntrezGene=22806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13178 | |HGNC=13178 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKT9 | |UniProt=Q9UKT9 | ||
|association_with_transcript=0bp_to_ENST00000293068,ENST00000346872,ENST00000348427,ENST00000377944,ENST00000377945,ENST00000377952,ENST00000377958,ENST00000394189,ENST00000488188,ENST00000535189,NM_012481,NM_183228,NM_183229,NM_183230,NM_183231,NM_183232,uc002hsu.2,uc002hsv.2,uc002hsw.2,uc002hsx.2,uc002hsy.2,uc002hsz.2,uc002hta.2,uc002htb.2,uc002htc.2,uc002htd.2,uc010cwd.2,uc010cwe.2,uc010cwf.2,uc010cwg.2,uc010cwh.2_5end | |||
|cluster_id=chr17:38020392..38020477,- | |||
|coexpression_cluster_id=C1325 | |||
|description=CAGE_peak_1_at_IKZF3_5end | |||
|id=chr17:38020392..38020477,- | |||
|ontology_enrichment_celltype=CL:0000738!5.47e-41!140;CL:0000542!5.72e-37!53;CL:0000051!5.72e-37!53;CL:0000838!4.06e-36!52;CL:0000037!2.13e-34!172;CL:0000566!2.13e-34!172;CL:0000988!2.58e-33!182;CL:0002087!6.50e-33!119;CL:0002031!1.59e-32!124;CL:0002032!1.49e-31!165;CL:0000837!1.49e-31!165;CL:0000945!4.43e-21!24;CL:0000826!4.43e-21!24;CL:0000084!5.21e-14!25;CL:0000827!5.21e-14!25;CL:0000791!1.56e-13!18;CL:0000789!1.56e-13!18;CL:0002420!1.56e-13!18;CL:0002419!1.56e-13!18;CL:0000790!1.56e-13!18;CL:0000236!5.01e-13!14;CL:0000625!2.52e-09!11;CL:0000766!4.08e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.24e-31;53!CL:0000945;3.24e-31;24!CL:0000084;3.25e-21;25!CL:0000791;1.05e-19;18!CL:0000789;1.05e-19;18!CL:0002419;1.05e-19;18!CL:0000236;9.09e-18;13!CL:0002087;3.95e-14;104!CL:0000625;2.65e-13;11!CL:0000738;8.48e-10;136!CL:0000988;7.01e-08;177!CL:0000624;2.50e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.15e-56,53;CL:0000051,3.15e-56,53;CL:0000838,6.30e-55,52;CL:0000738,2.92e-48,136;CL:0000988,5.65e-41,177;CL:0000037,2.11e-40,168;CL:0002031,5.39e-39,120;CL:0002087,6.49e-39,115;CL:0002032,3.21e-36,161;CL:0000837,3.21e-36,161;CL:0000945,3.48e-31,24;CL:0000826,3.48e-31,24;CL:0000084,3.79e-21,25;CL:0000827,3.79e-21,25;CL:0000791,1.03e-19,18;CL:0000789,1.03e-19,18;CL:0002420,1.03e-19,18;CL:0002419,1.03e-19,18;CL:0000790,1.03e-19,18;CL:0000236,6.09e-19,14;CL:0000625,2.50e-13,11;CL:0000624,2.57e-07,6;CL:0000134,5.69e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;1.24e-31;53!CL:0000790;1.05e-19;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.12e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.23e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.04e-13!102;UBERON:0003061!2.04e-13!102;UBERON:0002193!2.92e-12!112;UBERON:0000178!9.02e-12!15;UBERON:0000179!9.02e-12!15;UBERON:0000463!9.02e-12!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.32e-17;15!UBERON:0000179;4.32e-17;15!UBERON:0000463;4.32e-17;15!UBERON:0002390;5.97e-12;32!UBERON:0002193;6.08e-07;42!UBERON:0004177;7.47e-07;5!UBERON:0005057;7.47e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.91e-17,15;UBERON:0000179,4.91e-17,15;UBERON:0000463,4.91e-17,15;UBERON:0002390,7.24e-14,98;UBERON:0003061,7.24e-14,98;UBERON:0002193,5.24e-13,108;UBERON:0004177,1.58e-08,7;UBERON:0005057,1.58e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,68.3135847386684,72.4127198948522,73.8307128722311,9.8341069212226,23.0297638858328,9.75341576891279,0,0,0,24.2472337816344,52.7447852528334,0,6.64794490238253,11.4310335057981,11.0675544065084,0.447830948479849,3.2389366601898,1.80302897343931,0,1.51150377475524,0.485168122375632,0.232429036905685,1.6446715520873,0.309706370895104,0.575384784644301,2.30544635876191,0.709446689665756,0.689491361473237,2.5819387343353,0,0,1.09162460023138,1.57306439111559,1.22433556948361,2.24650318953266,1.91801137739712,0.659702600373432,0.598390972864896,0,1.45104619314292,2.8369261234557,0,0.502497330513487,2.60741459210101,0.217188844705117,3.63239701580021,3.31449872388808,0.632924774881769,0.211255286311942,0.212604299965044,0,0,0.150176892841506,0,0,0.19891667719909,0,82.7182348968217,66.62891057398,90.7299438940826,83.6391236230354,87.6867211608867,84.488608673309,76.681205243044,84.9107841536474,104.735186316139,78.6897833757058,106.271957418814,0,24.6623767711876,0.263384084775077,29.506465517075,33.7989255964282,20.9713528979499,6.01871383406441,3.91106719960308,4.73447805734733,1.94826728407911,14.9290012226133,3.24066498222321,3.98761010250518,5.95768500283034,22.5440722717188,23.4106825607781,12.6617186544831,5.25065033793112,14.2003512010176,10.8249191108304,17.1226129977416,8.36284190439814,10.4244595281761,14.1791582632711,12.3705880373747,16.9523193653067,14.3354436445844,16.9281698002669,14.2567806667256,19.2736152419549,25.4693356197293,26.2354525759926,14.680189626729,12.3169199538157,45.7647307120143,47.0694744578973,37.3646962017621,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,1.30979075497713,0,0,0.649094787309367,0.348259474598534,0.132957960518865,2.38490624305342,4.0039643754609,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,1.26755034821831,0,0,11.4780405847809,0.491953754172454,0,0,0,0,0.277765335475589,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,27.0964780842769,2.11316241631742,2.28060927094849,2.45003920808834,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,3.47463946379935,39.8002135607893,57.1413073377721,46.2034930607094,0,0,0,0,0,0.749007023947182,0,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,17.5752822204454,14.0214230532101,12.1669415895927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0.200506470303285,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,1.73981983154852,1.81520899825294,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.510450849978337,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54911749049875,0,0.286822704408103,0.0982490410131212,0,0,0.422215270595328,0,0,0,0,0,0,0.470719003883896,0.43050537267123,0,0,0.918893600827838,7.61171413848254,18.351292971417,8.54470780761244,14.0556747520096,20.1567513812235,16.8603060910106,10.2605973075242,12.6900028207083,0.213648142254946,0,0,52.9539049108298,6.05930694501068,3.34366663737546,1.27541018183058,0,0,0,0,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0.166849141711909,0,0,13.5396138842484,3.78637949866376,0.66614393599564,14.098700508785,12.9126972881672,0.293016358543788,0,0,0.284136146806413,0,0.593929361665277,0,0,0,0,0,0,1.59398390600856,24.312984566741,5.03865495708552,0,74.5893921094081,0,1.43789361835723,0,0,4.24166644238815,19.1586473877552,0,0,0,0,0,0,0,7.39657413855748,0.508507300585533,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0.41827123283581,0.307801034015188,0.113942055847001,0,0.448788222048861,0,0,0.0915975934018623,0.533034776018635,6.13159789174419,0,9.64027755020907,0,0.980312671588698,0.839107934879214,0.189753732724185,8.74151184392083,0.421996129056054,0.163232808159148,0.706765357169704,0,3.98104772431402,1.50377859655677,0.611030144933625,112.084986641275,93.2907739046097,92.5178472618335,0.134802265961354,0.802577647298789,0,29.5576758529379,1.76098157038881,0.242780379534093,1.57833761139756,3.62972148145992,0,1.32691817219825,11.7252267143304,0.72581733978073,0,0,0,0,0.569219092059585,0,0,0,7.57415097249502,0.52418000472609,0,0.19351266257817,0,0,1.55182426381471,0,0,0,0,0,2.34661659281764,2.56508224804908,0.85381197895741,0.599428828746391,6.19588793762656,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,16.2990159653175,0.558564802544508,0.458320848023367,0.717873024576814,0.399358000997982,0.429226048136571,0.223171457441873,0.335917362433631,0,0,0,0.0824158583811665,0,0,22.2690863333013,0,0.136203406111576,0,0.412618309791701,0,2.4747128070665,1.5476039091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| 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| ||
|short_description=p1@IKZF3 | |||
}} | }} |
Latest revision as of 23:06, 19 September 2015
Short description: | p1@IKZF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IKZF3_5end |
Coexpression cluster: | C1325_CD19_cord_Eosinophils_b_B_Neutrophils_acute |
Association with transcript: | 0bp_to_ENST00000293068, ENST00000346872, ENST00000348427, ENST00000377944, ENST00000377945, ENST00000377952, ENST00000377958, ENST00000394189, ENST00000488188, ENST00000535189, NM_012481, NM_183228, NM_183229, NM_183230, NM_183231, NM_183232, uc002hsu.2, uc002hsv.2, uc002hsw.2, uc002hsx.2, uc002hsy.2, uc002hsz.2, uc002hta.2, uc002htb.2, uc002htc.2, uc002htd.2, uc010cwd.2, uc010cwe.2, uc010cwf.2, uc010cwg.2, uc010cwh.2_5end |
EntrezGene: | IKZF3 |
HGNC: | 13178 |
UniProt: | Q9UKT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.15e-56 | 53 |
common lymphoid progenitor | 3.15e-56 | 53 |
lymphoid lineage restricted progenitor cell | 6.30e-55 | 52 |
leukocyte | 2.92e-48 | 136 |
hematopoietic cell | 5.65e-41 | 177 |
hematopoietic stem cell | 2.11e-40 | 168 |
hematopoietic lineage restricted progenitor cell | 5.39e-39 | 120 |
nongranular leukocyte | 6.49e-39 | 115 |
hematopoietic oligopotent progenitor cell | 3.21e-36 | 161 |
hematopoietic multipotent progenitor cell | 3.21e-36 | 161 |
lymphocyte of B lineage | 3.48e-31 | 24 |
pro-B cell | 3.48e-31 | 24 |
T cell | 3.79e-21 | 25 |
pro-T cell | 3.79e-21 | 25 |
mature alpha-beta T cell | 1.03e-19 | 18 |
alpha-beta T cell | 1.03e-19 | 18 |
immature T cell | 1.03e-19 | 18 |
mature T cell | 1.03e-19 | 18 |
immature alpha-beta T cell | 1.03e-19 | 18 |
B cell | 6.09e-19 | 14 |
CD8-positive, alpha-beta T cell | 2.50e-13 | 11 |
CD4-positive, alpha-beta T cell | 2.57e-07 | 6 |
mesenchymal cell | 5.69e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
blood | 4.91e-17 | 15 |
haemolymphatic fluid | 4.91e-17 | 15 |
organism substance | 4.91e-17 | 15 |
hematopoietic system | 7.24e-14 | 98 |
blood island | 7.24e-14 | 98 |
hemolymphoid system | 5.24e-13 | 108 |
hemopoietic organ | 1.58e-08 | 7 |
immune organ | 1.58e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.23e-08 | 10 |