FFCP PHASE1:Hg19::chr11:70508440..70508453,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22941 | |EntrezGene=22941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14295 | |HGNC=14295 | ||
|TSSclassifier=strong | |||
|UniProt=B7ZKU9 | |UniProt=B7ZKU9 | ||
|association_with_transcript=-495bp_to_ENST00000449116_5end | |association_with_transcript=-495bp_to_ENST00000449116_5end | ||
|cluster_id=chr11:70508440..70508453,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_SHANK2_5end | |description=CAGE_peak_5_at_SHANK2_5end | ||
|id=chr11:70508440..70508453,- | |id=chr11:70508440..70508453,- | ||
|ontology_enrichment_celltype=CL:0000047!1.06e-09!8;CL:0000540!8.76e-07!6;CL:0000031!8.76e-07!6;CL:0000404!8.76e-07!6 | |ontology_enrichment_celltype=CL:0000047!1.06e-09!8;CL:0000540!8.76e-07!6;CL:0000031!8.76e-07!6;CL:0000404!8.76e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.27e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.67e-20;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;7.90e-70;22!UBERON:0001950;2.89e-69;20!UBERON:0000956;3.53e-61;25!UBERON:0000203;3.53e-61;25!UBERON:0001869;4.14e-60;32!UBERON:0003528;1.29e-59;34!UBERON:0002020;1.29e-59;34!UBERON:0002791;1.42e-55;32!UBERON:0001893;4.24e-55;34!UBERON:0002780;6.22e-49;41!UBERON:0001890;6.22e-49;41!UBERON:0000073;3.38e-43;53!UBERON:0002616;3.38e-43;53!UBERON:0000955;4.48e-31;68!UBERON:0001017;3.17e-29;75!UBERON:0000200;2.21e-25;6!UBERON:0001016;2.70e-24;83!UBERON:0002021;1.28e-21;5!UBERON:0001872;3.70e-21;5!UBERON:0002298;4.10e-16;6!UBERON:0001871;2.95e-15;6!UBERON:0000349;8.33e-14;5!UBERON:0001870;1.44e-13;3!UBERON:0000988;1.56e-12;3!UBERON:0002420;1.48e-11;9!UBERON:0007245;1.48e-11;9!UBERON:0010009;1.48e-11;9!UBERON:0010011;1.48e-11;9!UBERON:0000454;1.48e-11;9!UBERON:0011216;2.00e-11;132!UBERON:0000125;3.93e-11;9!UBERON:0002308;3.93e-11;9!UBERON:0007023;5.46e-11;114!UBERON:0000369;4.61e-10;4!UBERON:0002435;4.61e-10;4!UBERON:0000204;4.61e-10;4!UBERON:0002771;1.19e-09;2!UBERON:0002702;1.22e-09;2!UBERON:0001876;1.67e-09;2!UBERON:0001894;5.14e-09;7!UBERON:0000007;8.10e-09;2!UBERON:0002148;1.03e-08;2!UBERON:0006331;1.03e-08;2!UBERON:0009662;1.03e-08;2!UBERON:0004733;6.21e-08;12!UBERON:0002028;6.21e-08;12!UBERON:0000013;1.27e-07;5!UBERON:0002410;1.27e-07;5!UBERON:0004732;2.66e-07;13!UBERON:0010314;6.59e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.71e-76,56;UBERON:0005068,1.71e-76,56;UBERON:0006241,1.71e-76,56;UBERON:0007135,1.71e-76,56;UBERON:0000073,2.28e-76,53;UBERON:0002616,2.28e-76,53;UBERON:0002780,5.80e-72,41;UBERON:0001890,5.80e-72,41;UBERON:0003080,5.80e-72,41;UBERON:0006240,5.80e-72,41;UBERON:0001016,1.43e-70,89;UBERON:0002619,6.27e-70,22;UBERON:0003528,9.51e-70,34;UBERON:0002020,9.51e-70,34;UBERON:0001950,2.27e-69,20;UBERON:0000955,4.72e-69,68;UBERON:0006238,4.72e-69,68;UBERON:0001869,7.40e-69,32;UBERON:0001017,1.20e-67,81;UBERON:0001893,1.43e-64,34;UBERON:0002791,5.62e-63,32;UBERON:0000956,2.89e-61,25;UBERON:0000203,2.89e-61,25;UBERON:0003075,5.25e-50,82;UBERON:0007284,5.25e-50,82;UBERON:0002346,2.45e-47,86;UBERON:0003056,1.72e-46,61;UBERON:0010371,7.73e-38,104;UBERON:0007023,2.53e-34,114;UBERON:0004121,4.96e-33,171;UBERON:0000924,4.96e-33,171;UBERON:0006601,4.96e-33,171;UBERON:0010314,3.86e-30,132;UBERON:0011216,1.25e-27,223;UBERON:0000200,2.36e-25,6;UBERON:0002021,1.31e-21,5;UBERON:0001872,3.55e-21,5;UBERON:0000025,3.58e-18,192;UBERON:0002298,3.91e-16,6;UBERON:0001871,2.83e-15,6;UBERON:0000349,8.07e-14,5;UBERON:0001870,1.25e-13,3;UBERON:0004111,6.05e-13,240;UBERON:0000988,1.30e-12,3;UBERON:0002420,1.58e-11,9;UBERON:0007245,1.58e-11,9;UBERON:0010009,1.58e-11,9;UBERON:0010011,1.58e-11,9;UBERON:0000454,1.58e-11,9;UBERON:0000125,4.25e-11,9;UBERON:0002308,4.25e-11,9;UBERON:0000369,5.55e-10,4;UBERON:0002435,5.55e-10,4;UBERON:0000204,5.55e-10,4;UBERON:0010082,5.55e-10,4;UBERON:0002702,1.19e-09,2;UBERON:0002771,1.30e-09,2;UBERON:0001876,1.47e-09,2;UBERON:0000483,3.34e-09,306;UBERON:0000119,4.90e-09,309;UBERON:0001894,5.20e-09,7;UBERON:0006222,5.20e-09,7;UBERON:0003076,8.26e-09,15;UBERON:0003057,8.26e-09,15;UBERON:0002148,9.33e-09,2;UBERON:0006331,9.33e-09,2;UBERON:0009662,9.33e-09,2;UBERON:0000007,1.09e-08,2;UBERON:0004733,6.07e-08,12;UBERON:0002028,6.07e-08,12;UBERON:0007277,6.07e-08,12;UBERON:0000013,1.24e-07,5;UBERON:0002410,1.24e-07,5;UBERON:0004732,2.60e-07,13 | |||
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|short_description=p5@SHANK2 | |short_description=p5@SHANK2 | ||
}} | }} |
Latest revision as of 23:17, 19 September 2015
Short description: | p5@SHANK2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SHANK2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -495bp_to_ENST00000449116_5end |
EntrezGene: | SHANK2 |
HGNC: | 14295 |
UniProt: | B7ZKU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data