FFCP PHASE1:Hg19::chr6:116601292..116601319,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29940 | |EntrezGene=29940 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21144 | |HGNC=21144 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UL01 | |UniProt=Q9UL01 | ||
|association_with_transcript=9bp_to_ENST00000430252,ENST00000452085,NM_001080976,uc003pwr.2,uc003pws.2_5end | |association_with_transcript=9bp_to_ENST00000430252,ENST00000452085,NM_001080976,uc003pwr.2,uc003pws.2_5end | ||
|cluster_id=chr6:116601292..116601319,+ | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_7_at_DSE_5end | |description=CAGE_peak_7_at_DSE_5end | ||
|id=chr6:116601292..116601319,+ | |id=chr6:116601292..116601319,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.06e-18!140;CL:0000542!5.58e-18!53;CL:0000051!5.58e-18!53;CL:0000838!1.98e-17!52;CL:0000037!3.09e-14!172;CL:0000566!3.09e-14!172;CL:0000988!1.73e-12!182;CL:0002032!2.45e-12!165;CL:0000837!2.45e-12!165;CL:0002031!6.83e-12!124;CL:0002087!7.07e-12!119;CL:0000084!2.57e-10!25;CL:0000827!2.57e-10!25;CL:0000791!7.42e-09!18;CL:0000789!7.42e-09!18;CL:0002420!7.42e-09!18;CL:0002419!7.42e-09!18;CL:0000790!7.42e-09!18;CL:0002393!6.75e-08!9;CL:0002397!6.75e-08!9;CL:0000624!1.43e-07!6 | |ontology_enrichment_celltype=CL:0000738!3.06e-18!140;CL:0000542!5.58e-18!53;CL:0000051!5.58e-18!53;CL:0000838!1.98e-17!52;CL:0000037!3.09e-14!172;CL:0000566!3.09e-14!172;CL:0000988!1.73e-12!182;CL:0002032!2.45e-12!165;CL:0000837!2.45e-12!165;CL:0002031!6.83e-12!124;CL:0002087!7.07e-12!119;CL:0000084!2.57e-10!25;CL:0000827!2.57e-10!25;CL:0000791!7.42e-09!18;CL:0000789!7.42e-09!18;CL:0002420!7.42e-09!18;CL:0002419!7.42e-09!18;CL:0000790!7.42e-09!18;CL:0002393!6.75e-08!9;CL:0002397!6.75e-08!9;CL:0000624!1.43e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000624;3.87e-21;6!CL:0000791;7.92e-18;18!CL:0000789;7.92e-18;18!CL:0002419;7.92e-18;18!CL:0000084;2.13e-17;25!CL:0000542;1.55e-13;53!CL:0000623;1.82e-11;3!CL:0000898;2.84e-11;3!CL:0000767;9.39e-11;3!CL:0000094;2.15e-10;8!CL:0000815;5.57e-08;2!CL:0000792;5.57e-08;2!CL:0002677;5.57e-08;2!CL:0000771;8.81e-08;2!CL:0000081;1.84e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.26e-21,52;CL:0000624,3.75e-21,6;CL:0000542,1.03e-20,53;CL:0000051,1.03e-20,53;CL:0000791,7.87e-18,18;CL:0000789,7.87e-18,18;CL:0002420,7.87e-18,18;CL:0002419,7.87e-18,18;CL:0000790,7.87e-18,18;CL:0000084,2.14e-17,25;CL:0000827,2.14e-17,25;CL:0000738,5.36e-17,136;CL:0000037,2.59e-13,168;CL:0000988,3.13e-12,177;CL:0002087,7.61e-12,115;CL:0000623,1.88e-11,3;CL:0000825,1.88e-11,3;CL:0000898,2.84e-11,3;CL:0002032,4.49e-11,161;CL:0000837,4.49e-11,161;CL:0002031,5.21e-11,120;CL:0000767,1.06e-10,3;CL:0000094,2.13e-10,8;CL:0000815,5.48e-08,2;CL:0000792,5.48e-08,2;CL:0002677,5.48e-08,2;CL:0000771,7.70e-08,2;CL:0000081,1.83e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;7.92e-18;18!CL:0000051;1.55e-13;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.26064981382698,7.29275856384704,2.01260960310899,0,0.30120591877825,0,0.232401601740905,0.142169232487422,3.81680571135301,3.87796785972314,3.20871115952227,4.34021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0.434377689410233,0,0,0,0.422510572623884,0.425208599930087,0.628975936525128,0.44931452458598,0.600707571366025,0.16072558669708,0.570025487482497,0.59675003159727,0.182664153764634,3.51992488922645,0,0,0.853460445133014,0,1.14950487990897,0,0.954053754535364,2.84606484554724,5.87237189370939,3.82273228125229,2.64342657158052,0,1.84368859342554,23.9985919538876,18.8645166119599,26.5225933709367,1.00311897234407,14.6665019985116,16.5706732007157,29.2240092611867,1.33692548262208,8.83817722424511,6.20294904834139,11.1029584143656,1.28091319725675,1.04047478047903,0.328875809207352,0.276350017785848,0.579606171470105,31.4367513903568,24.3462153561639,16.7256838087963,0.453237370790265,19.544245173698,38.8299013395372,30.8684024263793,0,0.651083453856419,0,2.25862678616659,0.127986611154418,0,0.473554504088034,0,32.6602924024067,19.7905744879795,18.6823481008811,0,0,0,0,0,0,0,0,0,0,0.087834785693126,2.94702919869853,0,0,0,0,0,0.715471872916026,0,0.74291500265913,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,11.6334079244498,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.772921620136887,0,0.168776332241266,0,0.504867548488229,0,0.161646056818812,0.710019185033229,0,0,0,0.272746120590835,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0.176096868026452,2.48793738648926,0.864719720501769,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,25.0229065456448,18.1127162881995,15.2728213172901,0,0,0,0.335032530668698,0.637938751653163,0,0,0.828831026872071,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,3.72182447021197,4.74571241800957,0.74709290462411,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,1.03850885836724,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0.144269212976445,0.284567373393656,0.159426272728822,0,0.191505370132367,0.423347165447766,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0,0.834245708559542,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0,0,0.422250816255987,0.19924798825107,0,0.251932747854276,0,0.369254416383208,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.349839999984783,0,0,0,0.472775363535873,0.344743373241465,0,0,0,0,1.52581736317083,0,0.295547618953547,0.219385397153973,0.32681539055697,0.139423744278603,0.0769502585037971,0,0.23056390438806,0.179515288819544,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0.104421949505455,0.134802265961354,0,0.234264445725339,0.547364367646998,0,0.242780379534093,0,0,0,0.568679216656392,0.150323419414493,0.103688191397247,0,0,0,1.19472429772959,0,0,0,0,0.174118413160805,0.52418000472609,0,0.0967563312890851,0,0,0,0,0,0,0.19871461170299,0.126621591911757,0.391102765469606,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0.407992870545287,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.0984274815147488,0.931406652723629,0,0,1.60753148465019,1.65047323916681,4.15440338029185,0.674921674654501,0.77380195455795,0.121499113316049,0.670869375198532,0.0788057072991982,0,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0.410462603746695,0,0,0,0,0.129282956361551,0,0,0,0,0.471612915298998,0,0,0,0.60896299190448,0,0,0.2506898940227,0,0.327872630709804,0,0,0.366078794705889,0.1251909307065,0,0.221858103073705,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0,0,0,0.149254802886874,0,1.10961172300523,0,0.251567901752575,0,0,0.302461847526478,0.15543720058278,0.147855149989634,0.63718706865481,0,0.465788870628778,0.414706207840855,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0.398594520940089,0.163565394255844,0,0,0,0.39997479170986,0,0.172214979660816,0,0,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0,0.169732529954025,0,0,0,0.318004350653419,0.0788617450012534,1.60114149657094,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.322951291263702,0,0.0981477185010256,0.235939446695481,0.183428598521679,0,0,0,0,0,0,0,0,0,0.147856086217045,0.135075169236789,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0.535701835878287,1.3451348888753,1.21393120847326,0.455324382702595,0,0.691403925334676,0.342976018874837,0.0679697329768317,0.263091094251396,0,0,0,0.157115589916002,0,0,0.215927591218621,0,0.0714765441766563,0,1.04617282831313,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.994753875806841,0,0.11294608203896,0.219881033490858,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0.199882311849858,0,0,0.160482733378337,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0.378499274505237,0.546327859818478,0.253397002022874,0,0,0,0.250707539292375,3.56159881625725,5.35928260312357,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0.784923038064294,0,0,0,0,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.26064981382698,7.29275856384704,2.01260960310899,0,0.30120591877825,0,0.232401601740905,0.142169232487422,3.81680571135301,3.87796785972314,3.20871115952227,4.34021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0.434377689410233,0,0,0,0.422510572623884,0.425208599930087,0.628975936525128,0.44931452458598,0.600707571366025,0.16072558669708,0.570025487482497,0.59675003159727,0.182664153764634,3.51992488922645,0,0,0.853460445133014,0,1.14950487990897,0,0.954053754535364,2.84606484554724,5.87237189370939,3.82273228125229,2.64342657158052,0,1.84368859342554,23.9985919538876,18.8645166119599,26.5225933709367,1.00311897234407,14.6665019985116,16.5706732007157,29.2240092611867,1.33692548262208,8.83817722424511,6.20294904834139,11.1029584143656,1.28091319725675,1.04047478047903,0.328875809207352,0.276350017785848,0.579606171470105,31.4367513903568,24.3462153561639,16.7256838087963,0.453237370790265,19.544245173698,38.8299013395372,30.8684024263793,0,0.651083453856419,0,2.25862678616659,0.127986611154418,0,0.473554504088034,0,32.6602924024067,19.7905744879795,18.6823481008811,0,0,0,0,0,0,0,0,0,0,0.087834785693126,2.94702919869853,0,0,0,0,0,0.715471872916026,0,0.74291500265913,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,11.6334079244498,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.772921620136887,0,0.168776332241266,0,0.504867548488229,0,0.161646056818812,0.710019185033229,0,0,0,0.272746120590835,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0.176096868026452,2.48793738648926,0.864719720501769,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,25.0229065456448,18.1127162881995,15.2728213172901,0,0,0,0.335032530668698,0.637938751653163,0,0,0.828831026872071,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,3.72182447021197,4.74571241800957,0.74709290462411,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,1.03850885836724,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0.144269212976445,0.284567373393656,0.159426272728822,0,0.191505370132367,0.423347165447766,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0,0.834245708559542,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0,0,0.422250816255987,0.19924798825107,0,0.251932747854276,0,0.369254416383208,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.349839999984783,0,0,0,0.472775363535873,0.344743373241465,0,0,0,0,1.52581736317083,0,0.295547618953547,0.219385397153973,0.32681539055697,0.139423744278603,0.0769502585037971,0,0.23056390438806,0.179515288819544,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0.104421949505455,0.134802265961354,0,0.234264445725339,0.547364367646998,0,0.242780379534093,0,0,0,0.568679216656392,0.150323419414493,0.103688191397247,0,0,0,1.19472429772959,0,0,0,0,0.174118413160805,0.52418000472609,0,0.0967563312890851,0,0,0,0,0,0,0.19871461170299,0.126621591911757,0.391102765469606,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0.407992870545287,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.0984274815147488,0.931406652723629,0,0,1.60753148465019,1.65047323916681,4.15440338029185,0.674921674654501,0.77380195455795,0.121499113316049,0.670869375198532,0.0788057072991982,0,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0.410462603746695,0,0,0,0,0.129282956361551,0,0,0,0,0.471612915298998,0,0,0,0.60896299190448,0,0,0.2506898940227,0,0.327872630709804,0,0,0.366078794705889,0.1251909307065,0,0.221858103073705,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0,0,0,0.149254802886874,0,1.10961172300523,0,0.251567901752575,0,0,0.302461847526478,0.15543720058278,0.147855149989634,0.63718706865481,0,0.465788870628778,0.414706207840855,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0.398594520940089,0.163565394255844,0,0,0,0.39997479170986,0,0.172214979660816,0,0,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0,0.169732529954025,0,0,0,0.318004350653419,0.0788617450012534,1.60114149657094,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.322951291263702,0,0.0981477185010256,0.235939446695481,0.183428598521679,0,0,0,0,0,0,0,0,0,0.147856086217045,0.135075169236789,0,0.206686796501184,0,0,0,0,0.175871244359621,0,0.535701835878287,1.3451348888753,1.21393120847326,0.455324382702595,0,0.691403925334676,0.342976018874837,0.0679697329768317,0.263091094251396,0,0,0,0.157115589916002,0,0,0.215927591218621,0,0.0714765441766563,0,1.04617282831313,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.994753875806841,0,0.11294608203896,0.219881033490858,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0.199882311849858,0,0,0.160482733378337,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0.378499274505237,0.546327859818478,0.253397002022874,0,0,0,0.250707539292375,3.56159881625725,5.35928260312357,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0.784923038064294,0,0,0,0,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@DSE | |short_description=p7@DSE | ||
}} | }} |
Latest revision as of 00:53, 20 September 2015
Short description: | p7@DSE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DSE_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 9bp_to_ENST00000430252, ENST00000452085, NM_001080976, uc003pwr.2, uc003pws.2_5end |
EntrezGene: | DSE |
HGNC: | 21144 |
UniProt: | Q9UL01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.26e-21 | 52 |
CD4-positive, alpha-beta T cell | 3.75e-21 | 6 |
lymphocyte | 1.03e-20 | 53 |
common lymphoid progenitor | 1.03e-20 | 53 |
mature alpha-beta T cell | 7.87e-18 | 18 |
alpha-beta T cell | 7.87e-18 | 18 |
immature T cell | 7.87e-18 | 18 |
mature T cell | 7.87e-18 | 18 |
immature alpha-beta T cell | 7.87e-18 | 18 |
T cell | 2.14e-17 | 25 |
pro-T cell | 2.14e-17 | 25 |
leukocyte | 5.36e-17 | 136 |
hematopoietic stem cell | 2.59e-13 | 168 |
hematopoietic cell | 3.13e-12 | 177 |
nongranular leukocyte | 7.61e-12 | 115 |
natural killer cell | 1.88e-11 | 3 |
pro-NK cell | 1.88e-11 | 3 |
naive T cell | 2.84e-11 | 3 |
hematopoietic oligopotent progenitor cell | 4.49e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.49e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 5.21e-11 | 120 |
basophil | 1.06e-10 | 3 |
granulocyte | 2.13e-10 | 8 |
regulatory T cell | 5.48e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.48e-08 | 2 |
naive regulatory T cell | 5.48e-08 | 2 |
eosinophil | 7.70e-08 | 2 |
blood cell | 1.83e-07 | 11 |