FFCP PHASE1:Hg19::chr6:86159843..86159854,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4907 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8021 | |||
|TSSclassifier=strong | |||
|UniProt=B3KQI8 | |||
|association_with_transcript=16bp_to_ENST00000369651_5end | |||
|cluster_id=chr6:86159843..86159854,+ | |||
|coexpression_cluster_id=C2870 | |||
|description=CAGE_peak_4_at_NT5E_5end | |||
|id=chr6:86159843..86159854,+ | |||
|ontology_enrichment_celltype=CL:0000220!2.07e-27!246;CL:0002321!1.68e-26!248;CL:0000055!2.92e-24!180;CL:0000548!1.04e-16!679;CL:0000004!1.04e-16!679;CL:0000255!1.04e-16!679;CL:0000012!3.33e-16!682;CL:0000222!2.05e-15!119;CL:0002371!3.76e-15!591;CL:0000680!1.48e-13!57;CL:0000056!1.48e-13!57;CL:0000355!1.48e-13!57;CL:0000066!1.63e-13!254;CL:0000144!2.56e-13!625;CL:0000359!2.72e-13!32;CL:0000057!4.35e-13!75;CL:0000192!6.26e-13!42;CL:0000514!6.26e-13!42;CL:0000187!4.69e-12!54;CL:0000183!1.55e-11!59;CL:0002076!1.00e-09!43;CL:0000003!1.05e-09!722;CL:0000393!2.39e-09!60;CL:0000211!2.39e-09!60;CL:0000223!2.43e-09!59;CL:0002368!1.17e-07!13;CL:0002620!1.49e-07!23;CL:0000499!2.02e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.10e-14;32!CL:0000192;4.46e-10;43!CL:0000499;1.03e-08;28!CL:0002620;1.59e-08;23!CL:0002368;2.58e-08;13!CL:0000134;8.29e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.74e-23,250;CL:0000359,1.41e-14,32;CL:0000057,1.58e-14,76;CL:0000192,2.24e-13,43;CL:0000514,2.24e-13,43;CL:0000680,7.01e-13,58;CL:0000056,7.01e-13,58;CL:0000355,7.01e-13,58;CL:0000222,1.75e-12,121;CL:0000187,2.95e-11,55;CL:0000066,1.27e-09,253;CL:0000499,6.83e-09,28;CL:0000393,1.18e-08,61;CL:0000211,1.18e-08,61;CL:0002076,1.24e-08,42;CL:0002620,1.51e-08,23;CL:0002368,2.46e-08,13;CL:0000223,2.74e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000514;4.46e-10;43!CL:0000355;6.29e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;7.29e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.77e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!8.25e-19!83;UBERON:0002329!8.25e-19!83;UBERON:0003077!8.25e-19!83;UBERON:0003059!8.25e-19!83;UBERON:0007282!8.25e-19!83;UBERON:0009618!8.25e-19!83;UBERON:0007285!8.25e-19!83;UBERON:0000486!1.16e-18!82;UBERON:0005256!3.57e-17!143;UBERON:0000475!1.31e-15!365;UBERON:0003102!4.79e-15!95;UBERON:0004290!2.99e-14!70;UBERON:0002049!8.26e-14!79;UBERON:0007798!8.26e-14!79;UBERON:0002100!1.35e-13!216;UBERON:0001637!2.66e-13!42;UBERON:0003509!2.66e-13!42;UBERON:0004572!2.66e-13!42;UBERON:0000119!2.97e-12!312;UBERON:0000055!6.75e-12!69;UBERON:0001981!7.01e-12!60;UBERON:0007500!7.01e-12!60;UBERON:0004537!7.01e-12!60;UBERON:0006965!7.01e-12!60;UBERON:0004573!9.37e-12!33;UBERON:0004571!9.37e-12!33;UBERON:0000481!1.06e-11!347;UBERON:0000483!1.39e-11!309;UBERON:0000490!4.66e-11!138;UBERON:0001134!4.79e-11!61;UBERON:0002036!4.79e-11!61;UBERON:0003082!4.79e-11!61;UBERON:0000467!6.09e-11!625;UBERON:0002385!6.82e-11!63;UBERON:0001015!6.82e-11!63;UBERON:0000383!6.82e-11!63;UBERON:0003104!9.60e-11!238;UBERON:0009142!9.60e-11!238;UBERON:0000480!1.00e-10!626;UBERON:0003914!5.94e-10!118;UBERON:0004872!7.26e-10!84;UBERON:0000468!7.40e-10!659;UBERON:0000477!3.31e-09!286;UBERON:0002097!1.46e-08!40;UBERON:0002199!1.81e-08!45;UBERON:0002416!1.81e-08!45;UBERON:0003100!3.46e-08!41;UBERON:0003134!3.08e-07!37;UBERON:0000474!3.08e-07!37;UBERON:0004535!4.68e-07!110;UBERON:0004111!6.33e-07!241;UBERON:0001444!6.33e-07!48;UBERON:0000923!8.68e-07!604;UBERON:0005291!8.68e-07!604;UBERON:0006598!8.68e-07!604;UBERON:0002532!8.68e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.53e-11;33!UBERON:0004571;3.53e-11;33!UBERON:0001637;3.89e-09;42!UBERON:0003509;3.89e-09;42!UBERON:0004572;3.89e-09;42!UBERON:0002097;3.09e-08;41!UBERON:0007500;1.34e-07;56!UBERON:0001981;1.34e-07;56!UBERON:0004537;1.34e-07;56!UBERON:0002199;1.61e-07;46!UBERON:0002416;1.61e-07;46!UBERON:0002049;2.78e-07;75!UBERON:0007798;2.78e-07;75!UBERON:0003102;3.90e-07;50!UBERON:0000075;4.10e-07;16!UBERON:0000055;4.95e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,3.13e-19,83;UBERON:0003102,3.53e-18,99;UBERON:0002329,1.66e-14,71;UBERON:0003059,1.66e-14,71;UBERON:0007282,1.66e-14,71;UBERON:0004290,1.66e-14,71;UBERON:0009618,1.66e-14,71;UBERON:0007524,2.52e-14,73;UBERON:0003077,5.21e-14,72;UBERON:0007285,5.21e-14,72;UBERON:0007503,8.61e-14,78;UBERON:0002049,8.64e-14,78;UBERON:0007798,8.64e-14,78;UBERON:0001637,3.11e-13,42;UBERON:0003509,3.11e-13,42;UBERON:0004572,3.11e-13,42;UBERON:0000490,6.20e-13,148;UBERON:0004573,3.22e-12,33;UBERON:0004571,3.22e-12,33;UBERON:0000055,3.61e-12,68;UBERON:0007500,9.39e-12,59;UBERON:0001981,9.39e-12,59;UBERON:0004537,9.39e-12,59;UBERON:0006965,9.39e-12,59;UBERON:0001134,6.18e-11,62;UBERON:0002036,6.18e-11,62;UBERON:0003082,6.18e-11,62;UBERON:0002097,1.09e-10,41;UBERON:0005256,1.16e-10,122;UBERON:0002385,1.80e-10,64;UBERON:0001015,1.80e-10,64;UBERON:0000383,1.80e-10,64;UBERON:0002199,2.63e-10,46;UBERON:0002416,2.63e-10,46;UBERON:0004872,1.02e-09,83;UBERON:0003914,4.40e-09,117;UBERON:0000119,1.26e-08,309;UBERON:0003104,1.50e-08,160;UBERON:0009142,1.50e-08,160;UBERON:0002100,4.20e-08,199;UBERON:0000483,5.00e-08,306;UBERON:0004535,5.96e-08,109;UBERON:0000033,9.10e-08,56;UBERON:0003100,1.10e-07,41;UBERON:0001009,3.12e-07,112;UBERON:0000075,4.15e-07,16;UBERON:0004923,4.23e-07,66;UBERON:0011137,9.96e-07,14 | |||
|phase1_expression=0.726713517082227,1.07050261945492,0.704772020479856,3.00219895059391,0,1.74467704820074,0,1.89515962028049,0.783556884599516,0.245733936501509,0,1.74753097704138,2.11013582582763,2.22779435328084,3.97676850873499,3.36162573225888,5.42425075221579,8.03341099426111,5.85519358548608,1.47745269692145,1.83600622119828,0.626909442956176,1.43117993565528,3.28498620174922,0.753255837568817,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,15.6301608161418,20.482002476921,15.5296684270051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0.545812300115692,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,1.77901850772711,0,0.800791974072025,2.29900975981793,0,0,0,0,1.14681968437569,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0.950452044448374,0,0,0,0.473554504088034,0,0,0,0,0,1.34140171940727,0.12786256184353,12.2889311810753,2.50668955317945,7.38717246700201,11.9292892057665,5.35298357332899,2.17430079477356,2.88248216701333,1.14185221401064,0.196468613246569,3.64295288292542,2.59549109949101,0,0,0,0,0,0,1.59009925893364,3.4409383804245,1.73570250803797,0.56530794192401,0.419499436209906,0.825354125820202,1.67195973229448,1.55050055501597,1.77883131343355,2.00832367658802,6.0424397566372,4.56163263431108,6.58967555380058,5.14728312484216,0.81014194788176,2.05389375053383,1.79623498100936,2.13961812918312,0,0,1.28241220751285,0,0,0.872188104285069,2.98183171017191,2.91250176828533,5.29636723252875,7.45775213946916,2.83734705758686,2.80338800071154,0,2.4666754841716,0.622422070799533,2.42479209725439,2.45192854670188,1.81628913173918,1.72852777344,0.937285727335186,15.2958437646857,4.56377457235559,13.5998299302139,5.87172493218824,4.53244244230768,4.9157782345787,5.9204709663919,10.072414019565,4.33968280938215,7.12801714369232,6.92347401979959,1.82032272387605,0,5.55509176048418,6.13080747372624,9.14311581097804,4.82875382968922,7.04921930337745,10.3664260645552,2.04177929688038,5.91985797773244,2.34913127700424,2.96704661623387,14.7044637081357,2.37020817248409,4.89517026086695,2.41951913231067,8.27004027982204,2.33848812386877,2.77677151668526,1.84099797284599,3.87950536365149,9.58525899794859,3.22406714328449,3.22165125389926,28.022823708678,29.1838349032193,21.2235400587863,0,0,0.116193942869518,0,0,0,4.69348596989448,3.85944562915731,6.90674606762403,3.71494342425583,6.49691533502627,1.0647612003586,0.337169380156203,0.964044119533928,0.992645754591546,1.52515610864684,0.71181185733329,0.808987848960987,0.784885860501384,1.53898862778556,1.4763109092493,2.80483547606892,0,1.47008711385542,1.26755034821831,4.91413608338813,2.36315962672562,0,0.368965315629341,6.17644117074692,10.2067765430022,15.7362454560667,21.0105552340308,10.6476711932309,2.6064664424826,2.07986957055916,2.88662684050547,4.75314660397815,1.05667824812239,4.90845922387651,4.62985512576611,3.99533719692656,0.790204397959275,0.858486162094873,0,0,0,24.370796836562,27.549069024613,39.8388023251106,26.4197641973402,31.9697332365358,15.7186898457737,0.985326475791887,0,0,0,0.12624243342638,0.571481048629521,2.29193055334967,0,5.13217338068116,1.43958489784653,1.8020583470635,0.285826432630578,6.2793407233402,1.74384027533312,9.02060915597685,3.87815147273333,0,3.381211010224,1.59562869950922,7.28052058379563,1.54324424557285,5.67396528093113,3.46348832720929,0,0,0,4.23457039581856,0,3.16780749173372,2.41151501647669,2.61460037580088,0.499864955910285,0,0,0,5.03212196532324,2.29723871668228,18.5427976552934,11.4377232267388,11.0957214177207,14.3248770591916,0,0,0,0,0.508189248444927,0,0,0.837581326671744,0,0,0,0,1.59498939234882,2.50085260529839,5.96783052139418,3.53550464602372,2.49800584316026,1.57702415033935,2.6942525448324,2.40756879782175,2.27407504055985,2.0694614258501,3.98535359121262,1.84369168541703,3.38846096425523,0.783204629850962,1.02943027143257,0,0,0.106727557803444,0.303127571446259,3.32870879020994,1.81434175997808,2.48107807818777,1.53461973288062,0.841980283299221,1.40953064181271,1.02341449813341,1.93024705372329,1.48418066444991,4.00945203886904,4.08391968220192,6.48804532509092,6.23105315020345,8.59956800603698,0,17.2435564460825,3.03867263488458,1.95184561879831,5.09855270418808,2.75361271414791,2.70719767744447,7.3164570249194,0.784349769176855,1.46139224653261,7.91637216696568,3.4120015221269,1.70093705276516,4.31831832204279,1.54227252690289,0.541892875087706,0.501689773854853,4.33289664176565,2.49322802678617,0.895499018888713,0,0,1.28225062558195,1.31205858279882,0.976135183992909,1.33953315142039,0,0.082509499920588,6.3169209179579,3.90036147621913,4.82051789532479,2.51343867559517,0.770243085573222,1.99554777143968,3.30807773962873,0.859361958946189,0.580066775656914,2.38634556765083,0.267096106940212,17.6854859436247,21.5252875448919,19.1419068741876,6.37294019389965,6.04299214086472,28.6479235615882,9.7585217822484,9.54904098545875,3.19383618190213,1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| |||
|short_description=p4@NT5E | |||
}} |
Latest revision as of 01:07, 20 September 2015
Short description: | p4@NT5E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NT5E_5end |
Coexpression cluster: | C2870_Smooth_leiomyoma_giant_Synoviocyte_Urothelial_Myoblast_mesenchymal |
Association with transcript: | 16bp_to_ENST00000369651_5end |
EntrezGene: | NT5E |
HGNC: | 8021 |
UniProt: | B3KQI8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.74e-23 | 250 |
vascular associated smooth muscle cell | 1.41e-14 | 32 |
fibroblast | 1.58e-14 | 76 |
smooth muscle cell | 2.24e-13 | 43 |
smooth muscle myoblast | 2.24e-13 | 43 |
muscle precursor cell | 7.01e-13 | 58 |
myoblast | 7.01e-13 | 58 |
multi-potent skeletal muscle stem cell | 7.01e-13 | 58 |
mesodermal cell | 1.75e-12 | 121 |
muscle cell | 2.95e-11 | 55 |
epithelial cell | 1.27e-09 | 253 |
stromal cell | 6.83e-09 | 28 |
electrically responsive cell | 1.18e-08 | 61 |
electrically active cell | 1.18e-08 | 61 |
endo-epithelial cell | 1.24e-08 | 42 |
skin fibroblast | 1.51e-08 | 23 |
respiratory epithelial cell | 2.46e-08 | 13 |
endodermal cell | 2.74e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.77e-07 | 14 |