FFCP PHASE1:Hg19::chr19:55919144..55919163,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17895 | |||
|TSSclassifier=strong | |||
|UniProt=Q16763 | |||
|association_with_transcript=161bp_to_ENST00000264552,NM_014501,uc002qkx.1_5end | |||
|cluster_id=chr19:55919144..55919163,- | |||
|description=CAGE_peak_1_at_UBE2S_5end | |||
|id=chr19:55919144..55919163,- | |||
|ontology_enrichment_celltype=CL:0000548!7.00e-33!679;CL:0000004!7.00e-33!679;CL:0000255!7.00e-33!679;CL:0000012!1.09e-32!682;CL:0000003!2.04e-18!722;CL:0000066!1.56e-17!254;CL:0002321!2.05e-17!248;CL:0000220!6.03e-17!246;CL:0000144!6.18e-17!625;CL:0000055!5.56e-14!180;CL:0000222!1.34e-12!119;CL:0002371!1.23e-11!591;CL:0000063!1.98e-11!578;CL:0000076!1.73e-08!62;CL:0000333!3.39e-08!41;CL:0000393!4.08e-07!60;CL:0000211!4.08e-07!60;CL:0000133!4.95e-07!59;CL:0000183!5.53e-07!59;CL:1000449!8.92e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.67e-07;15!CL:1000497;5.01e-07;17!CL:0002518;5.01e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.35e-18,253;CL:0002321,1.77e-17,250;CL:0000222,1.33e-12,121;CL:0000333,3.39e-08,41;CL:0000076,4.40e-08,63;CL:1000449,1.67e-07,15;CL:0000133,4.95e-07,59;CL:1000497,4.99e-07,17;CL:0002518,4.99e-07,17;CL:0000393,7.73e-07,61;CL:0000211,7.73e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.77e-29!235;DOID:14566!4.08e-28!239;DOID:0050686!2.06e-17!137;DOID:0050687!1.86e-14!143;DOID:2531!6.83e-11!51;DOID:0060083!6.83e-11!51;DOID:305!2.20e-10!106;DOID:1240!4.22e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.93e-07;39!DOID:2531;6.66e-07;51!DOID:0060083;6.66e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.77e-29,235;DOID:14566,4.08e-28,239;DOID:0050686,2.06e-17,137;DOID:0050687,1.86e-14,143;DOID:2531,6.83e-11,51;DOID:0060083,6.83e-11,51;DOID:305,2.20e-10,106;DOID:1240,4.22e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0003914!2.38e-07!118;UBERON:0001851!7.74e-07!16;UBERON:0004211!8.92e-07!16;UBERON:0001285!8.92e-07!16;UBERON:0007684!8.92e-07!16;UBERON:0003220!8.92e-07!16;UBERON:0004208!8.92e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0001851;1.44e-07;15!UBERON:0006555;1.67e-07;15!UBERON:0004819;1.67e-07;15!UBERON:0001285;1.67e-07;15!UBERON:0007684;1.67e-07;15!UBERON:0000353;3.84e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,9.90e-08,148;UBERON:0007503,1.21e-07,78;UBERON:0001851,1.43e-07,15;UBERON:0003914,1.53e-07,117;UBERON:0004211,1.67e-07,15;UBERON:0009773,1.67e-07,15;UBERON:0001231,1.67e-07,15;UBERON:0001285,1.67e-07,15;UBERON:0007684,1.67e-07,15;UBERON:0004208,1.67e-07,15;UBERON:0000353,3.88e-07,15 | |||
|phase1_expression=31.7937163723474,42.6060042543056,27.9089720110023,73.0535077977852,43.3552261594469,83.7444983136354,126.649939084155,45.4838308867318,34.2153172941788,318.471181705955,1112.99286291602,128.225085440411,121.860343941546,33.1693825932925,55.6747591222898,45.7181099587207,60.8721473304217,61.3460475925393,77.0933822089001,269.142632955858,399.841354838736,243.240863866996,200.078955004609,287.436292653057,331.558111169874,109.958890871302,124.053990658868,111.690598684111,101.487983427017,37.9991104116241,48.3026304746157,467.985403259774,367.471220909465,200.406673510399,296.544443821395,182.829632978824,78.0977168630694,40.9956602313589,37.5018116769165,49.0444567817825,20.3763081558331,11.6601719766833,16.9999874638563,26.4624794578808,27.5849438892831,39.2986179124262,48.1128106394767,43.9949640183354,79.9042436909367,67.8954045880275,58.660801795164,66.2150243688039,100.665738775093,96.8227025375739,123.238102800851,30.495259005902,37.115236407867,51.6864014223695,95.8042583120925,49.4230701697184,127.228088034009,57.0642749323019,46.8739595410835,67.3435105841657,63.5558232596599,74.3274644345393,104.634137831257,71.8571182634286,62.056467292004,62.7675761197787,85.361329871305,78.0748588293637,103.79966308061,16.9004229049553,24.8747030959101,18.4499608047371,21.5670971801271,21.4752956763354,14.6260283894343,23.3710449867824,17.9025009479181,18.9970719915219,28.1593991138116,16.9302969491261,19.5692035849982,32.004766692488,15.2150475073685,20.6910878383614,18.5092564379761,17.1729675816366,21.630092826159,23.4894875748376,33.2577708468949,62.1205244321422,74.5476388765443,70.3235506349456,44.0629885054986,60.5236574633714,87.1750355757919,25.2451608039924,35.1996047964278,27.4599727326145,15.5861382726329,43.3386677283325,34.4688911745559,27.9132707175363,20.5810936461412,83.1312665019632,78.5558459261665,68.0772925059219,69.3638544642479,38.2540073170269,21.2049785321746,13.9121230606651,16.7256838087963,77.050353034345,50.2018846618517,45.3588228037071,24.7959298179113,17.8396632021494,23.4390043388311,22.810849066761,19.4241903610327,14.3345004492949,11.2437653897111,13.2595261144649,18.8859439291841,94.7551693156242,95.2087096989286,77.7707048850631,51.199441925932,112.677744430211,138.219429352856,276.500951574193,64.1712525613939,71.8438734045686,82.7097384933143,88.5675463950797,126.771189817015,140.354708593803,146.9475964646,74.7235625714451,224.405897588206,292.548925356915,46.4102772926197,40.5722287907293,39.7544301951407,41.4973686291295,56.0555012564525,40.117410143593,251.036920504149,260.651082317156,240.568367614063,175.810769938367,184.579751932359,250.632536207401,301.161746779544,37.4704300795527,38.4227563701647,36.4845467913491,170.396801137169,134.568162712177,102.017940055135,177.213604726709,132.053137504727,107.159673940896,161.885677663468,251.348824438775,547.340395753203,280.033369572598,273.703405432028,56.6655794975072,104.700671320048,176.181997065584,69.0791012856493,150.437047857521,24.3632892696323,73.7170115324451,205.707661675047,202.965291251515,260.46754958048,206.70740557358,56.3291974073577,135.384225430037,203.346607473143,83.7006574876471,76.0552220313598,362.495255046883,86.1561812051685,230.470615903958,80.1044927757654,277.380285796573,272.432165371565,276.266736783323,72.0664224529773,230.928516546124,69.3315991689386,81.9721971524617,97.4231701357514,206.606629159932,268.044566897457,223.213687103092,198.813328076551,117.475184965294,201.490727984305,168.568287689461,115.833543416986,324.98320475346,105.66049542074,45.4877238183549,52.7710433887309,130.539626796715,70.5909825283306,45.3447350480307,54.904472617819,73.0801518604683,134.365630117293,65.3803475292257,36.3597099637082,33.2990877046753,79.5221487237216,217.32227587702,251.119237211832,78.0773846779719,93.8246654832471,91.4906659290922,226.261224870399,188.192271016509,193.579108820618,165.339382749516,206.65077686714,334.684238272536,226.851821878233,116.426609812912,379.871033719321,42.2574814509101,39.7033714918272,138.064035646498,123.741162517327,143.642573810555,138.749817697352,125.280680353134,132.634276083103,141.168379643692,112.434899516823,110.80718120056,154.274490016551,541.333246881301,166.275900577886,239.624199558433,3.80265104465493,32.4332981503617,23.0408063605748,221.17301280674,85.599953226007,90.5878038376215,44.4488655904933,171.974682484158,159.841066134493,56.293774656386,612.1938056781,437.812544602703,203.507192255635,85.9044300865319,86.6476163460364,95.7149548655919,130.561914546604,80.0969980907659,327.14462075514,277.291030356644,22.898181566128,38.376699482835,69.4107527888361,77.7990822090249,47.2029780238795,77.2674279971006,158.608143706744,186.877622464478,470.793930014879,33.5011001769242,36.1879063794359,57.8445442358754,33.8681890529859,70.3170354184936,96.7707909012656,250.966395591788,293.043618025117,463.606328721531,112.184794539326,218.349403052528,59.4518979871603,200.60250989385,210.568713246474,121.668216176956,56.10392463887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35.4241876720206,141.370705105726 | |||
|short_description=p1@UBE2S | |||
}} |
Latest revision as of 01:41, 20 September 2015
Short description: | p1@UBE2S |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBE2S_5end |
Coexpression cluster: | NA |
Association with transcript: | 161bp_to_ENST00000264552, NM_014501, uc002qkx.1_5end |
EntrezGene: | UBE2S |
HGNC: | 17895 |
UniProt: | Q16763 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.35e-18 | 253 |
embryonic cell | 1.77e-17 | 250 |
mesodermal cell | 1.33e-12 | 121 |
migratory neural crest cell | 3.39e-08 | 41 |
squamous epithelial cell | 4.40e-08 | 63 |
epithelial cell of nephron | 1.67e-07 | 15 |
neurectodermal cell | 4.95e-07 | 59 |
kidney cell | 4.99e-07 | 17 |
kidney epithelial cell | 4.99e-07 | 17 |
electrically responsive cell | 7.73e-07 | 61 |
electrically active cell | 7.73e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 9.90e-08 | 148 |
epithelial vesicle | 1.21e-07 | 78 |
cortex | 1.43e-07 | 15 |
epithelial tube | 1.53e-07 | 117 |
nephron epithelium | 1.67e-07 | 15 |
renal tubule | 1.67e-07 | 15 |
nephron tubule | 1.67e-07 | 15 |
nephron | 1.67e-07 | 15 |
uriniferous tubule | 1.67e-07 | 15 |
nephrogenic mesenchyme | 1.67e-07 | 15 |
parenchyma | 3.88e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.77e-29 | 235 |
disease of cellular proliferation | 4.08e-28 | 239 |
organ system cancer | 2.06e-17 | 137 |
cell type cancer | 1.86e-14 | 143 |
hematologic cancer | 6.83e-11 | 51 |
immune system cancer | 6.83e-11 | 51 |
carcinoma | 2.20e-10 | 106 |
leukemia | 4.22e-09 | 39 |