FFCP PHASE1:Hg19::chr1:204839218..204839235,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23114 | |EntrezGene=23114 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29866 | |HGNC=29866 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-496bp_to_ENST00000493914_5end | |association_with_transcript=-496bp_to_ENST00000493914_5end | ||
|cluster_id=chr1:204839218..204839235,+ | |||
|coexpression_cluster_id=C418 | |||
|description=CAGE_peak_4_at_NFASC_5end | |description=CAGE_peak_4_at_NFASC_5end | ||
|id=chr1:204839218..204839235,+ | |id=chr1:204839218..204839235,+ | ||
|ontology_enrichment_celltype=CL:0000136!5.50e-09!15;CL:0002541!8.65e-07!3 | |ontology_enrichment_celltype=CL:0000136!5.50e-09!15;CL:0002541!8.65e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002615;5.14e-11;3!CL:0002541;1.32e-10;3!CL:0000136;1.92e-09;13!CL:0002616;4.02e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,5.98e-11,3;CL:0002541,1.14e-10,3;CL:0002616,4.19e-09,1;CL:0000136,3.33e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.88e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.83e-30!115;UBERON:0004457!2.18e-09!12;UBERON:0000042!2.18e-09!12;UBERON:0003688!1.56e-08!6;UBERON:0002358!1.56e-08!6;UBERON:0003684!1.56e-08!6;UBERON:0001178!1.56e-08!6;UBERON:0000062!3.28e-08!511;UBERON:0000162!4.43e-07!14;UBERON:0001353!4.43e-07!14;UBERON:0000163!4.43e-07!14;UBERON:0006866!4.43e-07!14;UBERON:0000164!4.43e-07!14;UBERON:0000931!4.43e-07!14;UBERON:0000476!8.65e-07!3;UBERON:0000920!8.65e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!1.83e-30!115;UBERON:0004457!2.18e-09!12;UBERON:0000042!2.18e-09!12;UBERON:0003688!1.56e-08!6;UBERON:0002358!1.56e-08!6;UBERON:0003684!1.56e-08!6;UBERON:0001178!1.56e-08!6;UBERON:0000062!3.28e-08!511;UBERON:0000162!4.43e-07!14;UBERON:0001353!4.43e-07!14;UBERON:0000163!4.43e-07!14;UBERON:0006866!4.43e-07!14;UBERON:0000164!4.43e-07!14;UBERON:0000931!4.43e-07!14;UBERON:0000476!8.65e-07!3;UBERON:0000920!8.65e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.86e-12;6!UBERON:0002358;9.86e-12;6!UBERON:0003684;9.86e-12;6!UBERON:0001178;9.86e-12;6!UBERON:0003124;1.32e-10;3!UBERON:0000920;1.32e-10;3!UBERON:0000996;4.88e-09;1!UBERON:0002134;4.88e-09;1!UBERON:0005208;4.88e-09;1!UBERON:0004145;4.88e-09;1!UBERON:0005946;4.88e-09;1!UBERON:0005965;4.88e-09;1!UBERON:0002078;4.88e-09;1!UBERON:0007195;6.90e-09;1!UBERON:0004457;5.52e-08;9!UBERON:0000042;5.52e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.32e-11,6;UBERON:0002358,1.32e-11,6;UBERON:0003684,1.32e-11,6;UBERON:0001178,1.32e-11,6;UBERON:0000920,1.14e-10,3;UBERON:0003124,4.34e-10,7;UBERON:0004457,4.55e-10,12;UBERON:0000042,4.55e-10,12;UBERON:0002134,4.52e-09,1;UBERON:0005208,4.52e-09,1;UBERON:0005946,4.52e-09,1;UBERON:0005965,4.52e-09,1;UBERON:0002078,4.52e-09,1;UBERON:0000996,4.89e-09,1;UBERON:0007195,7.75e-09,1;UBERON:0004923,8.68e-08,66 | |||
|phase1_expression=0.363356758541113,1.49870366723688,2.11431606143957,0,2.23480547213644,6.10636966870258,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0,1.00267582127178,0,0,0,0,0,0,2.48860243445654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0.423863802319124,0,0,0,0,0,0,0,0.276149695926898,1.13152239773168,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,0,0,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0.841980283299221,0.640695746278505,1.02341449813341,0.64341568457443,0,0,0,0,0,0,0,0,0,1.03333003348146,0.182091168006717,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,2.22273980289274,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,1.27600463892768,1.37396390102793,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.442287822516696,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0.451961481561065,0,0,0.253243183823515,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,3.58936512288407,0.199679000498991,0.429226048136571,0.223171457441873,0.53746777989381,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,9.22026775400619,6.39945975246977,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0.439656701034247,0,0.129282956361551,0,0,0,0.640724475406168,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0.110929051536852,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5809017561964,0.256916900385838,0,0,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,2.55715116387475,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,3.10458295569236,0,0,0.611727596791485,0.131545547125698,0,0,0.39246546425257,0,0,0,0,0,8.36275566866879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,1.08043821351123,0.437119121007915,0,0.245148321753905,0,0,0,0,0,0.563903507879121,2.38494185502236,0,0,0,0,0.730336388246517,0,0,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0.318235791390825,0.404234377916439,0,0,0.0673520530145875,0.358611026963382,0,0,0,0,0,0,0.488965776731466,0,3.32878387092756,0.603821380773079,0 | |phase1_expression=0.363356758541113,1.49870366723688,2.11431606143957,0,2.23480547213644,6.10636966870258,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,0,1.00267582127178,0,0,0,0,0,0,2.48860243445654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0.423863802319124,0,0,0,0,0,0,0,0.276149695926898,1.13152239773168,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,0,0,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0.841980283299221,0.640695746278505,1.02341449813341,0.64341568457443,0,0,0,0,0,0,0,0,0,1.03333003348146,0.182091168006717,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,2.22273980289274,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,1.27600463892768,1.37396390102793,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.442287822516696,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0.451961481561065,0,0,0.253243183823515,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,3.58936512288407,0.199679000498991,0.429226048136571,0.223171457441873,0.53746777989381,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,9.22026775400619,6.39945975246977,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0.439656701034247,0,0.129282956361551,0,0,0,0.640724475406168,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0.110929051536852,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5809017561964,0.256916900385838,0,0,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,2.55715116387475,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,3.10458295569236,0,0,0.611727596791485,0.131545547125698,0,0,0.39246546425257,0,0,0,0,0,8.36275566866879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,1.08043821351123,0.437119121007915,0,0.245148321753905,0,0,0,0,0,0.563903507879121,2.38494185502236,0,0,0,0,0.730336388246517,0,0,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0.318235791390825,0.404234377916439,0,0,0.0673520530145875,0.358611026963382,0,0,0,0,0,0,0.488965776731466,0,3.32878387092756,0.603821380773079,0 | ||
|short_description=p4@NFASC | |short_description=p4@NFASC | ||
}} | }} |
Latest revision as of 01:51, 20 September 2015
Short description: | p4@NFASC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NFASC_5end |
Coexpression cluster: | C418_normal_Melanocyte_Hep2_cervical_umbilical_osteosarcoma_gall |
Association with transcript: | -496bp_to_ENST00000493914_5end |
EntrezGene: | NFASC |
HGNC: | 29866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 5.98e-11 | 3 |
chorionic membrane mesenchymal stem cell | 1.14e-10 | 3 |
perirenal adipocyte cell | 4.19e-09 | 1 |
fat cell | 3.33e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.32e-11 | 6 |
peritoneum | 1.32e-11 | 6 |
abdominal cavity | 1.32e-11 | 6 |
visceral peritoneum | 1.32e-11 | 6 |
egg chorion | 1.14e-10 | 3 |
chorion | 4.34e-10 | 7 |
cavity lining | 4.55e-10 | 12 |
serous membrane | 4.55e-10 | 12 |
tricuspid valve | 4.52e-09 | 1 |
right atrium valve | 4.52e-09 | 1 |
outflow tract of atrium | 4.52e-09 | 1 |
outflow part of right atrium | 4.52e-09 | 1 |
right cardiac atrium | 4.52e-09 | 1 |
vagina | 4.89e-09 | 1 |
stroma of bone marrow | 7.75e-09 | 1 |
organ component layer | 8.68e-08 | 66 |