FFCP PHASE1:Hg19::chr10:95517748..95517790,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9211 | |EntrezGene=9211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6572 | |HGNC=6572 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=65bp_to_uc001kje.2,uc009xui.2_5end | |association_with_transcript=65bp_to_uc001kje.2,uc009xui.2_5end | ||
|cluster_id=chr10:95517748..95517790,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_3_at_LGI1_5end | |description=CAGE_peak_3_at_LGI1_5end | ||
|id=chr10:95517748..95517790,+ | |id=chr10:95517748..95517790,+ | ||
|ontology_enrichment_celltype=CL:0002322!3.40e-09!5 | |ontology_enrichment_celltype=CL:0002322!3.40e-09!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.70e-21;82!UBERON:0006215;2.70e-10;3!UBERON:0006241;2.84e-09;3!UBERON:0003057;2.84e-09;3!UBERON:0010122;8.26e-08;2!UBERON:0002532;1.68e-07;206!UBERON:0010316;1.68e-07;206 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.29e-74!57;UBERON:0005068!1.29e-74!57;UBERON:0006241!1.29e-74!57;UBERON:0007135!1.29e-74!57;UBERON:0002616!6.81e-68!59;UBERON:0005743!3.01e-66!86;UBERON:0001017!3.54e-65!82;UBERON:0000073!9.83e-65!94;UBERON:0001016!9.83e-65!94;UBERON:0000955!3.56e-63!69;UBERON:0006238!3.56e-63!69;UBERON:0003075!3.16e-59!86;UBERON:0007284!3.16e-59!86;UBERON:0002780!5.98e-59!41;UBERON:0001890!5.98e-59!41;UBERON:0006240!5.98e-59!41;UBERON:0003080!2.76e-57!42;UBERON:0002346!7.64e-56!90;UBERON:0001893!1.46e-50!34;UBERON:0002020!1.59e-50!34;UBERON:0003528!1.59e-50!34;UBERON:0007023!4.46e-49!115;UBERON:0002791!1.03e-48!33;UBERON:0001869!2.27e-47!32;UBERON:0003056!1.64e-44!61;UBERON:0002619!9.18e-40!22;UBERON:0000153!1.03e-39!129;UBERON:0007811!1.03e-39!129;UBERON:0000033!2.87e-39!123;UBERON:0001950!4.59e-36!20;UBERON:0004121!1.77e-34!169;UBERON:0000956!2.56e-34!25;UBERON:0000203!2.56e-34!25;UBERON:0000924!2.99e-33!173;UBERON:0006601!2.99e-33!173;UBERON:0002420!8.02e-18!9;UBERON:0007245!8.02e-18!9;UBERON:0010009!8.02e-18!9;UBERON:0010011!8.02e-18!9;UBERON:0000454!8.02e-18!9;UBERON:0002308!1.10e-17!9;UBERON:0000125!1.10e-17!9;UBERON:0003076!1.25e-17!15;UBERON:0003057!1.25e-17!15;UBERON:0009663!2.46e-14!7;UBERON:0000025!4.40e-13!194;UBERON:0000200!5.90e-13!6;UBERON:0004733!5.98e-13!12;UBERON:0002028!5.98e-13!12;UBERON:0007277!5.98e-13!12;UBERON:0001871!3.12e-12!7;UBERON:0002298!5.08e-12!8;UBERON:0004732!8.73e-12!13;UBERON:0000475!3.08e-11!365;UBERON:0002021!7.88e-11!5;UBERON:0001872!9.61e-11!5;UBERON:0000349!1.24e-10!5;UBERON:0000064!1.09e-09!219;UBERON:0001894!1.30e-09!7;UBERON:0006222!1.30e-09!7;UBERON:0000369!1.76e-09!4;UBERON:0002435!1.76e-09!4;UBERON:0000204!1.76e-09!4;UBERON:0010082!1.76e-09!4;UBERON:0004111!5.13e-09!241;UBERON:0000062!8.18e-09!511;UBERON:0000483!1.16e-08!309;UBERON:0000481!1.89e-08!347;UBERON:0000119!1.95e-08!312;UBERON:0000477!2.49e-08!286;UBERON:0000922!4.01e-08!612;UBERON:0002680!4.66e-08!9;UBERON:0001895!4.66e-08!9;UBERON:0010092!4.66e-08!9;UBERON:0005383!1.19e-07!3;UBERON:0005382!1.19e-07!3;UBERON:0002771!1.69e-07!3;UBERON:0000468!3.26e-07!659;UBERON:0001896!4.32e-07!3;UBERON:0005290!4.32e-07!3;UBERON:0010096!4.32e-07!3;UBERON:0000988!4.87e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.29e-74!57;UBERON:0005068!1.29e-74!57;UBERON:0006241!1.29e-74!57;UBERON:0007135!1.29e-74!57;UBERON:0002616!6.81e-68!59;UBERON:0005743!3.01e-66!86;UBERON:0001017!3.54e-65!82;UBERON:0000073!9.83e-65!94;UBERON:0001016!9.83e-65!94;UBERON:0000955!3.56e-63!69;UBERON:0006238!3.56e-63!69;UBERON:0003075!3.16e-59!86;UBERON:0007284!3.16e-59!86;UBERON:0002780!5.98e-59!41;UBERON:0001890!5.98e-59!41;UBERON:0006240!5.98e-59!41;UBERON:0003080!2.76e-57!42;UBERON:0002346!7.64e-56!90;UBERON:0001893!1.46e-50!34;UBERON:0002020!1.59e-50!34;UBERON:0003528!1.59e-50!34;UBERON:0007023!4.46e-49!115;UBERON:0002791!1.03e-48!33;UBERON:0001869!2.27e-47!32;UBERON:0003056!1.64e-44!61;UBERON:0002619!9.18e-40!22;UBERON:0000153!1.03e-39!129;UBERON:0007811!1.03e-39!129;UBERON:0000033!2.87e-39!123;UBERON:0001950!4.59e-36!20;UBERON:0004121!1.77e-34!169;UBERON:0000956!2.56e-34!25;UBERON:0000203!2.56e-34!25;UBERON:0000924!2.99e-33!173;UBERON:0006601!2.99e-33!173;UBERON:0002420!8.02e-18!9;UBERON:0007245!8.02e-18!9;UBERON:0010009!8.02e-18!9;UBERON:0010011!8.02e-18!9;UBERON:0000454!8.02e-18!9;UBERON:0002308!1.10e-17!9;UBERON:0000125!1.10e-17!9;UBERON:0003076!1.25e-17!15;UBERON:0003057!1.25e-17!15;UBERON:0009663!2.46e-14!7;UBERON:0000025!4.40e-13!194;UBERON:0000200!5.90e-13!6;UBERON:0004733!5.98e-13!12;UBERON:0002028!5.98e-13!12;UBERON:0007277!5.98e-13!12;UBERON:0001871!3.12e-12!7;UBERON:0002298!5.08e-12!8;UBERON:0004732!8.73e-12!13;UBERON:0000475!3.08e-11!365;UBERON:0002021!7.88e-11!5;UBERON:0001872!9.61e-11!5;UBERON:0000349!1.24e-10!5;UBERON:0000064!1.09e-09!219;UBERON:0001894!1.30e-09!7;UBERON:0006222!1.30e-09!7;UBERON:0000369!1.76e-09!4;UBERON:0002435!1.76e-09!4;UBERON:0000204!1.76e-09!4;UBERON:0010082!1.76e-09!4;UBERON:0004111!5.13e-09!241;UBERON:0000062!8.18e-09!511;UBERON:0000483!1.16e-08!309;UBERON:0000481!1.89e-08!347;UBERON:0000119!1.95e-08!312;UBERON:0000477!2.49e-08!286;UBERON:0000922!4.01e-08!612;UBERON:0002680!4.66e-08!9;UBERON:0001895!4.66e-08!9;UBERON:0010092!4.66e-08!9;UBERON:0005383!1.19e-07!3;UBERON:0005382!1.19e-07!3;UBERON:0002771!1.69e-07!3;UBERON:0000468!3.26e-07!659;UBERON:0001896!4.32e-07!3;UBERON:0005290!4.32e-07!3;UBERON:0010096!4.32e-07!3;UBERON:0000988!4.87e-07!3 | ||
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|short_description=p3@LGI1 | |short_description=p3@LGI1 | ||
}} | }} |
Latest revision as of 01:51, 20 September 2015
Short description: | p3@LGI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LGI1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 65bp_to_uc001kje.2, uc009xui.2_5end |
EntrezGene: | LGI1 |
HGNC: | 6572 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data