FFCP PHASE1:Hg19::chr14:50234309..50234330,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23588 | |EntrezGene=23588 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20231 | |HGNC=20231 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2U9 | |UniProt=Q9Y2U9 | ||
|association_with_transcript=0bp_to_ENST00000298307_5end | |association_with_transcript=0bp_to_ENST00000298307_5end | ||
|cluster_id=chr14:50234309..50234330,+ | |||
|description=CAGE_peak_5_at_KLHDC2_5end | |description=CAGE_peak_5_at_KLHDC2_5end | ||
|id=chr14:50234309..50234330,+ | |id=chr14:50234309..50234330,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.73e-08;18!CL:0000789;1.73e-08;18!CL:0002419;1.73e-08;18!CL:0000084;5.84e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.76e-08,18;CL:0000789,1.76e-08,18;CL:0002420,1.76e-08,18;CL:0002419,1.76e-08,18;CL:0000790,1.76e-08,18;CL:0000084,7.59e-07,25;CL:0000827,7.59e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.73e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.08e-15!82;UBERON:0001049!8.01e-14!57;UBERON:0005068!8.01e-14!57;UBERON:0006241!8.01e-14!57;UBERON:0007135!8.01e-14!57;UBERON:0005743!1.47e-13!86;UBERON:0002616!5.88e-13!59;UBERON:0000955!1.01e-12!69;UBERON:0006238!1.01e-12!69;UBERON:0002020!1.04e-12!34;UBERON:0003528!1.04e-12!34;UBERON:0000073!1.50e-12!94;UBERON:0001016!1.50e-12!94;UBERON:0001869!1.56e-12!32;UBERON:0001893!1.74e-12!34;UBERON:0003080!4.61e-12!42;UBERON:0002791!7.14e-12!33;UBERON:0002780!9.63e-12!41;UBERON:0001890!9.63e-12!41;UBERON:0006240!9.63e-12!41;UBERON:0007023!2.39e-11!115;UBERON:0000956!4.70e-11!25;UBERON:0000203!4.70e-11!25;UBERON:0002619!1.56e-10!22;UBERON:0001950!8.33e-10!20;UBERON:0002346!8.58e-08!90;UBERON:0003075!1.53e-07!86;UBERON:0007284!1.53e-07!86;UBERON:0000153!4.33e-07!129;UBERON:0007811!4.33e-07!129 | |ontology_enrichment_uberon=UBERON:0001017!6.08e-15!82;UBERON:0001049!8.01e-14!57;UBERON:0005068!8.01e-14!57;UBERON:0006241!8.01e-14!57;UBERON:0007135!8.01e-14!57;UBERON:0005743!1.47e-13!86;UBERON:0002616!5.88e-13!59;UBERON:0000955!1.01e-12!69;UBERON:0006238!1.01e-12!69;UBERON:0002020!1.04e-12!34;UBERON:0003528!1.04e-12!34;UBERON:0000073!1.50e-12!94;UBERON:0001016!1.50e-12!94;UBERON:0001869!1.56e-12!32;UBERON:0001893!1.74e-12!34;UBERON:0003080!4.61e-12!42;UBERON:0002791!7.14e-12!33;UBERON:0002780!9.63e-12!41;UBERON:0001890!9.63e-12!41;UBERON:0006240!9.63e-12!41;UBERON:0007023!2.39e-11!115;UBERON:0000956!4.70e-11!25;UBERON:0000203!4.70e-11!25;UBERON:0002619!1.56e-10!22;UBERON:0001950!8.33e-10!20;UBERON:0002346!8.58e-08!90;UBERON:0003075!1.53e-07!86;UBERON:0007284!1.53e-07!86;UBERON:0000153!4.33e-07!129;UBERON:0007811!4.33e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.07e-21;20!UBERON:0002619;3.46e-19;22!UBERON:0000956;1.69e-16;25!UBERON:0000203;1.69e-16;25!UBERON:0001869;2.21e-15;32!UBERON:0001893;2.62e-14;34!UBERON:0002791;1.31e-13;32!UBERON:0003528;1.71e-12;34!UBERON:0002020;1.71e-12;34!UBERON:0002780;2.66e-11;41!UBERON:0001890;2.66e-11;41!UBERON:0000073;4.22e-10;53!UBERON:0002616;4.22e-10;53!UBERON:0001017;5.77e-10;75!UBERON:0000200;6.01e-10;6!UBERON:0000955;3.09e-09;68!UBERON:0002021;3.05e-08;5!UBERON:0001872;6.79e-08;5!UBERON:0001016;2.65e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,8.54e-22,20;UBERON:0001017,4.96e-20,81;UBERON:0002619,1.56e-19,22;UBERON:0001049,1.38e-18,56;UBERON:0005068,1.38e-18,56;UBERON:0006241,1.38e-18,56;UBERON:0007135,1.38e-18,56;UBERON:0001869,2.04e-18,32;UBERON:0001016,3.57e-17,89;UBERON:0001893,4.50e-17,34;UBERON:0000955,4.53e-17,68;UBERON:0006238,4.53e-17,68;UBERON:0002780,5.35e-17,41;UBERON:0001890,5.35e-17,41;UBERON:0003080,5.35e-17,41;UBERON:0006240,5.35e-17,41;UBERON:0000956,8.43e-17,25;UBERON:0000203,8.43e-17,25;UBERON:0000073,1.19e-16,53;UBERON:0002616,1.19e-16,53;UBERON:0002791,3.91e-16,32;UBERON:0003528,6.05e-15,34;UBERON:0002020,6.05e-15,34;UBERON:0003075,1.30e-10,82;UBERON:0007284,1.30e-10,82;UBERON:0002346,7.94e-10,86;UBERON:0000200,8.96e-10,6;UBERON:0003056,9.11e-10,61;UBERON:0010371,1.17e-08,104;UBERON:0010314,3.01e-08,132;UBERON:0004121,3.82e-08,171;UBERON:0000924,3.82e-08,171;UBERON:0006601,3.82e-08,171;UBERON:0001872,4.10e-08,5;UBERON:0002021,5.99e-08,5 | |||
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|phase1_expression=0.363356758541113,0.642301571672949,0.563817616383885,0,1.34088328328186,0,0,0,1.04474251279935,0.245733936501509,0,0.218441372130172,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,0.369363174230364,0.204000691244253,0.313454721478088,0.286235987131057,0.821246550437305,0.87879847716362,0,0.0821005894499457,0,0,0,0.77408061658038,0.919421224478927,0,0,0.232401601740905,0,0.880801318004542,0,0.601633342410425,0,0.223915474239924,0.647787332037959,0.257575567634187,0.290796477559129,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0.587237189370939,1.52909291250092,0,1.12101712596307,0.526768169550154,2.16380747125216,1.57204305099666,1.02800749499755,0.668745981562712,0.651844533267181,1.4203434172042,0,0.891283655081389,0.589211814949674,0,0.270803863765016,1.15282187753108,1.1705341280389,0.822189523018381,1.38175008892924,1.15921234294021,2.52087157375503,2.94294910898684,0,0.339928028092699,2.29932296161153,0.34362744548263,0.759059076058509,1.27426165729639,0,0.950452044448374,0.602300476311091,0.255973222308837,0,0.236777252044017,1.64225599384209,1.00803371612366,1.60464117470104,1.15859523106239,2.43806866313962,0.670700859703636,0.12786256184353,0.722878304769133,0.50133791063589,0.144846518960824,0.795285947051099,0.973269740605272,0.472674085820339,0,0.43917392846563,0.785874452986276,0,0,0.324547393654683,0.348259474598534,0.398873881556595,0,0,0.371457501329565,0.198762407366705,0,1.04142150482278,1.13061588384802,0,0,0,0.516833518338658,0,0.66944122552934,1.20848795132744,0,0,0,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0.949265659568129,0.549605231791222,0,0,0.436094052142534,0,0.379891534993739,0.662045904066094,1.14734648299525,0.354668382198357,1.12135520028461,2.1349799145941,0.49333509683432,0.311211035399766,0.67355336034844,0.817309515567294,0.454072282934794,0.576175924479999,0,0,1.1409436430889,0.149448680551801,0.23486899728753,0,0.280901613404497,0,0,0.206651562351531,1.18800285728205,0.494533858557114,0,0.718618141816238,0,0.250237039743928,0,0,0.919463387397059,0.45071417671979,0.113432183160021,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,1.0126579934476,0.0974370051611986,0.504867548488229,0.276149695926898,0,0,0.10075209822764,0,0.57978255948989,0.818238361772504,0.286804595389004,0,0.397589304964456,0.116193942869518,0.10366105501537,0,0.36497735907583,1.56449532329816,0.643240938192885,0,0,0.721879481669586,0.118306800039844,0,0.482022059766964,0,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,2.53510069643662,0,0,1.32438929824395,0.368965315629341,0,0.109750285408626,1.1240175325762,0.301586917234893,0,0,0,0,0.231860809950154,0.469634776943287,0.433099343283221,0,0.570762456703795,0.790204397959275,0,0.492434012174795,0.234004265139238,0,0.93733833986777,0,0.283550194484773,0.179117045405697,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0,0.25248486685276,0.126995788584338,0.763976851116555,0,0,0.205654985406647,0.600686115687835,0.285826432630578,0,0,0.07333828582095,0.517086863031111,0,0.845302752556,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0,2.10833939483032,0.718874566474748,1.14861935834114,0,0,0.410952645100767,0.358121926479791,0,0.985153801009636,1.72502059887614,1.02674429023799,0.76228387266739,1.30139853857622,0.773288812777695,1.67516265334349,3.18969375826582,0,0,0,0.24538298343828,0,0,0.831883446123229,0.178428988797162,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0.368738337083406,0,0,0,0.620304078368662,0.647142602455851,0.106727557803444,0,0,0.604780586659361,0.744323423456331,0.460385919864187,0.841980283299221,1.53766979106841,1.02341449813341,0.321707842287215,1.48418066444991,0.154209693802656,0.177561725313127,0.328508624055237,0,0.116210378459959,1.0877350463246,0,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0,0,0.340187410553031,0.431831832204279,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0.219259876645935,0.522870902049801,0,0,0,0.515205058238611,0.366277859273374,0,0,0,0,0.48335359146061,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.170453254832202,0.0890320356467374,0.165284915360978,0.768760269460425,0.382838137483752,0.2023155617111,0,0,1.3940745403212,0,0.532306030317022,0,0.55597265731176,0.572499546967965,0.372158369359667,0,0.762520775695299,0,0.42793898803392,0,0,0.179872457583315,0,0.235624804691373,0.404364963146632,1.58510321173008,0,0,0,1.05650146756755,0,0.424216295861138,0,1.10273068709225,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0.563391205064483,0.14341135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| ||
|short_description=p5@KLHDC2 | |short_description=p5@KLHDC2 | ||
}} | }} |
Latest revision as of 02:22, 20 September 2015
Short description: | p5@KLHDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KLHDC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000298307_5end |
EntrezGene: | KLHDC2 |
HGNC: | 20231 |
UniProt: | Q9Y2U9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.76e-08 | 18 |
alpha-beta T cell | 1.76e-08 | 18 |
immature T cell | 1.76e-08 | 18 |
mature T cell | 1.76e-08 | 18 |
immature alpha-beta T cell | 1.76e-08 | 18 |
T cell | 7.59e-07 | 25 |
pro-T cell | 7.59e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
neocortex | 8.54e-22 | 20 |
central nervous system | 4.96e-20 | 81 |
regional part of cerebral cortex | 1.56e-19 | 22 |
neural tube | 1.38e-18 | 56 |
neural rod | 1.38e-18 | 56 |
future spinal cord | 1.38e-18 | 56 |
neural keel | 1.38e-18 | 56 |
cerebral hemisphere | 2.04e-18 | 32 |
nervous system | 3.57e-17 | 89 |
telencephalon | 4.50e-17 | 34 |
brain | 4.53e-17 | 68 |
future brain | 4.53e-17 | 68 |
regional part of forebrain | 5.35e-17 | 41 |
forebrain | 5.35e-17 | 41 |
anterior neural tube | 5.35e-17 | 41 |
future forebrain | 5.35e-17 | 41 |
cerebral cortex | 8.43e-17 | 25 |
pallium | 8.43e-17 | 25 |
regional part of nervous system | 1.19e-16 | 53 |
regional part of brain | 1.19e-16 | 53 |
regional part of telencephalon | 3.91e-16 | 32 |
brain grey matter | 6.05e-15 | 34 |
gray matter | 6.05e-15 | 34 |
neural plate | 1.30e-10 | 82 |
presumptive neural plate | 1.30e-10 | 82 |
neurectoderm | 7.94e-10 | 86 |
gyrus | 8.96e-10 | 6 |
pre-chordal neural plate | 9.11e-10 | 61 |
ecto-epithelium | 1.17e-08 | 104 |
structure with developmental contribution from neural crest | 3.01e-08 | 132 |
ectoderm-derived structure | 3.82e-08 | 171 |
ectoderm | 3.82e-08 | 171 |
presumptive ectoderm | 3.82e-08 | 171 |
parietal lobe | 4.10e-08 | 5 |
occipital lobe | 5.99e-08 | 5 |