FFCP PHASE1:Hg19::chr4:101439078..101439098,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51705 | |EntrezGene=51705 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16041 | |HGNC=16041 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_ENST00000502744_5end | |association_with_transcript=56bp_to_ENST00000502744_5end | ||
|cluster_id=chr4:101439078..101439098,- | |||
|coexpression_cluster_id=C856 | |coexpression_cluster_id=C856 | ||
|description=CAGE_peak_3_at_EMCN_5end | |description=CAGE_peak_3_at_EMCN_5end | ||
|id=chr4:101439078..101439098,- | |id=chr4:101439078..101439098,- | ||
|ontology_enrichment_celltype=CL:0002139!1.81e-21!24;CL:0000071!4.67e-15!18;CL:0002546!4.67e-15!18;CL:0000115!5.86e-15!35;CL:0002078!3.50e-10!44;CL:1000413!6.72e-09!9;CL:0005020!4.08e-08!6;CL:0002138!4.08e-08!6;CL:0005022!4.08e-08!6;CL:0002544!6.66e-07!6 | |ontology_enrichment_celltype=CL:0002139!1.81e-21!24;CL:0000071!4.67e-15!18;CL:0002546!4.67e-15!18;CL:0000115!5.86e-15!35;CL:0002078!3.50e-10!44;CL:1000413!6.72e-09!9;CL:0005020!4.08e-08!6;CL:0002138!4.08e-08!6;CL:0005022!4.08e-08!6;CL:0002544!6.66e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.39e-25;24!CL:0000071;9.45e-16;18!CL:0000115;1.91e-14;36!CL:0002138;2.47e-11;6!CL:0002078;1.72e-09;45!CL:1000413;3.54e-08;9!CL:0002544;3.34e-07;6!CL:0002618;9.74e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.31e-25,24;CL:0000115,5.35e-18,36;CL:0000071,9.81e-16,18;CL:0002546,9.81e-16,18;CL:0002078,4.32e-13,45;CL:0005020,2.31e-11,6;CL:0002138,2.31e-11,6;CL:0005022,2.31e-11,6;CL:0000213,8.52e-09,58;CL:0000215,8.52e-09,58;CL:1000413,3.55e-08,9;CL:0002544,3.35e-07,6;CL:0002618,9.77e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;9.45e-16;18!CL:0005022;2.47e-11;6!UBERON:0006603;2.32e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;9.45e-16;18!UBERON:0001986;9.45e-16;18!UBERON:0004852;9.45e-16;18!UBERON:0000487;3.45e-12;22!UBERON:0007023;2.41e-10;114!UBERON:0006914;2.78e-10;25!UBERON:0001473;3.08e-08;8!UBERON:0004536;3.08e-08;8!UBERON:0006558;3.08e-08;8!UBERON:0002465;3.11e-08;10!UBERON:0003915;3.54e-08;9!UBERON:0004700;3.54e-08;9!UBERON:0001917;3.54e-08;9!UBERON:0001894;2.47e-07;7!UBERON:0000922;2.64e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.19e-38,114;UBERON:0004638,9.81e-16,18;UBERON:0001986,9.81e-16,18;UBERON:0004852,9.81e-16,18;UBERON:0000487,3.55e-12,22;UBERON:0004111,3.93e-12,240;UBERON:0000055,1.87e-10,68;UBERON:0006914,2.85e-10,25;UBERON:0001473,2.93e-08,8;UBERON:0004536,2.93e-08,8;UBERON:0006558,2.93e-08,8;UBERON:0002465,2.99e-08,10;UBERON:0002049,3.16e-08,78;UBERON:0007798,3.16e-08,78;UBERON:0003915,3.55e-08,9;UBERON:0004700,3.55e-08,9;UBERON:0001917,3.55e-08,9;UBERON:0000025,7.30e-08,192;UBERON:0001894,2.67e-07,7;UBERON:0006222,2.67e-07,7;UBERON:0001009,2.67e-07,112;UBERON:0003103,8.66e-07,68 | |||
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| ||
|short_description=p3@EMCN | |short_description=p3@EMCN | ||
}} | }} |
Latest revision as of 02:46, 20 September 2015
Short description: | p3@EMCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EMCN_5end |
Coexpression cluster: | C856_Endothelial_lung_diaphragm_left_kidney_heart_Hepatic |
Association with transcript: | 56bp_to_ENST00000502744_5end |
EntrezGene: | EMCN |
HGNC: | 16041 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.31e-25 | 24 |
endothelial cell | 5.35e-18 | 36 |
blood vessel endothelial cell | 9.81e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.81e-16 | 18 |
meso-epithelial cell | 4.32e-13 | 45 |
lymphangioblast | 2.31e-11 | 6 |
endothelial cell of lymphatic vessel | 2.31e-11 | 6 |
vascular lymphangioblast | 2.31e-11 | 6 |
lining cell | 8.52e-09 | 58 |
barrier cell | 8.52e-09 | 58 |
endothelial cell of artery | 3.55e-08 | 9 |
aortic endothelial cell | 3.35e-07 | 6 |
endothelial cell of umbilical vein | 9.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.19e-38 | 114 |
blood vessel endothelium | 9.81e-16 | 18 |
endothelium | 9.81e-16 | 18 |
cardiovascular system endothelium | 9.81e-16 | 18 |
simple squamous epithelium | 3.55e-12 | 22 |
anatomical conduit | 3.93e-12 | 240 |
vessel | 1.87e-10 | 68 |
squamous epithelium | 2.85e-10 | 25 |
lymphatic vessel | 2.93e-08 | 8 |
lymph vasculature | 2.93e-08 | 8 |
lymphatic part of lymphoid system | 2.93e-08 | 8 |
lymphoid system | 2.99e-08 | 10 |
vasculature | 3.16e-08 | 78 |
vascular system | 3.16e-08 | 78 |
endothelial tube | 3.55e-08 | 9 |
arterial system endothelium | 3.55e-08 | 9 |
endothelium of artery | 3.55e-08 | 9 |
tube | 7.30e-08 | 192 |
diencephalon | 2.67e-07 | 7 |
future diencephalon | 2.67e-07 | 7 |
circulatory system | 2.67e-07 | 112 |
compound organ | 8.66e-07 | 68 |