FFCP PHASE1:Hg19::chrX:153602991..153603011,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:153602991..153603011,-
|short_description=p3@FLNA
|description=CAGE_peak_3_at_FLNA_5end
|association_with_transcript=0bp_to_ENST00000369850,ENST00000422373...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2316 | |EntrezGene=2316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3754 | |HGNC=3754 | ||
|TSSclassifier=strong | |||
|UniProt=P21333,E9KL45,Q60FE5,Q6NXF2,Q8TES4 | |UniProt=P21333,E9KL45,Q60FE5,Q6NXF2,Q8TES4 | ||
|association_with_transcript=0bp_to_ENST00000369850,ENST00000422373,NM_001110556,NM_001456,uc004fkk.2,uc010nuu.1_5end | |||
|cluster_id=chrX:153602991..153603011,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_3_at_FLNA_5end | |||
|id=chrX:153602991..153603011,- | |||
|ontology_enrichment_celltype=CL:0000055!6.04e-15!180;CL:0000192!3.44e-10!42;CL:0000514!3.44e-10!42;CL:0000183!7.56e-09!59;CL:0000359!9.61e-09!32;CL:0000187!2.54e-08!54;CL:0000680!3.96e-08!57;CL:0000056!3.96e-08!57;CL:0000355!3.96e-08!57;CL:0000222!1.11e-07!119;CL:0000393!2.44e-07!60;CL:0000211!2.44e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.86e-08;32!CL:0000192;1.01e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.66e-10,43;CL:0000514,2.66e-10,43;CL:0000359,9.08e-09,32;CL:0000187,1.91e-08,55;CL:0000680,2.98e-08,58;CL:0000056,2.98e-08,58;CL:0000355,2.98e-08,58;CL:0000222,9.12e-08,121;CL:0000393,1.84e-07,61;CL:0000211,1.84e-07,61;CL:0000057,4.07e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;1.01e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!9.41e-14!84;UBERON:0003914!1.12e-13!118;UBERON:0001009!1.15e-13!113;UBERON:0004535!3.38e-13!110;UBERON:0000468!4.96e-13!659;UBERON:0001981!7.58e-12!60;UBERON:0007500!7.58e-12!60;UBERON:0004537!7.58e-12!60;UBERON:0006965!7.58e-12!60;UBERON:0002049!1.16e-11!79;UBERON:0007798!1.16e-11!79;UBERON:0005256!3.07e-11!143;UBERON:0002100!3.96e-11!216;UBERON:0003104!6.36e-11!238;UBERON:0009142!6.36e-11!238;UBERON:0000055!8.49e-11!69;UBERON:0001637!1.43e-10!42;UBERON:0003509!1.43e-10!42;UBERON:0004572!1.43e-10!42;UBERON:0000467!8.34e-10!625;UBERON:0000480!1.10e-09!626;UBERON:0000475!2.33e-09!365;UBERON:0002385!3.96e-09!63;UBERON:0001015!3.96e-09!63;UBERON:0000383!3.96e-09!63;UBERON:0000481!8.35e-09!347;UBERON:0000490!1.00e-08!138;UBERON:0001134!2.88e-08!61;UBERON:0002036!2.88e-08!61;UBERON:0003082!2.88e-08!61;UBERON:0004573!4.70e-08!33;UBERON:0004571!4.70e-08!33;UBERON:0000926!1.01e-07!448;UBERON:0004120!1.01e-07!448;UBERON:0006603!1.01e-07!448;UBERON:0000477!1.15e-07!286;UBERON:0000914!2.36e-07!83;UBERON:0002329!2.36e-07!83;UBERON:0003077!2.36e-07!83;UBERON:0003059!2.36e-07!83;UBERON:0007282!2.36e-07!83;UBERON:0009618!2.36e-07!83;UBERON:0007285!2.36e-07!83;UBERON:0004290!2.61e-07!70;UBERON:0003103!3.11e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.18e-08;42!UBERON:0003509;6.18e-08;42!UBERON:0004572;6.18e-08;42!UBERON:0004573;2.21e-07;33!UBERON:0004571;2.21e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.32e-13,117;UBERON:0004872,2.68e-13,83;UBERON:0001009,2.99e-13,112;UBERON:0004535,8.73e-13,109;UBERON:0003104,4.50e-12,160;UBERON:0009142,4.50e-12,160;UBERON:0007500,2.28e-11,59;UBERON:0001981,2.28e-11,59;UBERON:0004537,2.28e-11,59;UBERON:0006965,2.28e-11,59;UBERON:0002049,3.16e-11,78;UBERON:0007798,3.16e-11,78;UBERON:0002100,4.43e-11,199;UBERON:0001637,1.33e-10,42;UBERON:0003509,1.33e-10,42;UBERON:0004572,1.33e-10,42;UBERON:0000055,2.36e-10,68;UBERON:0005256,5.07e-10,122;UBERON:0002385,2.94e-09,64;UBERON:0001015,2.94e-09,64;UBERON:0000383,2.94e-09,64;UBERON:0007503,1.06e-08,78;UBERON:0001134,2.16e-08,62;UBERON:0002036,2.16e-08,62;UBERON:0003082,2.16e-08,62;UBERON:0000490,2.85e-08,148;UBERON:0004573,4.46e-08,33;UBERON:0004571,4.46e-08,33;UBERON:0007524,9.07e-08,73;UBERON:0003077,1.69e-07,72;UBERON:0007285,1.69e-07,72;UBERON:0002329,1.97e-07,71;UBERON:0003059,1.97e-07,71;UBERON:0007282,1.97e-07,71;UBERON:0004290,1.97e-07,71;UBERON:0009618,1.97e-07,71;UBERON:0003103,3.76e-07,68 | |||
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| ||
|short_description=p3@FLNA | |||
}} | }} |
Latest revision as of 02:51, 20 September 2015
Short description: | p3@FLNA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FLNA_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 0bp_to_ENST00000369850, ENST00000422373, NM_001110556, NM_001456, uc004fkk.2, uc010nuu.1_5end |
EntrezGene: | FLNA |
HGNC: | 3754 |
UniProt: | P21333E9KL45Q60FE5Q6NXF2Q8TES4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.66e-10 | 43 |
smooth muscle myoblast | 2.66e-10 | 43 |
vascular associated smooth muscle cell | 9.08e-09 | 32 |
muscle cell | 1.91e-08 | 55 |
muscle precursor cell | 2.98e-08 | 58 |
myoblast | 2.98e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.98e-08 | 58 |
mesodermal cell | 9.12e-08 | 121 |
electrically responsive cell | 1.84e-07 | 61 |
electrically active cell | 1.84e-07 | 61 |
fibroblast | 4.07e-07 | 76 |