FFCP PHASE1:Hg19::chr19:56368793..56368800,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147945 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22943 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_uc002qmf.2_5end | |||
|cluster_id=chr19:56368793..56368800,+ | |||
|coexpression_cluster_id=C62 | |||
|description=CAGE_peak_2_at_NLRP4_5end | |||
|id=chr19:56368793..56368800,+ | |||
|ontology_enrichment_celltype=CL:0000946!9.92e-13!1;CL:0000786!9.92e-13!1;CL:0000980!9.92e-13!1;CL:0000785!5.41e-07!2;CL:0000955!5.41e-07!2;CL:0000818!5.41e-07!2;CL:0000954!5.41e-07!2;CL:0000816!5.41e-07!2;CL:0002195!7.20e-07!2;CL:0002571!7.20e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.01e-09;24!CL:0000542;2.32e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.01e-09,24;CL:0000826,1.01e-09,24 | |||
|ontology_enrichment_development_v019=CL:0000051;2.32e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!9.54e-11!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.81e-21;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.81e-21,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.65e-15!3;UBERON:0004854!1.65e-15!3;UBERON:0009034!1.65e-15!3;UBERON:0002095!1.65e-15!3;UBERON:0004782!1.65e-15!3;UBERON:0003281!1.65e-15!3;UBERON:0009664!1.65e-15!3;UBERON:0002296!1.65e-15!3;UBERON:0005602!1.65e-15!3;UBERON:0001179!1.65e-15!3;UBERON:0006293!1.65e-15!3;UBERON:0001896!2.05e-15!3;UBERON:0005290!2.05e-15!3;UBERON:0010096!2.05e-15!3;UBERON:0004177!1.49e-14!7;UBERON:0002298!5.95e-13!8;UBERON:0001736!7.89e-13!1;UBERON:0006298!7.89e-13!1;UBERON:0002038!1.25e-12!1;UBERON:0009661!1.25e-12!1;UBERON:0006834!2.20e-12!1;UBERON:0002336!3.45e-12!1;UBERON:0001018!3.45e-12!1;UBERON:0002473!3.45e-12!1;UBERON:0005340!3.45e-12!1;UBERON:0002316!3.45e-12!1;UBERON:0003544!3.45e-12!1;UBERON:0001020!3.45e-12!1;UBERON:0005970!3.45e-12!1;UBERON:0002437!3.45e-12!1;UBERON:0002372!3.85e-12!1;UBERON:0001961!3.85e-12!1;UBERON:0001744!3.85e-12!1;UBERON:0001735!3.85e-12!1;UBERON:0007023!4.96e-10!115;UBERON:0009663!2.60e-07!7;UBERON:0001829!4.83e-07!2;UBERON:0005057!5.97e-07!26;UBERON:0002950!6.07e-07!2;UBERON:0001891!6.07e-07!2;UBERON:0009616!6.07e-07!2;UBERON:0001875!7.61e-07!2;UBERON:0006514!7.61e-07!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58471204932564,0.426507697462265,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0.458729283404541,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p2@NLRP4 | |||
}} |
Latest revision as of 03:29, 20 September 2015
Short description: | p2@NLRP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NLRP4_5end |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | -12bp_to_uc002qmf.2_5end |
EntrezGene: | NLRP4 |
HGNC: | 22943 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.01e-09 | 24 |
pro-B cell | 1.01e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.81e-21 | 10 |