FFCP PHASE1:Hg19::chr17:39465536..39465562,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100505753 | |EntrezGene=100505753 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18916 | |HGNC=18916 | ||
|TSSclassifier=strong | |||
|UniProt=A8MUX0 | |UniProt=A8MUX0 | ||
|association_with_transcript=-31bp_to_ENST00000391352,NM_001146182_5end | |||
|cluster_id=chr17:39465536..39465562,- | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_KRTAP16-1_5end | |||
|id=chr17:39465536..39465562,- | |||
|ontology_enrichment_celltype=CL:0000838!9.91e-25!52;CL:0000542!3.50e-24!53;CL:0000051!3.50e-24!53;CL:0000791!1.82e-19!18;CL:0000789!1.82e-19!18;CL:0002420!1.82e-19!18;CL:0002419!1.82e-19!18;CL:0000790!1.82e-19!18;CL:0000084!7.86e-17!25;CL:0000827!7.86e-17!25;CL:0002087!2.13e-16!119;CL:0000738!6.68e-16!140;CL:0000623!1.31e-14!3;CL:0000825!1.31e-14!3;CL:0000842!3.26e-14!3;CL:0000037!5.30e-13!172;CL:0000566!5.30e-13!172;CL:0000624!6.86e-13!6;CL:0000988!5.90e-12!182;CL:0002031!2.63e-11!124;CL:0000224!8.80e-11!4;CL:0000625!2.50e-10!11;CL:0002032!2.84e-10!165;CL:0000837!2.84e-10!165;CL:0000080!2.49e-07!6;CL:0000767!6.96e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.71e-22;25!CL:0000791;5.76e-20;18!CL:0000789;5.76e-20;18!CL:0002419;5.76e-20;18!CL:0000625;1.04e-18;11!CL:0000542;7.67e-15;53!CL:0000236;1.02e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.88e-22,25;CL:0000827,3.88e-22,25;CL:0000838,1.37e-20,52;CL:0000542,3.35e-20,53;CL:0000051,3.35e-20,53;CL:0000791,5.49e-20,18;CL:0000789,5.49e-20,18;CL:0002420,5.49e-20,18;CL:0002419,5.49e-20,18;CL:0000790,5.49e-20,18;CL:0000625,1.04e-18,11;CL:0002087,3.61e-09,115;CL:0002031,8.82e-09,120;CL:0000738,9.95e-08,136;CL:0000236,2.95e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;5.76e-20;18!CL:0000051;7.67e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.06e-23;1!UBERON:0000014;6.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.07e-23,1;UBERON:0000014,6.50e-07,4 | |||
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| ||
|short_description=p1@KRTAP16-1 | |||
}} | }} |
Latest revision as of 04:46, 20 September 2015
Short description: | p1@KRTAP16-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRTAP16-1_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -31bp_to_ENST00000391352, NM_001146182_5end |
EntrezGene: | KRTAP16-1 |
HGNC: | 18916 |
UniProt: | A8MUX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 3.88e-22 | 25 |
pro-T cell | 3.88e-22 | 25 |
lymphoid lineage restricted progenitor cell | 1.37e-20 | 52 |
lymphocyte | 3.35e-20 | 53 |
common lymphoid progenitor | 3.35e-20 | 53 |
mature alpha-beta T cell | 5.49e-20 | 18 |
alpha-beta T cell | 5.49e-20 | 18 |
immature T cell | 5.49e-20 | 18 |
mature T cell | 5.49e-20 | 18 |
immature alpha-beta T cell | 5.49e-20 | 18 |
CD8-positive, alpha-beta T cell | 1.04e-18 | 11 |
nongranular leukocyte | 3.61e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.82e-09 | 120 |
leukocyte | 9.95e-08 | 136 |
B cell | 2.95e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
surface | 1.07e-23 | 1 |
zone of skin | 6.50e-07 | 4 |