FFCP PHASE1:Hg19::chrX:154563879..154563884,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:154563879..154563884,-
|short_description=p4@CLIC2
|description=CAGE_peak_4_at_CLIC2_5end
|association_with_transcript=-28bp_to_ENST00000465553_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1193 | |EntrezGene=1193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2063 | |HGNC=2063 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-28bp_to_ENST00000465553_5end | |||
|cluster_id=chrX:154563879..154563884,- | |||
|coexpression_cluster_id=C2958 | |||
|description=CAGE_peak_4_at_CLIC2_5end | |||
|id=chrX:154563879..154563884,- | |||
|ontology_enrichment_celltype=CL:0000763!2.33e-17!112;CL:0000049!2.33e-17!112;CL:0000839!7.04e-17!70;CL:0000557!4.49e-15!71;CL:0002009!1.29e-12!65;CL:0000766!2.51e-12!76;CL:0002194!5.33e-12!63;CL:0000576!5.33e-12!63;CL:0000040!5.33e-12!63;CL:0000559!5.33e-12!63;CL:0002057!1.14e-11!42;CL:0002032!3.96e-11!165;CL:0000837!3.96e-11!165;CL:0000037!9.20e-11!172;CL:0000566!9.20e-11!172;CL:0000990!1.34e-10!8;CL:0000860!1.63e-10!45;CL:0002031!1.32e-09!124;CL:0000988!1.76e-09!182;CL:0000738!1.06e-08!140;CL:0000451!2.20e-08!10;CL:0000453!5.96e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000990;9.44e-50;8!CL:0000451;1.09e-40;10!CL:0000764;3.37e-26;2!CL:0000558;3.37e-26;2!CL:0000453;1.69e-23;5!CL:0000840;2.82e-19;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,7.04e-50,8;CL:0000451,8.55e-41,10;CL:0000764,3.16e-26,2;CL:0000765,3.16e-26,2;CL:0000050,3.16e-26,2;CL:0000038,3.16e-26,2;CL:0000558,3.16e-26,2;CL:0000547,3.16e-26,2;CL:0000549,3.16e-26,2;CL:0000550,3.16e-26,2;CL:0000552,3.16e-26,2;CL:0000453,1.63e-23,5;CL:0000840,2.34e-19,5;CL:0001029,2.34e-19,5;CL:0000763,9.57e-18,108;CL:0000049,9.57e-18,108;CL:0002032,2.08e-11,161;CL:0000837,2.08e-11,161;CL:0000839,4.17e-11,66;CL:0000037,7.26e-11,168;CL:0000988,3.13e-10,177;CL:0002194,4.02e-07,59;CL:0000576,4.02e-07,59;CL:0000040,4.02e-07,59;CL:0000559,4.02e-07,59;CL:0002009,7.02e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!9.66e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.69e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.99e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.57e-18!102;UBERON:0003061!2.57e-18!102;UBERON:0002193!1.63e-16!112;UBERON:0007023!7.91e-14!115;UBERON:0002371!2.26e-13!80;UBERON:0002405!7.14e-12!115;UBERON:0001474!8.07e-12!86;UBERON:0004765!2.32e-10!101;UBERON:0001434!2.32e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.57e-07,98;UBERON:0003061,3.57e-07,98 | |||
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| ||
|short_description=p4@CLIC2 | |||
}} | }} |
Latest revision as of 04:48, 20 September 2015
Short description: | p4@CLIC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CLIC2_5end |
Coexpression cluster: | C2958_migratory_Reticulocytes_Dendritic_CD14_vagina_thyroid_splenic |
Association with transcript: | -28bp_to_ENST00000465553_5end |
EntrezGene: | CLIC2 |
HGNC: | 2063 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 7.04e-50 | 8 |
dendritic cell | 8.55e-41 | 10 |
erythroid lineage cell | 3.16e-26 | 2 |
erythroblast | 3.16e-26 | 2 |
megakaryocyte-erythroid progenitor cell | 3.16e-26 | 2 |
erythroid progenitor cell | 3.16e-26 | 2 |
reticulocyte | 3.16e-26 | 2 |
proerythroblast | 3.16e-26 | 2 |
basophilic erythroblast | 3.16e-26 | 2 |
polychromatophilic erythroblast | 3.16e-26 | 2 |
orthochromatic erythroblast | 3.16e-26 | 2 |
Langerhans cell | 1.63e-23 | 5 |
immature conventional dendritic cell | 2.34e-19 | 5 |
common dendritic progenitor | 2.34e-19 | 5 |
myeloid cell | 9.57e-18 | 108 |
common myeloid progenitor | 9.57e-18 | 108 |
hematopoietic oligopotent progenitor cell | 2.08e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.08e-11 | 161 |
myeloid lineage restricted progenitor cell | 4.17e-11 | 66 |
hematopoietic stem cell | 7.26e-11 | 168 |
hematopoietic cell | 3.13e-10 | 177 |
monopoietic cell | 4.02e-07 | 59 |
monocyte | 4.02e-07 | 59 |
monoblast | 4.02e-07 | 59 |
promonocyte | 4.02e-07 | 59 |
macrophage dendritic cell progenitor | 7.02e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.57e-07 | 98 |
blood island | 3.57e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.99e-07 | 8 |