FFCP PHASE1:Hg19::chr4:103748215..103748226,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:103748215..103748226,- to FFCP PHASE1:Hg19::chr4:103748215..103748226,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7323 | |EntrezGene=7323 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12476 | |HGNC=12476 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-48bp_to_ENST00000513098_5end | |||
|cluster_id=chr4:103748215..103748226,- | |||
|description=CAGE_peak_15_at_UBE2D3_5end | |||
|id=chr4:103748215..103748226,- | |||
|ontology_enrichment_celltype=CL:0002371!1.35e-19!591;CL:0000144!9.20e-19!625;CL:0000012!9.82e-18!682;CL:0000548!1.67e-17!679;CL:0000004!1.67e-17!679;CL:0000255!1.67e-17!679;CL:0002057!1.91e-17!42;CL:0000860!4.79e-15!45;CL:0000003!6.37e-12!722;CL:0000723!2.97e-10!436;CL:0000063!4.03e-10!578;CL:0000048!4.34e-10!430;CL:0000192!4.48e-10!42;CL:0000514!4.48e-10!42;CL:0000055!5.17e-10!180;CL:0000766!7.82e-10!76;CL:0000359!1.25e-09!32;CL:0000680!1.48e-09!57;CL:0000056!1.48e-09!57;CL:0000355!1.48e-09!57;CL:0000034!1.62e-09!444;CL:0000187!5.36e-09!54;CL:0000183!1.06e-08!59;CL:0002009!6.14e-08!65;CL:0000057!1.64e-07!75;CL:0000557!3.35e-07!71;CL:0002194!4.27e-07!63;CL:0000576!4.27e-07!63;CL:0000040!4.27e-07!63;CL:0000559!4.27e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.47e-15;33!CL:0002057;5.47e-15;33!CL:0000473;4.61e-09;39!CL:0000234;4.61e-09;39!CL:0000359;4.71e-09;32!CL:0000576;1.77e-08;48!CL:0000192;5.18e-08;43!CL:0000766;4.41e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.66e-18,42;CL:0002057,9.66e-18,42;CL:0000473,2.16e-13,48;CL:0000234,2.16e-13,48;CL:0000723,4.62e-12,433;CL:0000048,6.97e-12,427;CL:0000766,1.73e-11,72;CL:0000034,4.48e-11,441;CL:0000192,2.16e-10,43;CL:0000514,2.16e-10,43;CL:0000680,7.21e-10,58;CL:0000056,7.21e-10,58;CL:0000355,7.21e-10,58;CL:0000359,8.85e-10,32;CL:0002009,1.75e-09,61;CL:0000187,2.68e-09,55;CL:0000557,1.48e-08,67;CL:0002194,1.54e-08,59;CL:0000576,1.54e-08,59;CL:0000040,1.54e-08,59;CL:0000559,1.54e-08,59;CL:0000057,1.23e-07,76;CL:0000839,1.91e-07,66;CL:0000393,5.88e-07,61;CL:0000211,5.88e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;3.25e-13;42!CL:0000514;5.18e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.17e-15!167;UBERON:0000926!4.86e-15!448;UBERON:0004120!4.86e-15!448;UBERON:0006603!4.86e-15!448;UBERON:0000486!1.30e-13!82;UBERON:0003081!1.65e-13!216;UBERON:0004290!8.12e-11!70;UBERON:0000914!1.38e-10!83;UBERON:0002329!1.38e-10!83;UBERON:0003077!1.38e-10!83;UBERON:0003059!1.38e-10!83;UBERON:0007282!1.38e-10!83;UBERON:0009618!1.38e-10!83;UBERON:0007285!1.38e-10!83;UBERON:0001134!1.42e-09!61;UBERON:0002036!1.42e-09!61;UBERON:0003082!1.42e-09!61;UBERON:0002385!4.11e-09!63;UBERON:0001015!4.11e-09!63;UBERON:0000383!4.11e-09!63;UBERON:0000467!5.86e-09!625;UBERON:0000468!6.10e-09!659;UBERON:0000480!1.15e-08!626;UBERON:0003102!3.13e-08!95;UBERON:0005256!2.30e-07!143;UBERON:0002390!4.63e-07!102;UBERON:0003061!4.63e-07!102;UBERON:0002199!5.16e-07!45;UBERON:0002416!5.16e-07!45;UBERON:0004765!5.29e-07!101;UBERON:0001434!5.29e-07!101;UBERON:0001637!9.47e-07!42;UBERON:0003509!9.47e-07!42;UBERON:0004572!9.47e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,9.67e-20,315;UBERON:0004120,9.67e-20,315;UBERON:0006603,9.67e-20,315;UBERON:0002204,1.42e-16,167;UBERON:0003081,3.10e-14,203;UBERON:0000486,6.35e-14,83;UBERON:0002329,4.49e-11,71;UBERON:0003059,4.49e-11,71;UBERON:0007282,4.49e-11,71;UBERON:0004290,4.49e-11,71;UBERON:0009618,4.49e-11,71;UBERON:0003077,1.65e-10,72;UBERON:0007285,1.65e-10,72;UBERON:0007503,3.37e-10,78;UBERON:0007524,5.72e-10,73;UBERON:0001134,8.32e-10,62;UBERON:0002036,8.32e-10,62;UBERON:0003082,8.32e-10,62;UBERON:0002385,2.44e-09,64;UBERON:0001015,2.44e-09,64;UBERON:0000383,2.44e-09,64;UBERON:0003102,2.99e-09,99;UBERON:0002390,3.10e-08,98;UBERON:0003061,3.10e-08,98;UBERON:0002371,5.75e-08,76;UBERON:0001434,1.59e-07,100;UBERON:0002199,1.65e-07,46;UBERON:0002416,1.65e-07,46;UBERON:0004765,2.51e-07,90;UBERON:0002193,2.81e-07,108;UBERON:0001474,2.87e-07,82;UBERON:0001637,8.34e-07,42;UBERON:0003509,8.34e-07,42;UBERON:0004572,8.34e-07,42 | |||
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| ||
|short_description=p15@UBE2D3 | |||
}} | }} |
Latest revision as of 04:58, 20 September 2015
Short description: | p15@UBE2D3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_UBE2D3_5end |
Coexpression cluster: | NA |
Association with transcript: | -48bp_to_ENST00000513098_5end |
EntrezGene: | UBE2D3 |
HGNC: | 12476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.66e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.66e-18 | 42 |
defensive cell | 2.16e-13 | 48 |
phagocyte | 2.16e-13 | 48 |
somatic stem cell | 4.62e-12 | 433 |
multi fate stem cell | 6.97e-12 | 427 |
myeloid leukocyte | 1.73e-11 | 72 |
stem cell | 4.48e-11 | 441 |
smooth muscle cell | 2.16e-10 | 43 |
smooth muscle myoblast | 2.16e-10 | 43 |
muscle precursor cell | 7.21e-10 | 58 |
myoblast | 7.21e-10 | 58 |
multi-potent skeletal muscle stem cell | 7.21e-10 | 58 |
vascular associated smooth muscle cell | 8.85e-10 | 32 |
macrophage dendritic cell progenitor | 1.75e-09 | 61 |
muscle cell | 2.68e-09 | 55 |
granulocyte monocyte progenitor cell | 1.48e-08 | 67 |
monopoietic cell | 1.54e-08 | 59 |
monocyte | 1.54e-08 | 59 |
monoblast | 1.54e-08 | 59 |
promonocyte | 1.54e-08 | 59 |
fibroblast | 1.23e-07 | 76 |
myeloid lineage restricted progenitor cell | 1.91e-07 | 66 |
electrically responsive cell | 5.88e-07 | 61 |
electrically active cell | 5.88e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 9.67e-20 | 315 |
mesoderm-derived structure | 9.67e-20 | 315 |
presumptive mesoderm | 9.67e-20 | 315 |
musculoskeletal system | 1.42e-16 | 167 |
lateral plate mesoderm | 3.10e-14 | 203 |
multilaminar epithelium | 6.35e-14 | 83 |
somite | 4.49e-11 | 71 |
presomitic mesoderm | 4.49e-11 | 71 |
presumptive segmental plate | 4.49e-11 | 71 |
dermomyotome | 4.49e-11 | 71 |
trunk paraxial mesoderm | 4.49e-11 | 71 |
paraxial mesoderm | 1.65e-10 | 72 |
presumptive paraxial mesoderm | 1.65e-10 | 72 |
epithelial vesicle | 3.37e-10 | 78 |
dense mesenchyme tissue | 5.72e-10 | 73 |
skeletal muscle tissue | 8.32e-10 | 62 |
striated muscle tissue | 8.32e-10 | 62 |
myotome | 8.32e-10 | 62 |
muscle tissue | 2.44e-09 | 64 |
musculature | 2.44e-09 | 64 |
musculature of body | 2.44e-09 | 64 |
surface structure | 2.99e-09 | 99 |
hematopoietic system | 3.10e-08 | 98 |
blood island | 3.10e-08 | 98 |
bone marrow | 5.75e-08 | 76 |
skeletal system | 1.59e-07 | 100 |
integument | 1.65e-07 | 46 |
integumental system | 1.65e-07 | 46 |
skeletal element | 2.51e-07 | 90 |
hemolymphoid system | 2.81e-07 | 108 |
bone element | 2.87e-07 | 82 |
artery | 8.34e-07 | 42 |
arterial blood vessel | 8.34e-07 | 42 |
arterial system | 8.34e-07 | 42 |