FFCP PHASE1:Hg19::chr4:103748838..103748866,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7323 | |EntrezGene=7323 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12476 | |HGNC=12476 | ||
|TSSclassifier=strong | |||
|UniProt=P61077 | |UniProt=P61077 | ||
|association_with_transcript=102bp_to_ENST00000453744_5end | |association_with_transcript=102bp_to_ENST00000453744_5end | ||
|cluster_id=chr4:103748838..103748866,- | |||
|description=CAGE_peak_12_at_UBE2D3_5end | |description=CAGE_peak_12_at_UBE2D3_5end | ||
|id=chr4:103748838..103748866,- | |id=chr4:103748838..103748866,- | ||
|ontology_enrichment_celltype=CL:0000860;3.61e-11;33!CL:0002057;3.61e-11;33!CL:0000473;7.41e-10;39!CL:0000234;7.41e-10;39!CL:0002334;7.35e-07;12 | |ontology_enrichment_celltype=CL:0000048!8.04e-16!430;CL:0000723!3.03e-15!436;CL:0000034!6.88e-14!444;CL:0000144!5.62e-13!625;CL:0002371!1.58e-12!591;CL:0000548!1.79e-10!679;CL:0000004!1.79e-10!679;CL:0000255!1.79e-10!679;CL:0000012!3.36e-10!682;CL:0000680!1.72e-08!57;CL:0000056!1.72e-08!57;CL:0000355!1.72e-08!57;CL:0000055!3.09e-08!180;CL:0000134!3.25e-08!358;CL:0000187!8.61e-08!54;CL:0000766!3.14e-07!76;CL:0002057!3.84e-07!42;CL:0002320!4.09e-07!365;CL:0000393!6.38e-07!60;CL:0000211!6.38e-07!60;CL:0002334!9.61e-07!12 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.61e-11;33!CL:0002057;3.61e-11;33!CL:0000473;7.41e-10;39!CL:0000234;7.41e-10;39!CL:0002334;7.35e-07;12 | ||
|ontology_enrichment_disease=DOID:2394;3.37e-07;14 | |ontology_enrichment_celltype_v019_2=CL:0000048,8.80e-17,427;CL:0000723,2.93e-16,433;CL:0000034,8.13e-15,441;CL:0000134,3.71e-09,354;CL:0000766,3.04e-08,72;CL:0002320,5.65e-08,361;CL:0000680,6.35e-08,58;CL:0000056,6.35e-08,58;CL:0000355,6.35e-08,58;CL:0000473,8.73e-08,48;CL:0000234,8.73e-08,48;CL:0002009,1.82e-07,61;CL:0000187,3.06e-07,55;CL:0000860,4.07e-07,42;CL:0002057,4.07e-07,42;CL:0002194,4.46e-07,59;CL:0000576,4.46e-07,59;CL:0000040,4.46e-07,59;CL:0000559,4.46e-07,59;CL:0000839,6.83e-07,66;CL:0000557,7.93e-07,67;CL:0002334,9.21e-07,12 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!6.42e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.37e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.14e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.23e-11!167;UBERON:0000486!2.58e-08!82;UBERON:0004290!2.83e-08!70;UBERON:0001134!5.58e-08!61;UBERON:0002036!5.58e-08!61;UBERON:0003082!5.58e-08!61;UBERON:0000914!6.53e-08!83;UBERON:0002329!6.53e-08!83;UBERON:0003077!6.53e-08!83;UBERON:0003059!6.53e-08!83;UBERON:0007282!6.53e-08!83;UBERON:0009618!6.53e-08!83;UBERON:0007285!6.53e-08!83;UBERON:0002385!1.70e-07!63;UBERON:0001015!1.70e-07!63;UBERON:0000383!1.70e-07!63 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,7.46e-15,315;UBERON:0004120,7.46e-15,315;UBERON:0006603,7.46e-15,315;UBERON:0002204,2.59e-11,167;UBERON:0000486,5.81e-08,83;UBERON:0002329,7.50e-08,71;UBERON:0003059,7.50e-08,71;UBERON:0007282,7.50e-08,71;UBERON:0004290,7.50e-08,71;UBERON:0009618,7.50e-08,71;UBERON:0007524,7.79e-08,73;UBERON:0003081,8.18e-08,203;UBERON:0003077,8.29e-08,72;UBERON:0007285,8.29e-08,72;UBERON:0001134,1.81e-07,62;UBERON:0002036,1.81e-07,62;UBERON:0003082,1.81e-07,62;UBERON:0002385,5.11e-07,64;UBERON:0001015,5.11e-07,64;UBERON:0000383,5.11e-07,64;UBERON:0002384,6.69e-07,371 | |||
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| ||
|short_description=p12@UBE2D3 | |short_description=p12@UBE2D3 | ||
}} | }} |
Latest revision as of 05:05, 20 September 2015
Short description: | p12@UBE2D3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_UBE2D3_5end |
Coexpression cluster: | NA |
Association with transcript: | 102bp_to_ENST00000453744_5end |
EntrezGene: | UBE2D3 |
HGNC: | 12476 |
UniProt: | P61077 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 8.80e-17 | 427 |
somatic stem cell | 2.93e-16 | 433 |
stem cell | 8.13e-15 | 441 |
mesenchymal cell | 3.71e-09 | 354 |
myeloid leukocyte | 3.04e-08 | 72 |
connective tissue cell | 5.65e-08 | 361 |
muscle precursor cell | 6.35e-08 | 58 |
myoblast | 6.35e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.35e-08 | 58 |
defensive cell | 8.73e-08 | 48 |
phagocyte | 8.73e-08 | 48 |
macrophage dendritic cell progenitor | 1.82e-07 | 61 |
muscle cell | 3.06e-07 | 55 |
classical monocyte | 4.07e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.07e-07 | 42 |
monopoietic cell | 4.46e-07 | 59 |
monocyte | 4.46e-07 | 59 |
monoblast | 4.46e-07 | 59 |
promonocyte | 4.46e-07 | 59 |
myeloid lineage restricted progenitor cell | 6.83e-07 | 66 |
granulocyte monocyte progenitor cell | 7.93e-07 | 67 |
preadipocyte | 9.21e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 7.46e-15 | 315 |
mesoderm-derived structure | 7.46e-15 | 315 |
presumptive mesoderm | 7.46e-15 | 315 |
musculoskeletal system | 2.59e-11 | 167 |
multilaminar epithelium | 5.81e-08 | 83 |
somite | 7.50e-08 | 71 |
presomitic mesoderm | 7.50e-08 | 71 |
presumptive segmental plate | 7.50e-08 | 71 |
dermomyotome | 7.50e-08 | 71 |
trunk paraxial mesoderm | 7.50e-08 | 71 |
dense mesenchyme tissue | 7.79e-08 | 73 |
lateral plate mesoderm | 8.18e-08 | 203 |
paraxial mesoderm | 8.29e-08 | 72 |
presumptive paraxial mesoderm | 8.29e-08 | 72 |
skeletal muscle tissue | 1.81e-07 | 62 |
striated muscle tissue | 1.81e-07 | 62 |
myotome | 1.81e-07 | 62 |
muscle tissue | 5.11e-07 | 64 |
musculature | 5.11e-07 | 64 |
musculature of body | 5.11e-07 | 64 |
connective tissue | 6.69e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.14e-07 | 14 |