FFCP PHASE1:Hg19::chr12:70093162..70093173,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144453 | |EntrezGene=144453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17105 | |HGNC=17105 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000551160_5end | |association_with_transcript=1bp_to_ENST00000551160_5end | ||
|cluster_id=chr12:70093162..70093173,- | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_4_at_BEST3_5end | |description=CAGE_peak_4_at_BEST3_5end | ||
|id=chr12:70093162..70093173,- | |id=chr12:70093162..70093173,- | ||
|ontology_enrichment_celltype=CL:0000242!3.28e-08!2 | |ontology_enrichment_celltype=CL:0000242!3.28e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;4.38e-25;2!CL:0000242;4.38e-25;2!CL:0000785;3.76e-13;1!CL:0000819;3.76e-13;1!CL:0000312;1.27e-10;5!CL:0000240;5.35e-09;6!CL:0000311;5.35e-09;6!CL:0000079;5.35e-09;6!CL:0000237;5.35e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.38e-25,2;CL:0000819,3.33e-13,1;CL:0000312,1.27e-10,5;CL:0000240,5.35e-09,6;CL:0000311,5.35e-09,6;CL:0000079,5.35e-09,6;CL:0000237,5.35e-09,6;CL:0000036,5.35e-09,6;CL:0000357,5.35e-09,6;CL:0000114,5.35e-09,6;CL:0000785,3.09e-07,2;CL:0000955,3.09e-07,2;CL:0000818,3.09e-07,2;CL:0000954,3.09e-07,2;CL:0000816,3.09e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;7.24e-13;1!CL:0000357;5.35e-09;6!CL:0000114;5.35e-09;6!UBERON:0008814;2.74e-07;2!UBERON:0010056;2.74e-07;2!CL:0000954;3.28e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;3.76e-13;1!DOID:8675;3.76e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.33e-13,1;DOID:8675,3.33e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.88e-22!115;UBERON:0001049!1.73e-21!57;UBERON:0005068!1.73e-21!57;UBERON:0006241!1.73e-21!57;UBERON:0007135!1.73e-21!57;UBERON:0002616!1.60e-18!59;UBERON:0005743!1.89e-16!86;UBERON:0001017!5.04e-16!82;UBERON:0003075!3.75e-15!86;UBERON:0007284!3.75e-15!86;UBERON:0000955!8.36e-15!69;UBERON:0006238!8.36e-15!69;UBERON:0000073!2.52e-14!94;UBERON:0001016!2.52e-14!94;UBERON:0002346!3.24e-14!90;UBERON:0000153!2.93e-13!129;UBERON:0007811!2.93e-13!129;UBERON:0002298!8.37e-13!8;UBERON:0002780!1.55e-12!41;UBERON:0001890!1.55e-12!41;UBERON:0006240!1.55e-12!41;UBERON:0003080!3.65e-12!42;UBERON:0003076!1.04e-11!15;UBERON:0003057!1.04e-11!15;UBERON:0002020!1.53e-11!34;UBERON:0003528!1.53e-11!34;UBERON:0001893!1.87e-11!34;UBERON:0004733!2.19e-11!12;UBERON:0002028!2.19e-11!12;UBERON:0007277!2.19e-11!12;UBERON:0000033!9.05e-11!123;UBERON:0004732!1.96e-10!13;UBERON:0004121!2.93e-10!169;UBERON:0002791!4.60e-10!33;UBERON:0001950!7.19e-10!20;UBERON:0000924!7.43e-10!173;UBERON:0006601!7.43e-10!173;UBERON:0006331!9.23e-10!3;UBERON:0000988!1.92e-09!3;UBERON:0002619!7.13e-09!22;UBERON:0001869!1.19e-08!32;UBERON:0003056!1.42e-08!61;UBERON:0002680!2.55e-08!9;UBERON:0001895!2.55e-08!9;UBERON:0010092!2.55e-08!9;UBERON:0001630!4.02e-08!2;UBERON:0005090!4.02e-08!2;UBERON:0000200!5.78e-08!6;UBERON:0000341!8.39e-08!2;UBERON:0000475!9.47e-08!365;UBERON:0000956!1.14e-07!25;UBERON:0000203!1.14e-07!25;UBERON:0000483!1.58e-07!309;UBERON:0001897!2.02e-07!2;UBERON:0000119!2.29e-07!312;UBERON:0002148!6.46e-07!2;UBERON:0009662!6.46e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!3.88e-22!115;UBERON:0001049!1.73e-21!57;UBERON:0005068!1.73e-21!57;UBERON:0006241!1.73e-21!57;UBERON:0007135!1.73e-21!57;UBERON:0002616!1.60e-18!59;UBERON:0005743!1.89e-16!86;UBERON:0001017!5.04e-16!82;UBERON:0003075!3.75e-15!86;UBERON:0007284!3.75e-15!86;UBERON:0000955!8.36e-15!69;UBERON:0006238!8.36e-15!69;UBERON:0000073!2.52e-14!94;UBERON:0001016!2.52e-14!94;UBERON:0002346!3.24e-14!90;UBERON:0000153!2.93e-13!129;UBERON:0007811!2.93e-13!129;UBERON:0002298!8.37e-13!8;UBERON:0002780!1.55e-12!41;UBERON:0001890!1.55e-12!41;UBERON:0006240!1.55e-12!41;UBERON:0003080!3.65e-12!42;UBERON:0003076!1.04e-11!15;UBERON:0003057!1.04e-11!15;UBERON:0002020!1.53e-11!34;UBERON:0003528!1.53e-11!34;UBERON:0001893!1.87e-11!34;UBERON:0004733!2.19e-11!12;UBERON:0002028!2.19e-11!12;UBERON:0007277!2.19e-11!12;UBERON:0000033!9.05e-11!123;UBERON:0004732!1.96e-10!13;UBERON:0004121!2.93e-10!169;UBERON:0002791!4.60e-10!33;UBERON:0001950!7.19e-10!20;UBERON:0000924!7.43e-10!173;UBERON:0006601!7.43e-10!173;UBERON:0006331!9.23e-10!3;UBERON:0000988!1.92e-09!3;UBERON:0002619!7.13e-09!22;UBERON:0001869!1.19e-08!32;UBERON:0003056!1.42e-08!61;UBERON:0002680!2.55e-08!9;UBERON:0001895!2.55e-08!9;UBERON:0010092!2.55e-08!9;UBERON:0001630!4.02e-08!2;UBERON:0005090!4.02e-08!2;UBERON:0000200!5.78e-08!6;UBERON:0000341!8.39e-08!2;UBERON:0000475!9.47e-08!365;UBERON:0000956!1.14e-07!25;UBERON:0000203!1.14e-07!25;UBERON:0000483!1.58e-07!309;UBERON:0001897!2.02e-07!2;UBERON:0000119!2.29e-07!312;UBERON:0002148!6.46e-07!2;UBERON:0009662!6.46e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0005090;1.37e-24;2!UBERON:0001630;1.37e-24;2!UBERON:0001134;2.45e-18;16!UBERON:0002036;2.45e-18;16!UBERON:0001723;1.32e-16;3!UBERON:0001033;1.32e-16;3!UBERON:0001389;1.61e-13;1!UBERON:0000026;1.61e-13;1!UBERON:0008784;1.61e-13;1!UBERON:0006058;1.61e-13;1!UBERON:0003663;1.61e-13;1!UBERON:0004256;1.61e-13;1!UBERON:0004708;1.61e-13;1!UBERON:0002101;1.61e-13;1!UBERON:0004709;1.61e-13;1!UBERON:0002529;1.61e-13;1!UBERON:0010538;1.61e-13;1!UBERON:0003661;1.61e-13;1!UBERON:0010890;1.61e-13;1!UBERON:0002471;1.61e-13;1!UBERON:0001383;1.61e-13;1!UBERON:0010758;1.61e-13;1!UBERON:0010707;1.61e-13;1!UBERON:0000978;1.61e-13;1!UBERON:0002103;1.61e-13;1!UBERON:0001665;1.61e-13;1!UBERON:0003823;1.61e-13;1!UBERON:0000154;1.61e-13;1!UBERON:0010709;1.61e-13;1!UBERON:0000989;7.24e-13;1!UBERON:0008811;7.24e-13;1!UBERON:0002426;7.24e-13;1!UBERON:0003831;7.24e-13;1!UBERON:0003898;7.24e-13;1!UBERON:0004830;7.24e-13;1!UBERON:0003830;7.24e-13;1!UBERON:0005175;7.24e-13;1!UBERON:0001774;7.24e-13;1!UBERON:0001103;7.24e-13;1!UBERON:0002385;1.95e-09;31!UBERON:0001015;1.95e-09;31!UBERON:0000383;1.95e-09;31!UBERON:0000341;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,9.02e-25,2;UBERON:0001630,9.02e-25,2;UBERON:0001723,1.08e-16,3;UBERON:0001033,1.08e-16,3;UBERON:0010056,1.08e-16,3;UBERON:0005418,1.61e-13,1;UBERON:0001389,1.61e-13,1;UBERON:0000026,1.61e-13,1;UBERON:0008784,1.61e-13,1;UBERON:0006058,1.61e-13,1;UBERON:0003663,1.61e-13,1;UBERON:0004256,1.61e-13,1;UBERON:0004708,1.61e-13,1;UBERON:0002101,1.61e-13,1;UBERON:0004709,1.61e-13,1;UBERON:0002529,1.61e-13,1;UBERON:0010538,1.61e-13,1;UBERON:0003661,1.61e-13,1;UBERON:0010890,1.61e-13,1;UBERON:0002471,1.61e-13,1;UBERON:0001383,1.61e-13,1;UBERON:0004357,1.61e-13,1;UBERON:0004347,1.61e-13,1;UBERON:0005420,1.61e-13,1;UBERON:0005732,1.61e-13,1;UBERON:0010758,1.61e-13,1;UBERON:0010707,1.61e-13,1;UBERON:0000978,1.61e-13,1;UBERON:0002103,1.61e-13,1;UBERON:0001665,1.61e-13,1;UBERON:0003823,1.61e-13,1;UBERON:0000154,1.61e-13,1;UBERON:0010709,1.61e-13,1;UBERON:0005733,1.61e-13,1;UBERON:0005730,1.61e-13,1;UBERON:0002426,4.77e-13,1;UBERON:0003831,4.77e-13,1;UBERON:0003898,4.77e-13,1;UBERON:0004830,4.77e-13,1;UBERON:0003830,4.77e-13,1;UBERON:0005175,4.77e-13,1;UBERON:0001774,4.77e-13,1;UBERON:0001103,4.77e-13,1;UBERON:0010084,4.77e-13,1;UBERON:0000989,5.38e-13,1;UBERON:0008811,5.38e-13,1;UBERON:0006258,5.38e-13,1;UBERON:0005876,5.38e-13,1;UBERON:0004874,5.38e-13,1;UBERON:0000341,4.69e-07,2 | |||
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|short_description=p4@BEST3 | |short_description=p4@BEST3 | ||
}} | }} |
Latest revision as of 06:42, 20 September 2015
Short description: | p4@BEST3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BEST3_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 1bp_to_ENST00000551160_5end |
EntrezGene: | BEST3 |
HGNC: | 17105 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.38e-25 | 2 |
B-1 B cell | 3.33e-13 | 1 |
keratinocyte | 1.27e-10 | 5 |
stratified squamous epithelial cell | 5.35e-09 | 6 |
keratin accumulating cell | 5.35e-09 | 6 |
stratified epithelial cell | 5.35e-09 | 6 |
keratinizing barrier epithelial cell | 5.35e-09 | 6 |
epithelial fate stem cell | 5.35e-09 | 6 |
stratified epithelial stem cell | 5.35e-09 | 6 |
surface ectodermal cell | 5.35e-09 | 6 |
mature B cell | 3.09e-07 | 2 |
pre-B-II cell | 3.09e-07 | 2 |
transitional stage B cell | 3.09e-07 | 2 |
small pre-B-II cell | 3.09e-07 | 2 |
immature B cell | 3.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.33e-13 | 1 |
lymphosarcoma | 3.33e-13 | 1 |