FFCP PHASE1:Hg19::chr19:5851442..5851487,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2525 | |EntrezGene=2525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4014 | |HGNC=4014 | ||
|TSSclassifier=strong | |||
|UniProt=P21217,A8K737 | |UniProt=P21217,A8K737 | ||
|association_with_transcript=0bp_to_ENST00000303225,ENST00000458379,NM_000149,NM_001097639,NM_001097640,NM_001097641,uc002mdj.2,uc002mdk.2,uc002mdl.2,uc002mdm.2_5end | |association_with_transcript=0bp_to_ENST00000303225,ENST00000458379,NM_000149,NM_001097639,NM_001097640,NM_001097641,uc002mdj.2,uc002mdk.2,uc002mdl.2,uc002mdm.2_5end | ||
|cluster_id=chr19:5851442..5851487,- | |||
|description=CAGE_peak_1_at_FUT3_5end | |description=CAGE_peak_1_at_FUT3_5end | ||
|id=chr19:5851442..5851487,- | |id=chr19:5851442..5851487,- | ||
|ontology_enrichment_celltype=CL:0002076!1.21e-22!43;CL:0000066!3.55e-21!254;CL:0000223!1.13e-16!59;CL:0002368!7.10e-13!13;CL:0002251!1.00e-10!21;CL:0002202!2.01e-08!9;CL:0002632!2.01e-08!9;CL:0002159!8.21e-07!13 | |ontology_enrichment_celltype=CL:0002076!1.21e-22!43;CL:0000066!3.55e-21!254;CL:0000223!1.13e-16!59;CL:0002368!7.10e-13!13;CL:0002251!1.00e-10!21;CL:0002202!2.01e-08!9;CL:0002632!2.01e-08!9;CL:0002159!8.21e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;9.90e-20;42!CL:0002368;1.24e-16;13!CL:0002202;9.25e-11;9!CL:0002632;9.25e-11;9!CL:0002251;2.55e-10;20!CL:1000507;3.38e-09;10!CL:1000494;3.38e-09;10!CL:0000244;8.05e-08;4!CL:0000731;8.05e-08;4!CL:1000449;2.16e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.58e-26,42;CL:0000066,9.99e-23,253;CL:0000223,5.34e-18,58;CL:0002368,1.22e-16,13;CL:0002202,9.13e-11,9;CL:0002632,9.13e-11,9;CL:0002251,2.64e-10,20;CL:1000507,3.52e-09,10;CL:1000494,3.52e-09,10;CL:0000244,8.33e-08,4;CL:0000731,8.33e-08,4;CL:1000449,2.22e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000223;4.79e-10;58!UBERON:0006595;4.80e-07;86 | |||
|ontology_enrichment_disease=DOID:1749!2.81e-13!14;DOID:305!1.32e-11!106;DOID:0050687!2.57e-07!143 | |ontology_enrichment_disease=DOID:1749!2.81e-13!14;DOID:305!1.32e-11!106;DOID:0050687!2.57e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;5.69e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.29e-15,14;DOID:305,1.52e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.06e-26!169;UBERON:0000925!2.06e-26!169;UBERON:0006595!2.06e-26!169;UBERON:0001007!9.29e-20!155;UBERON:0001555!9.29e-20!155;UBERON:0007026!9.29e-20!155;UBERON:0001004!1.26e-18!72;UBERON:0004921!4.57e-18!129;UBERON:0004185!4.57e-18!129;UBERON:0000464!9.48e-17!104;UBERON:0000077!1.57e-15!130;UBERON:0000466!5.66e-15!126;UBERON:0000161!1.18e-12!35;UBERON:0000065!3.49e-12!53;UBERON:0001041!1.46e-11!98;UBERON:0000166!1.81e-11!21;UBERON:0005178!4.20e-11!34;UBERON:0002224!4.20e-11!34;UBERON:0005181!1.34e-10!35;UBERON:0005177!5.24e-10!107;UBERON:0005911!6.60e-10!82;UBERON:0001008!1.45e-09!45;UBERON:0000058!2.07e-09!26;UBERON:0005153!5.46e-09!37;UBERON:0006554!6.54e-09!44;UBERON:0000165!1.67e-08!28;UBERON:0000930!1.67e-08!28;UBERON:0000062!2.33e-08!511;UBERON:0007196!7.45e-08!14;UBERON:0001558!7.45e-08!14;UBERON:0002048!8.05e-08!22;UBERON:0000117!8.05e-08!22;UBERON:0000171!8.05e-08!22;UBERON:0000170!8.05e-08!22;UBERON:0005597!8.05e-08!22;UBERON:0000118!8.05e-08!22;UBERON:0002553!1.02e-07!70;UBERON:0003064!2.12e-07!37;UBERON:0000072!2.14e-07!46;UBERON:0000915!2.23e-07!52;UBERON:0003104!2.96e-07!238;UBERON:0009142!2.96e-07!238;UBERON:0000064!3.46e-07!219;UBERON:0008947!4.08e-07!38;UBERON:0003258!4.08e-07!38;UBERON:0009569!4.08e-07!113;UBERON:0000344!4.15e-07!12;UBERON:0000365!4.24e-07!5;UBERON:0004807!4.91e-07!28;UBERON:0005631!6.78e-07!14;UBERON:0000158!6.78e-07!14;UBERON:0002294!8.31e-07!7;UBERON:0001173!8.31e-07!7;UBERON:0004912!8.31e-07!7;UBERON:0001044!9.79e-07!6;UBERON:0003293!9.79e-07!6;UBERON:0003294!9.79e-07!6;UBERON:0010047!9.79e-07!6;UBERON:0000167!9.79e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;6.04e-13;33!UBERON:0005178;2.88e-11;34!UBERON:0002224;2.88e-11;34!UBERON:0005181;1.69e-10;35!UBERON:0001555;7.89e-10;54!UBERON:0000161;1.52e-09;19!UBERON:0000166;1.52e-09;19!UBERON:0007196;1.70e-09;15!UBERON:0001558;1.70e-09;15!UBERON:0000165;2.76e-09;28!UBERON:0004211;3.38e-09;10!UBERON:0009773;3.38e-09;10!UBERON:0001231;3.38e-09;10!UBERON:0004810;3.38e-09;10!UBERON:0006554;6.03e-09;30!UBERON:0001008;6.03e-09;30!UBERON:0000365;6.46e-09;5!UBERON:0001004;7.62e-09;65!UBERON:0005911;1.07e-08;36!UBERON:0002294;1.19e-08;7!UBERON:0001173;1.19e-08;7!UBERON:0002048;4.40e-08;22!UBERON:0000117;4.40e-08;22!UBERON:0000171;4.40e-08;22!UBERON:0000170;4.40e-08;22!UBERON:0004807;4.63e-08;22!UBERON:0000486;9.11e-08;12!UBERON:0001041;1.00e-07;14!UBERON:0000344;1.56e-07;20!UBERON:0000065;1.97e-07;44!UBERON:0006555;2.16e-07;15!UBERON:0004819;2.16e-07;15!UBERON:0001285;2.16e-07;15!UBERON:0007684;2.16e-07;15!UBERON:0005910;2.50e-07;6!UBERON:0005409;5.84e-07;22!UBERON:0000974;6.52e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.56e-28,160;UBERON:0000925,2.56e-28,160;UBERON:0006595,2.56e-28,160;UBERON:0001007,5.74e-22,145;UBERON:0001555,5.74e-22,145;UBERON:0007026,5.74e-22,145;UBERON:0004921,6.74e-20,118;UBERON:0001004,7.95e-19,74;UBERON:0000161,4.55e-14,36;UBERON:0005178,6.92e-13,34;UBERON:0002224,6.92e-13,34;UBERON:0000065,8.03e-13,54;UBERON:0005181,2.31e-12,35;UBERON:0001041,1.25e-11,87;UBERON:0000166,2.92e-11,22;UBERON:0005177,5.64e-11,101;UBERON:0001008,1.05e-10,48;UBERON:0005911,1.38e-10,82;UBERON:0006554,6.57e-10,47;UBERON:0007196,1.67e-09,15;UBERON:0001558,1.67e-09,15;UBERON:0004810,3.52e-09,10;UBERON:0000365,7.26e-09,5;UBERON:0000165,7.82e-09,29;UBERON:0000930,7.82e-09,29;UBERON:0005153,1.58e-08,37;UBERON:0008947,2.17e-08,38;UBERON:0003258,2.17e-08,38;UBERON:0002048,3.93e-08,22;UBERON:0000117,3.93e-08,22;UBERON:0000171,3.93e-08,22;UBERON:0000170,3.93e-08,22;UBERON:0005597,3.93e-08,22;UBERON:0000118,3.93e-08,22;UBERON:0000915,1.16e-07,52;UBERON:0005157,1.16e-07,47;UBERON:0000344,1.62e-07,20;UBERON:0004211,2.22e-07,15;UBERON:0009773,2.22e-07,15;UBERON:0001231,2.22e-07,15;UBERON:0001285,2.22e-07,15;UBERON:0007684,2.22e-07,15;UBERON:0004208,2.22e-07,15;UBERON:0005910,2.75e-07,6;UBERON:0000072,3.72e-07,47;UBERON:0009569,4.46e-07,112;UBERON:0006555,8.43e-07,16;UBERON:0004819,8.43e-07,16 | |||
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| ||
|short_description=p1@FUT3 | |short_description=p1@FUT3 | ||
}} | }} |
Latest revision as of 06:45, 20 September 2015
Short description: | p1@FUT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FUT3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000303225, ENST00000458379, NM_000149, NM_001097639, NM_001097640, NM_001097641, uc002mdj.2, uc002mdk.2, uc002mdl.2, uc002mdm.2_5end |
EntrezGene: | FUT3 |
HGNC: | 4014 |
UniProt: | P21217A8K737 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.58e-26 | 42 |
epithelial cell | 9.99e-23 | 253 |
endodermal cell | 5.34e-18 | 58 |
respiratory epithelial cell | 1.22e-16 | 13 |
epithelial cell of tracheobronchial tree | 9.13e-11 | 9 |
epithelial cell of lower respiratory tract | 9.13e-11 | 9 |
epithelial cell of alimentary canal | 2.64e-10 | 20 |
kidney tubule cell | 3.52e-09 | 10 |
nephron tubule epithelial cell | 3.52e-09 | 10 |
transitional epithelial cell | 8.33e-08 | 4 |
urothelial cell | 8.33e-08 | 4 |
epithelial cell of nephron | 2.22e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.29e-15 | 14 |
carcinoma | 1.52e-09 | 106 |