FFCP PHASE1:Hg19::chr19:5851531..5851546,-: Difference between revisions
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|id=chr19:5851531..5851546,-
|short_description=p2@FUT3
|description=CAGE_peak_2_at_FUT3_5end
|association_with_transcript=-46bp_to_ENST00000303225,ENST00000458379,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2525 | |EntrezGene=2525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4014 | |HGNC=4014 | ||
|TSSclassifier=strong | |||
|UniProt=P21217,A8K737 | |UniProt=P21217,A8K737 | ||
|association_with_transcript=-46bp_to_ENST00000303225,ENST00000458379,NM_000149,NM_001097639,NM_001097640,NM_001097641,uc002mdj.2,uc002mdk.2,uc002mdl.2,uc002mdm.2_5end | |||
|cluster_id=chr19:5851531..5851546,- | |||
|description=CAGE_peak_2_at_FUT3_5end | |||
|id=chr19:5851531..5851546,- | |||
|ontology_enrichment_celltype=CL:0002368!6.77e-16!13;CL:0002076!3.10e-14!43;CL:0000066!8.23e-14!254;CL:0000223!2.91e-10!59;CL:0002202!1.33e-08!9;CL:0002632!1.33e-08!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.28e-09,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.90e-18!14;DOID:305!1.63e-12!106;DOID:0050687!6.40e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;8.14e-12;2!DOID:1749;5.71e-09;14!DOID:3111;8.79e-07;1!DOID:3603;8.79e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,7.35e-12,2;DOID:305,3.79e-10,106;DOID:1749,5.30e-09,14;DOID:3111,8.81e-07,1;DOID:3603,8.81e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.76e-20!169;UBERON:0000925!1.76e-20!169;UBERON:0006595!1.76e-20!169;UBERON:0001007!1.60e-16!155;UBERON:0001555!1.60e-16!155;UBERON:0007026!1.60e-16!155;UBERON:0000065!2.06e-16!53;UBERON:0004921!2.79e-16!129;UBERON:0004185!2.79e-16!129;UBERON:0001004!2.44e-15!72;UBERON:0005178!5.01e-13!34;UBERON:0002224!5.01e-13!34;UBERON:0005181!1.55e-12!35;UBERON:0000464!3.87e-12!104;UBERON:0005153!2.01e-11!37;UBERON:0000466!2.11e-11!126;UBERON:0000077!7.11e-11!130;UBERON:0002048!5.79e-10!22;UBERON:0000117!5.79e-10!22;UBERON:0000171!5.79e-10!22;UBERON:0000170!5.79e-10!22;UBERON:0005597!5.79e-10!22;UBERON:0000118!5.79e-10!22;UBERON:0008947!1.04e-09!38;UBERON:0003258!1.04e-09!38;UBERON:0005911!2.34e-09!82;UBERON:0007196!2.38e-09!14;UBERON:0001558!2.38e-09!14;UBERON:0005177!7.18e-09!107;UBERON:0001041!7.52e-09!98;UBERON:0000072!8.82e-09!46;UBERON:0000058!1.44e-08!26;UBERON:0002294!1.78e-08!7;UBERON:0001173!1.78e-08!7;UBERON:0004912!1.78e-08!7;UBERON:0000915!2.57e-08!52;UBERON:0005157!2.69e-08!51;UBERON:0001723!4.17e-07!3;UBERON:0001033!4.17e-07!3;UBERON:0010056!4.17e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000058;1.51e-12;10!UBERON:0002394;2.48e-12;4!UBERON:0003928;2.48e-12;4!UBERON:0002294;6.13e-12;7!UBERON:0001173;6.13e-12;7!UBERON:0003127;8.69e-11;2!UBERON:0006562;8.69e-11;2!UBERON:0005409;3.23e-10;22!UBERON:0000160;8.23e-10;17!UBERON:0002108;9.65e-10;4!UBERON:0004921;1.86e-09;33!UBERON:0002114;1.80e-07;2!UBERON:0006947;1.80e-07;3!UBERON:0004054;1.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.50e-11,160;UBERON:0000925,1.50e-11,160;UBERON:0006595,1.50e-11,160;UBERON:0003127,7.50e-11,2;UBERON:0000160,8.45e-10,17;UBERON:0002108,1.09e-09,4;UBERON:0002294,2.56e-09,9;UBERON:0001173,2.56e-09,9;UBERON:0004912,2.56e-09,9;UBERON:0000058,6.38e-09,19;UBERON:0005409,6.42e-09,25;UBERON:0004921,1.14e-08,118;UBERON:0001007,2.18e-08,145;UBERON:0001555,2.18e-08,145;UBERON:0007026,2.18e-08,145;UBERON:0002394,2.82e-08,6;UBERON:0003928,2.82e-08,6;UBERON:0002114,2.06e-07,2;UBERON:0006947,2.42e-07,3;UBERON:0004054,2.42e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37205259772859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,1.65745780084613,0,0,0,1.35359883872224,0.231046011313244,0,0,0,0,0,0,0,0,0,1.01950509218015,0,0.447749509444357,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870389969272,1.15314040419064,0.127612712494584,2.32662895967765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,0.670302275535787,0,0.0941438007767792,0.86101074534246,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9126972881672,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0,0,0,3.6846023970404,4.83357171624145,0,0.0986434056369336,0,0,0,0,0,0,1.57427999993152,0,0.682760689712998,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,4.59979335417364,2.4441205797345,0,0,0,0,0,0,0,1.36965233252463,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.489961987071888,0.69647365264322,0,0,0,0,0,0.775912131907355,0,0.225980740780532,0,0,0,0,0.0801588202515337,1.70762395791482,0,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0.121792598380896,2.55336503108073,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70542733068293,0,0,0,0,0,1.67855409263333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47221577751538,0,0,0.346576998451015,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,1.03499260351932,0,0,0,0,0,0,0,0,1.66091155931474,0,0,0,0.227662191351298,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,8.93167125898711,3.77945567445035,0,0,0,0,0,0,0,0,0,1.05673990496671,9.02937649862952,0.218559560503957,0.470317296361523,0,0.235676547101626,0,0,0,0,0,0,0,3.03541695629618,0.705789743431384,3.45037876763424,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0661699095049,0,0,0,0,0,0,0.435433495793923,0.684466602170562,1.75115337837928,1.57788851863888,1.33064142618405,0.325613074443898,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37205259772859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,1.65745780084613,0,0,0,1.35359883872224,0.231046011313244,0,0,0,0,0,0,0,0,0,1.01950509218015,0,0.447749509444357,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870389969272,1.15314040419064,0.127612712494584,2.32662895967765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,0.670302275535787,0,0.0941438007767792,0.86101074534246,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9126972881672,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0,0,0,3.6846023970404,4.83357171624145,0,0.0986434056369336,0,0,0,0,0,0,1.57427999993152,0,0.682760689712998,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,4.59979335417364,2.4441205797345,0,0,0,0,0,0,0,1.36965233252463,0,1.18375320854817,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.489961987071888,0.69647365264322,0,0,0,0,0,0.775912131907355,0,0.225980740780532,0,0,0,0,0.0801588202515337,1.70762395791482,0,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0.121792598380896,2.55336503108073,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70542733068293,0,0,0,0,0,1.67855409263333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47221577751538,0,0,0.346576998451015,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,1.03499260351932,0,0,0,0,0,0,0,0,1.66091155931474,0,0,0,0.227662191351298,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,8.93167125898711,3.77945567445035,0,0,0,0,0,0,0,0,0,1.05673990496671,9.02937649862952,0.218559560503957,0.470317296361523,0,0.235676547101626,0,0,0,0,0,0,0,3.03541695629618,0.705789743431384,3.45037876763424,0,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0661699095049,0,0,0,0,0,0,0.435433495793923,0.684466602170562,1.75115337837928,1.57788851863888,1.33064142618405,0.325613074443898,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p2@FUT3 | |||
}} | }} |
Latest revision as of 06:46, 20 September 2015
Short description: | p2@FUT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FUT3_5end |
Coexpression cluster: | NA |
Association with transcript: | -46bp_to_ENST00000303225, ENST00000458379, NM_000149, NM_001097639, NM_001097640, NM_001097641, uc002mdj.2, uc002mdk.2, uc002mdl.2, uc002mdm.2_5end |
EntrezGene: | FUT3 |
HGNC: | 4014 |
UniProt: | P21217A8K737 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.28e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.50e-11 | 160 |
endoderm | 1.50e-11 | 160 |
presumptive endoderm | 1.50e-11 | 160 |
open tracheal system trachea | 7.50e-11 | 2 |
intestine | 8.45e-10 | 17 |
small intestine | 1.09e-09 | 4 |
biliary system | 2.56e-09 | 9 |
biliary tree | 2.56e-09 | 9 |
biliary bud | 2.56e-09 | 9 |
duct | 6.38e-09 | 19 |
gastrointestinal system | 6.42e-09 | 25 |
subdivision of digestive tract | 1.14e-08 | 118 |
digestive system | 2.18e-08 | 145 |
digestive tract | 2.18e-08 | 145 |
primitive gut | 2.18e-08 | 145 |
bile duct | 2.82e-08 | 6 |
digestive system duct | 2.82e-08 | 6 |
duodenum | 2.06e-07 | 2 |
male genital duct | 2.42e-07 | 3 |
internal male genitalia | 2.42e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 7.35e-12 | 2 |
carcinoma | 3.79e-10 | 106 |
squamous cell carcinoma | 5.30e-09 | 14 |
cystadenocarcinoma | 8.81e-07 | 1 |
mucinous cystadenocarcinoma | 8.81e-07 | 1 |