FFCP PHASE1:Hg19::chr4:106816320..106816337,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255743 | |EntrezGene=255743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27405 | |HGNC=27405 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXI9 | |UniProt=Q6UXI9 | ||
|association_with_transcript=-256bp_to_ENST00000379987_5end | |association_with_transcript=-256bp_to_ENST00000379987_5end | ||
|cluster_id=chr4:106816320..106816337,+ | |||
|description=CAGE_peak_9_at_NPNT_5end | |description=CAGE_peak_9_at_NPNT_5end | ||
|id=chr4:106816320..106816337,+ | |id=chr4:106816320..106816337,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;9.86e-18;2!CL:0000242;9.86e-18;2!CL:0002327;1.12e-09;4!CL:0000312;6.78e-08;5!CL:0000240;8.72e-07;6!CL:0000311;8.72e-07;6!CL:0000079;8.72e-07;6!CL:0000237;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,9.07e-18,2;CL:0002327,1.12e-09,4;CL:0000312,6.55e-08,5;CL:0000240,8.48e-07,6;CL:0000311,8.48e-07,6;CL:0000079,8.48e-07,6;CL:0000237,8.48e-07,6;CL:0000036,8.48e-07,6;CL:0000357,8.48e-07,6;CL:0000114,8.48e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.84e-34;1!CL:0000357;8.72e-07;6!CL:0000114;8.72e-07;6 | |||
|ontology_enrichment_disease=DOID:305!2.63e-14!106;DOID:0050687!6.05e-09!143;DOID:5093!9.52e-09!4;DOID:1612!9.52e-09!4;DOID:299!3.92e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;4.28e-34;4!DOID:1612;4.28e-34;4!DOID:4362;6.78e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.28e-34,4;DOID:1612,4.28e-34,4;DOID:4362,7.01e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.18e-29!9;UBERON:0001557!5.68e-19!19;UBERON:0004119!3.09e-12!169;UBERON:0000925!3.09e-12!169;UBERON:0006595!3.09e-12!169;UBERON:0001007!5.41e-12!155;UBERON:0001555!5.41e-12!155;UBERON:0007026!5.41e-12!155;UBERON:0000065!2.19e-10!53;UBERON:0008947!4.14e-10!38;UBERON:0003258!4.14e-10!38;UBERON:0004921!3.98e-09!129;UBERON:0004185!3.98e-09!129;UBERON:0001004!5.30e-09!72;UBERON:0000077!3.22e-08!130;UBERON:0000072!1.06e-07!46;UBERON:0007023!1.27e-07!115;UBERON:0000369!2.16e-07!4;UBERON:0002435!2.16e-07!4;UBERON:0000204!2.16e-07!4;UBERON:0010082!2.16e-07!4 | |ontology_enrichment_uberon=UBERON:0001737!2.18e-29!9;UBERON:0001557!5.68e-19!19;UBERON:0004119!3.09e-12!169;UBERON:0000925!3.09e-12!169;UBERON:0006595!3.09e-12!169;UBERON:0001007!5.41e-12!155;UBERON:0001555!5.41e-12!155;UBERON:0007026!5.41e-12!155;UBERON:0000065!2.19e-10!53;UBERON:0008947!4.14e-10!38;UBERON:0003258!4.14e-10!38;UBERON:0004921!3.98e-09!129;UBERON:0004185!3.98e-09!129;UBERON:0001004!5.30e-09!72;UBERON:0000077!3.22e-08!130;UBERON:0000072!1.06e-07!46;UBERON:0007023!1.27e-07!115;UBERON:0000369!2.16e-07!4;UBERON:0002435!2.16e-07!4;UBERON:0000204!2.16e-07!4;UBERON:0010082!2.16e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.49e-14;10!UBERON:0001443;4.00e-13;11!UBERON:0001911;1.12e-09;4!UBERON:0000002;8.72e-07;6!UBERON:0001560;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.49e-14,10;UBERON:0001443,4.00e-13,11;UBERON:0001911,1.12e-09,4;UBERON:0005333,1.12e-09,4;UBERON:0008425,1.12e-09,4;UBERON:0005311,1.12e-09,4;UBERON:0000002,8.97e-07,6;UBERON:0001560,8.97e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.505754070234305,0.482022059766964,0.441175890929576,0.435758888184812,0.474541238222193,1.48314438976181,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3438498497671,4.023159999825,0,0.1137934482855,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,1.11538995422883,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.426905989478705,0.39961921916426,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,1.04909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.151557396436479,0,0,0,0,0.952257725854961,0,0.0620747142958579,0,0.891060215894309,0.606351566874658,0,0,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.505754070234305,0.482022059766964,0.441175890929576,0.435758888184812,0.474541238222193,1.48314438976181,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3438498497671,4.023159999825,0,0.1137934482855,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,1.11538995422883,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.426905989478705,0.39961921916426,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,1.04909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.151557396436479,0,0,0,0,0.952257725854961,0,0.0620747142958579,0,0.891060215894309,0.606351566874658,0,0,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p9@NPNT | |short_description=p9@NPNT | ||
}} | }} |
Latest revision as of 06:48, 20 September 2015
Short description: | p9@NPNT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NPNT_5end |
Coexpression cluster: | NA |
Association with transcript: | -256bp_to_ENST00000379987_5end |
EntrezGene: | NPNT |
HGNC: | 27405 |
UniProt: | Q6UXI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 9.07e-18 | 2 |
mammary gland epithelial cell | 1.12e-09 | 4 |
keratinocyte | 6.55e-08 | 5 |
stratified squamous epithelial cell | 8.48e-07 | 6 |
keratin accumulating cell | 8.48e-07 | 6 |
stratified epithelial cell | 8.48e-07 | 6 |
keratinizing barrier epithelial cell | 8.48e-07 | 6 |
epithelial fate stem cell | 8.48e-07 | 6 |
stratified epithelial stem cell | 8.48e-07 | 6 |
surface ectodermal cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
breast | 2.49e-14 | 10 |
chest | 4.00e-13 | 11 |
mammary gland | 1.12e-09 | 4 |
mammary bud | 1.12e-09 | 4 |
mammary ridge | 1.12e-09 | 4 |
mammary placode | 1.12e-09 | 4 |
uterine cervix | 8.97e-07 | 6 |
neck of organ | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.28e-34 | 4 |
breast cancer | 4.28e-34 | 4 |
cervical cancer | 7.01e-08 | 5 |