FFCP PHASE1:Hg19::chr11:7597752..7597757,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8495 | |EntrezGene=8495 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9250 | |HGNC=9250 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-240bp_to_ENST00000532926,uc001mfk.1,uc010rbb.1,uc010rbc.1_5end | |association_with_transcript=-240bp_to_ENST00000532926,uc001mfk.1,uc010rbb.1,uc010rbc.1_5end | ||
|cluster_id=chr11:7597752..7597757,+ | |||
|coexpression_cluster_id=C42 | |coexpression_cluster_id=C42 | ||
|description=CAGE_peak_38_at_PPFIBP2_5end | |description=CAGE_peak_38_at_PPFIBP2_5end | ||
|id=chr11:7597752..7597757,+ | |id=chr11:7597752..7597757,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.76e-15!4;CL:0000062!3.13e-12!11;CL:0000375!3.13e-12!11;CL:0000335!3.13e-12!11;CL:0002253!1.29e-08!2;CL:0000035!5.68e-07!20 | |ontology_enrichment_celltype=CL:0002563!2.76e-15!4;CL:0000062!3.13e-12!11;CL:0000375!3.13e-12!11;CL:0000335!3.13e-12!11;CL:0002253!1.29e-08!2;CL:0000035!5.68e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0002253;5.04e-34;2!CL:0002563;8.69e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,5.04e-34,2;CL:0002563,8.69e-18,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!8.63e-16!1;DOID:1357!8.63e-16!1;DOID:4929!1.86e-08!2;DOID:3493!2.67e-08!2 | |ontology_enrichment_disease=DOID:0050619!8.63e-16!1;DOID:1357!8.63e-16!1;DOID:4929!1.86e-08!2;DOID:3493!2.67e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001764!8.63e-16!1;UBERON:0001825!8.63e-16!1;UBERON:0001301!1.78e-15!1;UBERON:0001242!2.76e-15!4;UBERON:0001262!2.76e-15!4;UBERON:0004786!2.76e-15!4;UBERON:0004808!2.76e-15!4;UBERON:0001277!2.76e-15!4;UBERON:0003350!2.00e-12!5;UBERON:0000485!2.68e-07!9 | |ontology_enrichment_uberon=UBERON:0001764!8.63e-16!1;UBERON:0001825!8.63e-16!1;UBERON:0001301!1.78e-15!1;UBERON:0001242!2.76e-15!4;UBERON:0001262!2.76e-15!4;UBERON:0004786!2.76e-15!4;UBERON:0004808!2.76e-15!4;UBERON:0001277!2.76e-15!4;UBERON:0003350!2.00e-12!5;UBERON:0000485!2.68e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;8.69e-18;4!UBERON:0001242;8.69e-18;4!UBERON:0001262;8.69e-18;4!UBERON:0004786;8.69e-18;4!UBERON:0004808;8.69e-18;4!UBERON:0001277;8.69e-18;4!UBERON:0004907;1.60e-14;5!UBERON:0000485;8.99e-11;7!UBERON:0003929;8.99e-11;7!UBERON:0001871;9.89e-11;6!UBERON:0003350;1.35e-09;8!UBERON:0001155;1.12e-08;9!UBERON:0000059;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,8.69e-18,4;UBERON:0001242,8.69e-18,4;UBERON:0001262,8.69e-18,4;UBERON:0004786,8.69e-18,4;UBERON:0004808,8.69e-18,4;UBERON:0001277,8.69e-18,4;UBERON:0004907,1.60e-14,5;UBERON:0001871,9.89e-11,6;UBERON:0003350,1.35e-09,8;UBERON:0001155,1.12e-08,9;UBERON:0000485,1.12e-08,9;UBERON:0000059,2.47e-07,11 | |||
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|short_description=p38@PPFIBP2 | |short_description=p38@PPFIBP2 | ||
}} | }} |
Latest revision as of 07:14, 20 September 2015
Short description: | p38@PPFIBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_PPFIBP2_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | -240bp_to_ENST00000532926, uc001mfk.1, uc010rbb.1, uc010rbc.1_5end |
EntrezGene: | PPFIBP2 |
HGNC: | 9250 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 5.04e-34 | 2 |
intestinal epithelial cell | 8.69e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 8.69e-18 | 4 |
intestinal mucosa | 8.69e-18 | 4 |
wall of intestine | 8.69e-18 | 4 |
gastrointestinal system mucosa | 8.69e-18 | 4 |
gastrointestinal system epithelium | 8.69e-18 | 4 |
intestinal epithelium | 8.69e-18 | 4 |
lower digestive tract | 1.60e-14 | 5 |
temporal lobe | 9.89e-11 | 6 |
epithelium of mucosa | 1.35e-09 | 8 |
colon | 1.12e-08 | 9 |
simple columnar epithelium | 1.12e-08 | 9 |
large intestine | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |