FFCP PHASE1:Hg19::chr11:100558010..100558029,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=143872 | |EntrezGene=143872 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26545 | |HGNC=26545 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJK4 | |UniProt=E9PJK4 | ||
|association_with_transcript=-354bp_to_ENST00000524892_5end | |association_with_transcript=-354bp_to_ENST00000524892_5end | ||
|cluster_id=chr11:100558010..100558029,+ | |||
|coexpression_cluster_id=C3067 | |coexpression_cluster_id=C3067 | ||
|description=CAGE_peak_1_at_ARHGAP42_5end | |description=CAGE_peak_1_at_ARHGAP42_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!6.56e-20!347;UBERON:0007023!4.37e-19!115;UBERON:0001017!3.77e-18!82;UBERON:0005743!2.27e-17!86;UBERON:0000073!5.34e-16!94;UBERON:0001016!5.34e-16!94;UBERON:0000955!8.77e-15!69;UBERON:0006238!8.77e-15!69;UBERON:0000477!1.68e-14!286;UBERON:0001049!2.30e-13!57;UBERON:0005068!2.30e-13!57;UBERON:0006241!2.30e-13!57;UBERON:0007135!2.30e-13!57;UBERON:0002616!5.07e-13!59;UBERON:0004111!1.97e-12!241;UBERON:0000483!6.29e-12!309;UBERON:0000119!9.29e-12!312;UBERON:0000025!1.01e-11!194;UBERON:0000153!1.09e-11!129;UBERON:0007811!1.09e-11!129;UBERON:0004121!2.15e-11!169;UBERON:0000033!3.15e-11!123;UBERON:0003075!4.73e-11!86;UBERON:0007284!4.73e-11!86;UBERON:0000475!8.08e-11!365;UBERON:0000922!8.64e-11!612;UBERON:0003080!1.41e-10!42;UBERON:0000062!2.57e-10!511;UBERON:0000924!3.16e-10!173;UBERON:0006601!3.16e-10!173;UBERON:0002780!3.80e-10!41;UBERON:0001890!3.80e-10!41;UBERON:0006240!3.80e-10!41;UBERON:0000468!4.63e-10!659;UBERON:0002346!2.03e-09!90;UBERON:0000467!5.61e-09!625;UBERON:0000480!9.92e-09!626;UBERON:0002020!1.40e-08!34;UBERON:0003528!1.40e-08!34;UBERON:0002050!1.71e-08!605;UBERON:0005423!1.71e-08!605;UBERON:0001893!2.16e-08!34;UBERON:0002791!2.40e-08!33;UBERON:0000923!3.50e-08!604;UBERON:0005291!3.50e-08!604;UBERON:0006598!3.50e-08!604;UBERON:0002532!3.50e-08!604;UBERON:0001869!6.85e-08!32;UBERON:0003056!1.18e-07!61;UBERON:0003104!1.83e-07!238;UBERON:0009142!1.83e-07!238 | |ontology_enrichment_uberon=UBERON:0000481!6.56e-20!347;UBERON:0007023!4.37e-19!115;UBERON:0001017!3.77e-18!82;UBERON:0005743!2.27e-17!86;UBERON:0000073!5.34e-16!94;UBERON:0001016!5.34e-16!94;UBERON:0000955!8.77e-15!69;UBERON:0006238!8.77e-15!69;UBERON:0000477!1.68e-14!286;UBERON:0001049!2.30e-13!57;UBERON:0005068!2.30e-13!57;UBERON:0006241!2.30e-13!57;UBERON:0007135!2.30e-13!57;UBERON:0002616!5.07e-13!59;UBERON:0004111!1.97e-12!241;UBERON:0000483!6.29e-12!309;UBERON:0000119!9.29e-12!312;UBERON:0000025!1.01e-11!194;UBERON:0000153!1.09e-11!129;UBERON:0007811!1.09e-11!129;UBERON:0004121!2.15e-11!169;UBERON:0000033!3.15e-11!123;UBERON:0003075!4.73e-11!86;UBERON:0007284!4.73e-11!86;UBERON:0000475!8.08e-11!365;UBERON:0000922!8.64e-11!612;UBERON:0003080!1.41e-10!42;UBERON:0000062!2.57e-10!511;UBERON:0000924!3.16e-10!173;UBERON:0006601!3.16e-10!173;UBERON:0002780!3.80e-10!41;UBERON:0001890!3.80e-10!41;UBERON:0006240!3.80e-10!41;UBERON:0000468!4.63e-10!659;UBERON:0002346!2.03e-09!90;UBERON:0000467!5.61e-09!625;UBERON:0000480!9.92e-09!626;UBERON:0002020!1.40e-08!34;UBERON:0003528!1.40e-08!34;UBERON:0002050!1.71e-08!605;UBERON:0005423!1.71e-08!605;UBERON:0001893!2.16e-08!34;UBERON:0002791!2.40e-08!33;UBERON:0000923!3.50e-08!604;UBERON:0005291!3.50e-08!604;UBERON:0006598!3.50e-08!604;UBERON:0002532!3.50e-08!604;UBERON:0001869!6.85e-08!32;UBERON:0003056!1.18e-07!61;UBERON:0003104!1.83e-07!238;UBERON:0009142!1.83e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.42e-08;41!UBERON:0001890;2.42e-08;41!UBERON:0002791;4.59e-08;32!UBERON:0003528;7.13e-08;34!UBERON:0002020;7.13e-08;34!UBERON:0001017;8.46e-08;75!UBERON:0001869;9.06e-08;32!UBERON:0005409;1.07e-07;22!UBERON:0001893;1.31e-07;34!UBERON:0000073;3.00e-07;53!UBERON:0002616;3.00e-07;53!UBERON:0000922;6.66e-07;49!UBERON:0000160;7.50e-07;17!UBERON:0000955;8.01e-07;68 | |ontology_enrichment_uberon_v019=UBERON:0002780;2.42e-08;41!UBERON:0001890;2.42e-08;41!UBERON:0002791;4.59e-08;32!UBERON:0003528;7.13e-08;34!UBERON:0002020;7.13e-08;34!UBERON:0001017;8.46e-08;75!UBERON:0001869;9.06e-08;32!UBERON:0005409;1.07e-07;22!UBERON:0001893;1.31e-07;34!UBERON:0000073;3.00e-07;53!UBERON:0002616;3.00e-07;53!UBERON:0000922;6.66e-07;49!UBERON:0000160;7.50e-07;17!UBERON:0000955;8.01e-07;68 | ||
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| ||
|short_description=p1@ARHGAP42 | |short_description=p1@ARHGAP42 | ||
}} | }} |
Latest revision as of 07:35, 20 September 2015
Short description: | p1@ARHGAP42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGAP42_5end |
Coexpression cluster: | C3067_medulloblastoma_lung_placenta_renal_retina_gall_rectum |
Association with transcript: | -354bp_to_ENST00000524892_5end |
EntrezGene: | ARHGAP42 |
HGNC: | 26545 |
UniProt: | E9PJK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data