FFCP PHASE1:Hg19::chr7:100770399..100770412,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:100770399..100770412,+ to FFCP PHASE1:Hg19::chr7:100770399..100770412,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5054 | |EntrezGene=5054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8583 | |HGNC=8583 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_uc003uxs.2_5end | |||
|cluster_id=chr7:100770399..100770412,+ | |||
|coexpression_cluster_id=C301 | |||
|description=CAGE_peak_6_at_SERPINE1_5end | |||
|id=chr7:100770399..100770412,+ | |||
|ontology_enrichment_celltype=CL:0000222!5.41e-33!119;CL:0000144!2.23e-28!625;CL:0000055!7.71e-27!180;CL:0002371!4.68e-25!591;CL:0000548!1.37e-21!679;CL:0000004!1.37e-21!679;CL:0000255!1.37e-21!679;CL:0000220!2.08e-21!246;CL:0000012!7.37e-21!682;CL:0002321!9.78e-21!248;CL:0000680!1.20e-18!57;CL:0000056!1.20e-18!57;CL:0000355!1.20e-18!57;CL:0000192!3.42e-18!42;CL:0000514!3.42e-18!42;CL:0000183!3.73e-18!59;CL:0000187!1.28e-17!54;CL:0000359!3.28e-16!32;CL:0000393!1.21e-15!60;CL:0000211!1.21e-15!60;CL:0000057!7.09e-15!75;CL:0000213!1.93e-14!57;CL:0000215!1.93e-14!57;CL:0000003!1.95e-12!722;CL:0002139!1.62e-11!24;CL:0000723!1.07e-10!436;CL:0000048!1.12e-10!430;CL:0000115!2.60e-10!35;CL:0000034!1.46e-09!444;CL:0002078!1.94e-09!44;CL:0000071!5.16e-09!18;CL:0002546!5.16e-09!18;CL:0000076!4.59e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.36e-19;32!CL:0000192;2.45e-14;43!CL:0002139;4.98e-12;24!CL:0000134;1.23e-10;55!CL:0000187;3.94e-10;55!CL:0000115;8.11e-10;36!CL:0000723;4.86e-09;61!CL:0000071;7.46e-09;18!CL:0000048;7.84e-09;58!CL:0000213;1.17e-08;58!CL:0000215;1.17e-08;58!CL:0002539;2.77e-08;10!CL:0000393;3.27e-07;61!CL:0000211;3.27e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.55e-31,121;CL:0000359,4.86e-21,32;CL:0000192,2.22e-19,43;CL:0000514,2.22e-19,43;CL:0000680,1.39e-18,58;CL:0000056,1.39e-18,58;CL:0000355,1.39e-18,58;CL:0000187,2.73e-17,55;CL:0002321,7.20e-15,250;CL:0000213,2.41e-14,58;CL:0000215,2.41e-14,58;CL:0000393,4.30e-14,61;CL:0000211,4.30e-14,61;CL:0000048,1.43e-12,427;CL:0000723,2.19e-12,433;CL:0002139,7.31e-12,24;CL:0000034,2.50e-11,441;CL:0000115,6.84e-11,36;CL:0000057,1.84e-10,76;CL:0000071,1.21e-08,18;CL:0002546,1.21e-08,18;CL:0002539,2.70e-08,10;CL:0002078,3.33e-08,45 | |||
|ontology_enrichment_development_v019=CL:0000514;2.45e-14;43!CL:0000355;1.41e-10;58!CL:0002546;7.46e-09;18!CL:0000222;1.20e-08;121 | |||
|ontology_enrichment_disease=DOID:2394!2.25e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.50e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.05e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!5.67e-30!79;UBERON:0007798!5.67e-30!79;UBERON:0003914!1.25e-29!118;UBERON:0000055!1.04e-28!69;UBERON:0004872!5.02e-28!84;UBERON:0001981!2.88e-26!60;UBERON:0007500!2.88e-26!60;UBERON:0004537!2.88e-26!60;UBERON:0006965!2.88e-26!60;UBERON:0004535!8.02e-23!110;UBERON:0001637!4.98e-22!42;UBERON:0003509!4.98e-22!42;UBERON:0004572!4.98e-22!42;UBERON:0000490!1.21e-21!138;UBERON:0001009!3.71e-21!113;UBERON:0005256!6.17e-21!143;UBERON:0000914!2.01e-19!83;UBERON:0002329!2.01e-19!83;UBERON:0003077!2.01e-19!83;UBERON:0003059!2.01e-19!83;UBERON:0007282!2.01e-19!83;UBERON:0009618!2.01e-19!83;UBERON:0007285!2.01e-19!83;UBERON:0000486!2.62e-19!82;UBERON:0004290!6.91e-19!70;UBERON:0004573!1.63e-17!33;UBERON:0004571!1.63e-17!33;UBERON:0001134!2.21e-16!61;UBERON:0002036!2.21e-16!61;UBERON:0003082!2.21e-16!61;UBERON:0002100!5.84e-16!216;UBERON:0002385!4.25e-15!63;UBERON:0001015!4.25e-15!63;UBERON:0000383!4.25e-15!63;UBERON:0000119!2.03e-13!312;UBERON:0000483!2.63e-13!309;UBERON:0000947!6.40e-11!21;UBERON:0010191!6.40e-11!21;UBERON:0000926!6.77e-10!448;UBERON:0004120!6.77e-10!448;UBERON:0006603!6.77e-10!448;UBERON:0000487!1.31e-09!22;UBERON:0001986!5.16e-09!18;UBERON:0004638!5.16e-09!18;UBERON:0004852!5.16e-09!18;UBERON:0003081!5.49e-09!216;UBERON:0000467!6.90e-09!625;UBERON:0006914!8.21e-09!25;UBERON:0000480!9.96e-09!626;UBERON:0000025!2.04e-08!194;UBERON:0003104!2.22e-08!238;UBERON:0009142!2.22e-08!238;UBERON:0000468!2.78e-08!659;UBERON:0000475!4.10e-08!365;UBERON:0004111!4.23e-08!241;UBERON:0000477!1.08e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.16e-19;42!UBERON:0003509;7.16e-19;42!UBERON:0004572;7.16e-19;42!UBERON:0004573;1.04e-18;33!UBERON:0004571;1.04e-18;33!UBERON:0007500;1.42e-16;56!UBERON:0001981;1.42e-16;56!UBERON:0004537;1.42e-16;56!UBERON:0000055;8.38e-16;65!UBERON:0003914;5.86e-14;74!UBERON:0002049;7.39e-13;75!UBERON:0007798;7.39e-13;75!UBERON:0000947;5.47e-12;21!UBERON:0010191;5.47e-12;21!UBERON:0000487;5.31e-10;22!UBERON:0006914;7.20e-09;25!UBERON:0004638;7.46e-09;18!UBERON:0001986;7.46e-09;18!UBERON:0004852;7.46e-09;18!UBERON:0004237;2.77e-08;10!UBERON:0004695;2.77e-08;10!UBERON:0002111;2.77e-08;10!UBERON:0004178;2.77e-08;10!UBERON:0000025;2.97e-07;93!UBERON:0004535;6.43e-07;109!UBERON:0001009;7.74e-07;112 | |||
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|phase1_expression=4.36028110249336,2.99740733447376,7.61153782118244,2.00146596706261,1.78784437770915,1.74467704820074,30.3959853801973,24.6370750636464,0,19.1672470471177,1.39560233594486,3.9319446983431,0.263766978228454,0.123766352960047,1.32558950291166,8.74022690387308,3.61616716814386,5.11217063271161,10.7345215733912,0.246242116153576,1.02000345622126,0.313454721478088,0.286235987131057,0.410623275218653,2.51085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,1.13362783106643,1.21292030593908,0,0.822335776043652,0.309706370895104,0,0,0,0,1.93645405075148,1.35426486594342,0.376484679085209,0.545812300115692,1.79778787556068,0.612167784741805,1.28371610830437,0,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0,0.736555271975129,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,4.87613732627923,0,2.55725123687061,0.722878304769133,5.51471701699479,0.434539556882471,1.5905718941022,0.486634870302636,0.756278537312543,0.443458794925128,0.527008714158756,0,2.5500670180478,0,0,0,0.132957960518865,0,0,0,0.993812036833525,12.9035189265919,16.6627440771645,1.13061588384802,40.271945876151,3.02629846134074,7.31482382878837,2.58416759169329,2.13459757612026,3.68192674041137,15.3075140501476,12.1643536914962,4.88124115096339,2.20597848207521,15.3926970097534,0.892997282840798,0.673588117878509,2.13961812918312,6.13266549863533,16.1375162126582,3.48083313467774,0,0,2.18047026071267,10.933382937297,9.11739683984974,7.67973248716669,7.74458876021797,2.83734705758686,12.3349072031308,25.6197589751292,9.62003438826924,0.622422070799533,2.82892411346345,2.12500474047496,0.454072282934794,4.60940739583999,3.04617861383936,18.4174445329889,13.1208518955223,3.58676833324323,0.352303495931295,0.485618833104395,0.561803226808994,0.204154171254893,0.122834317311768,0.206651562351531,0,0,2.73048408581408,2.15585442544872,0.168336113954066,0.125118519871964,0.277064115484183,3.95079858792754,1.5324389789951,0.751190294532984,4.3104229600808,0.89694817844431,2.98980344345994,7.41761654058466,0.900273288253207,0.618315175430633,0.257640540045629,5.02515512095292,4.38818463827292,3.31285817548075,0.252433774244115,1.28869858099219,0.484938170456436,1.06502877754984,2.21654616100809,4.91725717700414,1.73934767846967,1.09098448236334,0.573609190778008,0,0,0,0,0.504641701751257,0,15.6449532329816,1.28648187638577,1.38134921352481,4.17931135228781,2.88751792667834,0,0,0,0,0,0,0,0,0,0.738155454624648,32.2556079747925,5.7620361586396,10.2906097969879,1.26755034821831,2.94848165003288,2.36315962672562,0,0,2.23038153388083,1.20725313949488,1.1240175325762,0.402115889646523,0.185176890317059,1.62904152655162,2.07986957055916,7.21656710126366,0.115930404975077,1.87853910777315,7.65142173133691,5.55582615091933,3.99533719692656,0,0,0,0.234004265139238,0,0,16.798212819886,2.41017665312057,0.447792613514241,1.16253575405585,0.766765358330422,0,0,0.829312462163088,0.432359860250884,1.13618190083742,0.063497894292169,0,0,0,1.43958489784653,0,0,0.448524337381443,0,3.3735611477637,3.87815147273333,3.57656445851882,10.143633030672,4.78688609852767,1.04007436911366,4.11531798819427,4.25547396069835,2.66422179016099,6.43400971461664,4.88359444852299,0,3.90883421152482,1.42156779497018,26.9263636797366,25.3209076730052,12.2014684204041,11.7968129594827,0,0,0,7.90762023122223,0,0,5.79125226670317,1.02738161275192,3.58121926479791,0.336255431980582,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.831883446123229,3.39015078714607,1.89242898040722,1.87426263988341,3.31040709700491,2.27407504055985,1.03473071292505,3.98535359121262,0.368738337083406,1.04260337361699,0.979005787313703,0,0,0.431428401637234,0.106727557803444,0.303127571446259,11.6504807657348,0.604780586659361,8.18755765801964,1.84154367945675,0.561320188866147,8.71346214938766,2.04682899626681,10.1337970320473,1.48418066444991,0.771048469013278,8.5229628150301,1.56041596426237,0.519254429183621,0.813472649219715,0,7.61924587152482,0.184161977871793,1.60740227430449,0.364182336013434,0.262248829918848,1.80479845162965,1.07821471946181,3.13739907670742,1.46139224653261,1.37217117560738,0,1.87103075804167,9.93213214069841,16.9649977959318,7.04460737614017,3.51182841698397,0.764628819135115,0,0.447749509444357,0,0,0,0.984043937099117,2.27764876265012,2.06082023295445,0,0,0.574265537996172,0,27.3162680735071,1.45006077438183,0.308097234229289,1.22802939780904,1.65403886981437,0.751941714077915,0.290033387828457,1.36362603865761,0.534192213880424,4.46269271474641,2.30628080838127,1.14851441245126,0.910420027699949,4.18360994367557,19.203553156669,3.485186350803,7.08477234405004,2.66153015158511,9.5692629128258,18.532421910392,4.8662461492277,0,1.58189712359363,4.76575484809562,11.7712984003214,0,3.81843897511124,4.70969184119538,0.899362287916574,0.54907405947211,1.41374882814824,6.06547444719948,3.17020642346017,7.58265221230166,7.31450608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| ||
|short_description=p6@SERPINE1 | |||
}} | }} |
Latest revision as of 15:33, 24 September 2015
Short description: | p6@SERPINE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SERPINE1_5end |
Coexpression cluster: | C301_Smooth_mesenchymal_Endothelial_Hepatic_basal_hepatic_chorionic |
Association with transcript: | 14bp_to_uc003uxs.2_5end |
EntrezGene: | SERPINE1 |
HGNC: | 8583 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.55e-31 | 121 |
vascular associated smooth muscle cell | 4.86e-21 | 32 |
smooth muscle cell | 2.22e-19 | 43 |
smooth muscle myoblast | 2.22e-19 | 43 |
muscle precursor cell | 1.39e-18 | 58 |
myoblast | 1.39e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-18 | 58 |
muscle cell | 2.73e-17 | 55 |
embryonic cell | 7.20e-15 | 250 |
lining cell | 2.41e-14 | 58 |
barrier cell | 2.41e-14 | 58 |
electrically responsive cell | 4.30e-14 | 61 |
electrically active cell | 4.30e-14 | 61 |
multi fate stem cell | 1.43e-12 | 427 |
somatic stem cell | 2.19e-12 | 433 |
endothelial cell of vascular tree | 7.31e-12 | 24 |
stem cell | 2.50e-11 | 441 |
endothelial cell | 6.84e-11 | 36 |
fibroblast | 1.84e-10 | 76 |
blood vessel endothelial cell | 1.21e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.21e-08 | 18 |
aortic smooth muscle cell | 2.70e-08 | 10 |
meso-epithelial cell | 3.33e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.05e-08 | 14 |